Fyttd1 (forty-two-three domain containing 1) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Fyttd1 (forty-two-three domain containing 1) Rattus norvegicus
Analyze
Symbol: Fyttd1
Name: forty-two-three domain containing 1
RGD ID: 1306899
Description: Predicted to enable mRNA binding activity. Predicted to be involved in mRNA export from nucleus. Predicted to be located in nucleoplasm. Predicted to be active in nuclear speck. Orthologous to human FYTTD1 (forty-two-three domain containing 1); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Ac1176; forty-two-three domain-containing protein 1; LOC360726; protein 40-2-3; RGD1306899; similar to putative 40-2-3 protein; UAP56-interacting factor
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81181,383,040 - 81,412,604 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1181,383,040 - 81,412,599 (-)EnsemblGRCr8
mRatBN7.21167,877,967 - 67,907,500 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1167,877,967 - 67,907,511 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1176,715,042 - 76,744,553 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01169,376,848 - 69,406,350 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01168,404,140 - 68,433,652 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01171,113,931 - 71,136,694 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1171,116,579 - 71,136,673 (-)Ensemblrn6Rnor6.0
Rnor_5.01174,198,837 - 74,221,579 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41169,700,526 - 69,720,622 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1167,321,655 - 67,344,481 (-)NCBICelera
RGSC_v3.11169,757,101 - 69,785,168 (-)NCBI
Cytogenetic Map11q22NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
mRNA export from nucleus  (IBA,IEA,ISO,ISS)
mRNA transport  (IEA)

Cellular Component
nuclear speck  (IBA,IEA,ISO,ISS)
nucleoplasm  (IEA,ISO,ISS)

Molecular Function
mRNA binding  (IBA,IEA,ISO,ISS)
protein binding  (ISO)
RNA binding  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19836239   PMID:22681889  


Genomics

Comparative Map Data
Fyttd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81181,383,040 - 81,412,604 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1181,383,040 - 81,412,599 (-)EnsemblGRCr8
mRatBN7.21167,877,967 - 67,907,500 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1167,877,967 - 67,907,511 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1176,715,042 - 76,744,553 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01169,376,848 - 69,406,350 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01168,404,140 - 68,433,652 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01171,113,931 - 71,136,694 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1171,116,579 - 71,136,673 (-)Ensemblrn6Rnor6.0
Rnor_5.01174,198,837 - 74,221,579 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41169,700,526 - 69,720,622 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1167,321,655 - 67,344,481 (-)NCBICelera
RGSC_v3.11169,757,101 - 69,785,168 (-)NCBI
Cytogenetic Map11q22NCBI
FYTTD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383197,749,533 - 197,787,596 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3197,737,179 - 197,787,596 (+)Ensemblhg38GRCh38
GRCh373197,476,404 - 197,514,467 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363198,961,080 - 198,995,584 (+)NCBIBuild 36Build 36hg18NCBI36
Build 343198,964,992 - 198,999,494NCBI
Celera3196,093,531 - 196,127,401 (+)NCBICelera
Cytogenetic Map3q29NCBI
HuRef3194,779,250 - 194,814,124 (+)NCBIHuRef
CHM1_13197,447,306 - 197,482,219 (+)NCBICHM1_1
T2T-CHM13v2.03200,481,909 - 200,519,978 (+)NCBIT2T-CHM13v2.0
Fyttd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391632,697,762 - 32,729,333 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1632,697,870 - 32,729,245 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381632,877,581 - 32,908,963 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1632,877,500 - 32,908,875 (+)Ensemblmm10GRCm38
MGSCv371632,877,870 - 32,909,049 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361632,797,587 - 32,828,622 (+)NCBIMGSCv36mm8
Celera1633,357,044 - 33,388,228 (+)NCBICelera
Cytogenetic Map16B3NCBI
cM Map1623.43NCBI
Fyttd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542012,097,373 - 12,123,644 (-)Ensembl
ChiLan1.0NW_00495542012,095,055 - 12,123,900 (-)NCBIChiLan1.0ChiLan1.0
FYTTD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22195,663,480 - 195,699,239 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13195,671,286 - 195,707,045 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03195,166,837 - 195,201,886 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13205,049,920 - 205,084,249 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3205,049,785 - 205,084,249 (+)EnsemblpanPan2panpan1.1
FYTTD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13328,920,361 - 28,947,111 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3328,920,361 - 28,945,707 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3328,941,718 - 28,968,373 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03329,149,253 - 29,179,308 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3329,147,874 - 29,177,871 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13328,948,213 - 28,974,642 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03328,994,323 - 29,020,942 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03329,614,369 - 29,641,032 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Fyttd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602125,501,502 - 125,541,081 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936784344,574 - 370,056 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936784344,564 - 370,088 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FYTTD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13134,363,682 - 134,402,630 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.113134,363,646 - 134,402,632 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213143,957,646 - 143,995,325 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FYTTD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11591,468,378 - 91,498,836 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1591,469,033 - 91,500,059 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604165,412,718 - 65,445,227 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fyttd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473061,015,709 - 61,040,805 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Fyttd1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1417,681,869 - 17,710,842 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Fyttd1
102 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:596
Count of miRNA genes:213
Interacting mature miRNAs:258
Transcripts:ENSRNOT00000042240, ENSRNOT00000050535
Prediction methods:Microtar, Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)112252474682951192Rat
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)117330848796070872Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)114644316891443168Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)115892833699753367Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)113294306789836615Rat
1549848Bvd6Brain ventricular dilatation QTL 63.10.0001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)117961851999753367Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)113642841681428416Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)117385089499753367Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)115893182292356038Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)115441539196071021Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)115775483796071021Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112019354996351019Rat
724561Plsm4Polydactyly-luxate syndrome (PLS) morphotypes QTL 40.0003forelimb integrity trait (VT:0010562)front foot phalanges count (CMO:0001947)116796218499753367Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)113674945981749459Rat
631506Bp104Blood pressure QTL 1042.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)117330831599753367Rat
4889521Gluco62Glucose level QTL 622.820.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)116859932196497754Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)113674945981749459Rat
7411658Foco27Food consumption QTL 2716.20.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)116985594399753367Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)115827236396350770Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)113674945981749459Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)115107102196071021Rat

