Slc22a13 (solute carrier family 22 member 13)

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Gene: Slc22a13 (solute carrier family 22 member 13) Rattus norvegicus

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Symbol:

Slc22a13

Name:

solute carrier family 22 member 13

RGD ID:

1306840

Description:

Predicted to enable nicotinate transmembrane transporter activity and urate transmembrane transporter activity. Predicted to be involved in several processes, including nicotinate transport; positive regulation of T cell mediated cytotoxicity directed against tumor cell target; and urate transport. Predicted to be located in Golgi apparatus; apical plasma membrane; and endoplasmic reticulum. Orthologous to human SLC22A13 (solute carrier family 22 member 13); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; INTERACTS WITH bisphenol A; cyclosporin A; methamphetamine.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

LOC316062; OAT10; ORCTL-3; organic anion transporter 10; organic cation transporter-like 3; solute carrier family 22 (organic anion transporter), member 13; solute carrier family 22 (organic anion/urate transporter), member 13; solute carrier family 22 (organic cation transporter), member 13

RGD Orthologs

Human

Mouse

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC22A13 (solute carrier family 22 member 13)	RGD	RGD
Mus musculus (house mouse):	Slc22a13 (solute carrier family 22 (organic cation transporter), member 13)	RGD	RGD
Alliance orthologs ³
Homo sapiens (human):	SLC22A13 (solute carrier family 22 member 13)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc22a13 (solute carrier family 22 (organic cation transporter), member 13)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc22a13b	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG14855	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG14856	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG16727	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG17751	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG17752	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	GIT1	Alliance	DIOPT (Ensembl Compara\|Hieranoid)
Drosophila melanogaster (fruit fly):	CG6006	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG7342	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG6356	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG6231	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG7333	Alliance	DIOPT (Ensembl Compara\|OMA\|PANTHER)
Drosophila melanogaster (fruit fly):	CG8654	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)
Caenorhabditis elegans (roundworm):	str-176	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Caenorhabditis elegans (roundworm):	K05F1.6	Alliance	DIOPT (Ensembl Compara\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	slc22a13	Alliance	DIOPT (OMA\|OrthoFinder\|PhylomeDB)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	127,800,097 - 127,811,750 (-)	NCBI		GRCr8
mRatBN7.2	8	118,922,367 - 118,934,020 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	118,922,367 - 118,953,635 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	124,523,764 - 124,535,564 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	122,722,731 - 122,734,583 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	120,555,873 - 120,567,444 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	127,885,268 - 127,900,829 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	127,885,268 - 127,900,463 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	127,092,455 - 127,107,283 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	124,159,275 - 124,174,462 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	124,179,329 - 124,209,653 (-)	NCBI
Celera	8	118,095,450 - 118,105,170 (-)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brugada syndrome (ISO)

Immunodeficiency 68 (ISO)

Visceral Heterotaxy 4, Autosomal (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

aflatoxin B1 (ISO)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

CGP 52608 (ISO)

cyclosporin A (EXP)

disodium selenite (ISO)

methamphetamine (EXP)

methotrexate (ISO)

ochratoxin A (EXP)

paracetamol (ISO)

pirinixic acid (ISO)

pyrazinecarboxamide (EXP)

SCH 23390 (EXP)

sirolimus (EXP)

tacrolimus hydrate (EXP)

Theaflavin 3,3'-digallate (ISO)

titanium dioxide (ISO)

Triptolide (EXP)

triptonide (ISO)

vancomycin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

negative regulation of fatty acid metabolic process (ISO)

nicotinate transport (ISO)

positive regulation of T cell mediated cytotoxicity directed against tumor cell target (ISO)

transmembrane transport (IEA)

urate transport (ISO)

Cellular Component

apical plasma membrane (ISO)

endoplasmic reticulum (ISO)

Golgi apparatus (ISO)

membrane (IEA)

plasma membrane (ISO)

Molecular Function

nicotinate transmembrane transporter activity (ISO)

transmembrane transporter activity (IEA)

urate transmembrane transporter activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

nicotinamide adenine dinucleotide metabolic pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
2.	The human NAD metabolome: Functions, metabolism and compartmentalization.	Nikiforov A, etal., Crit Rev Biochem Mol Biol. 2015;50(4):284-97. doi: 10.3109/10409238.2015.1028612. Epub 2015 Apr 2.
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:10072596	PMID:12477932	PMID:18411268	PMID:19056867	PMID:19282870	PMID:23376485	PMID:24147638	PMID:24769897

Genomics

Comparative Map Data

Slc22a13
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	127,800,097 - 127,811,750 (-)	NCBI		GRCr8
mRatBN7.2	8	118,922,367 - 118,934,020 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	118,922,367 - 118,953,635 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	124,523,764 - 124,535,564 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	122,722,731 - 122,734,583 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	120,555,873 - 120,567,444 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	127,885,268 - 127,900,829 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	127,885,268 - 127,900,463 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	127,092,455 - 127,107,283 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	124,159,275 - 124,174,462 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	124,179,329 - 124,209,653 (-)	NCBI
Celera	8	118,095,450 - 118,105,170 (-)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

SLC22A13
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	38,265,812 - 38,278,757 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	38,265,812 - 38,278,757 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	38,307,303 - 38,320,248 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	38,282,335 - 38,294,810 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	38,282,334 - 38,294,810	NCBI
Celera	3	38,242,927 - 38,255,435 (+)	NCBI		Celera
Cytogenetic Map	3	p22.2	NCBI
HuRef	3	38,349,252 - 38,361,760 (+)	NCBI		HuRef
CHM1_1	3	38,258,992 - 38,271,500 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	38,271,525 - 38,284,466 (+)	NCBI		T2T-CHM13v2.0

Slc22a13
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	119,020,618 - 119,038,171 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	119,022,040 - 119,038,164 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	119,192,966 - 119,209,105 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	119,192,974 - 119,209,098 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	119,102,092 - 119,118,223 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	119,041,672 - 119,057,784 (-)	NCBI		MGSCv36	mm8
Celera	9	119,660,862 - 119,676,484 (-)	NCBI		Celera
Cytogenetic Map	9	F3	NCBI
cM Map	9	71.33	NCBI

Variants

Variants in Slc22a13
18 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	175
Count of miRNA genes:	115
Interacting mature miRNAs:	129
Transcripts:	ENSRNOT00000045105
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303171	Bp331	Blood pressure QTL 331	5.57	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	61290298	119084929	Rat
738011	Anxrr9	Anxiety related response QTL 9	6.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	8	93535351	123900184	Rat
724539	Cm19	Cardiac mass QTL 19	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	8	100149864	120994388	Rat
1358903	Bp252	Blood pressure QTL 252	7	0.0001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	93965141	123900184	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	46531639	119088626	Rat
738014	Anxrr15	Anxiety related response QTL 15	3.6	0.005	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	8	95718998	123900184	Rat
2300182	Bmd56	Bone mineral density QTL 56	5.4		femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	95718998	123900184	Rat
1554321	Bmd3	Bone mineral density QTL 3	7.9