Markers in Region
BE108645  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21167,883,724 - 67,883,874 (+)MAPPERmRatBN7.2
Rnor_6.01171,119,689 - 71,119,838NCBIRnor6.0
Rnor_5.01174,204,595 - 74,204,744UniSTSRnor5.0
RGSC_v3.41169,703,634 - 69,703,783UniSTSRGSC3.4
Celera1167,327,413 - 67,327,562UniSTS
RH 3.4 Map11391.9UniSTS
Cytogenetic Map11q22UniSTS
RH139328  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21167,880,113 - 67,880,238 (+)MAPPERmRatBN7.2
Rnor_6.01171,116,078 - 71,116,202NCBIRnor6.0
Rnor_5.01174,200,984 - 74,201,108UniSTSRnor5.0
RGSC_v3.41169,700,023 - 69,700,147UniSTSRGSC3.4
Celera1167,323,802 - 67,323,926UniSTS
Cytogenetic Map11q22UniSTS
RH139375  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21167,878,082 - 67,878,184 (+)MAPPERmRatBN7.2
Rnor_6.01171,114,047 - 71,114,148NCBIRnor6.0
Rnor_5.01174,198,953 - 74,199,054UniSTSRnor5.0
RGSC_v3.41169,697,992 - 69,698,093UniSTSRGSC3.4
Celera1167,321,771 - 67,321,872UniSTS
RH 3.4 Map11393.1UniSTS
Cytogenetic Map11q22UniSTS
RH141224  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21167,878,445 - 67,878,641 (+)MAPPERmRatBN7.2
Rnor_6.01171,114,410 - 71,114,605NCBIRnor6.0
Rnor_5.01174,199,316 - 74,199,511UniSTSRnor5.0
RGSC_v3.41169,698,355 - 69,698,550UniSTSRGSC3.4
Celera1167,322,134 - 67,322,329UniSTS
RH 3.4 Map11391.8UniSTS
Cytogenetic Map11q22UniSTS
AI045433  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21167,878,694 - 67,878,812 (+)MAPPERmRatBN7.2
Rnor_6.01171,114,659 - 71,114,776NCBIRnor6.0
Rnor_5.01174,199,565 - 74,199,682UniSTSRnor5.0
RGSC_v3.41169,698,604 - 69,698,721UniSTSRGSC3.4
Celera1167,322,383 - 67,322,500UniSTS
RH 3.4 Map11402.3UniSTS
Cytogenetic Map11q22UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000042240   ⟹   ENSRNOP00000045986
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1171,116,581 - 71,136,673 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000050535   ⟹   ENSRNOP00000044272
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1181,383,040 - 81,412,551 (-)Ensembl
mRatBN7.2 Ensembl1167,878,353 - 67,907,511 (-)Ensembl
Rnor_6.0 Ensembl1171,116,581 - 71,135,493 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000080568   ⟹   ENSRNOP00000073905
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1171,116,579 - 71,128,299 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000098473   ⟹   ENSRNOP00000086746
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1181,383,040 - 81,412,599 (-)Ensembl
mRatBN7.2 Ensembl1167,877,967 - 67,900,709 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000140987   ⟹   ENSRNOP00000104913
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1181,385,688 - 81,405,782 (-)Ensembl
RefSeq Acc Id: NM_001399283   ⟹   NP_001386212
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81181,383,040 - 81,412,551 (-)NCBI
mRatBN7.21167,877,967 - 67,907,479 (-)NCBI
RefSeq Acc Id: XM_039088498   ⟹   XP_038944426
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81181,383,040 - 81,412,604 (-)NCBI
mRatBN7.21167,877,967 - 67,907,500 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001386212 (Get FASTA)   NCBI Sequence Viewer  
  XP_038944426 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAP78754 (Get FASTA)   NCBI Sequence Viewer  
  EDM11388 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000044272
GenBank Protein Q7TQ84 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Acc Id: ENSRNOP00000073905   ⟸   ENSRNOT00000080568
Ensembl Acc Id: ENSRNOP00000045986   ⟸   ENSRNOT00000042240
Ensembl Acc Id: ENSRNOP00000044272   ⟸   ENSRNOT00000050535
RefSeq Acc Id: XP_038944426   ⟸   XM_039088498
- Peptide Label: isoform X1
- UniProtKB: F1M0P3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000086746   ⟸   ENSRNOT00000098473
RefSeq Acc Id: NP_001386212   ⟸   NM_001399283
- UniProtKB: Q7TQ84 (UniProtKB/Swiss-Prot),   F1M0P3 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000104913   ⟸   ENSRNOT00000140987

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TQ84-F1-model_v2 AlphaFold Q7TQ84 1-317 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306899 AgrOrtholog
BioCyc Gene G2FUF-21118 BioCyc
Ensembl Genes ENSRNOG00000034233 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000050535 ENTREZGENE
InterPro FYTTD1 UniProtKB/Swiss-Prot
NCBI Gene 360726 ENTREZGENE
PANTHER PTHR21038 UniProtKB/Swiss-Prot
  UAP56-INTERACTING FACTOR UniProtKB/Swiss-Prot
Pfam FYTT UniProtKB/Swiss-Prot
PhenoGen Fyttd1 PhenoGen
RatGTEx ENSRNOG00000034233 RatGTEx
UniProt A0A8I6A6L5_RAT UniProtKB/TrEMBL
  A0ABK0L5C8_RAT UniProtKB/TrEMBL
  F1M0P3 ENTREZGENE, UniProtKB/TrEMBL
  Q7TQ84 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-03-30 Fyttd1  forty-two-three domain containing 1  RGD1306899  similar to putative 40-2-3 protein  Symbol and Name updated 1299863 APPROVED
2005-12-06 RGD1306899  similar to putative 40-2-3 protein  RGD1306899_predicted  similar to putative 40-2-3 protein (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1306899_predicted  similar to putative 40-2-3 protein (predicted)  LOC360726_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC360726_predicted  similar to putative 40-2-3 protein (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL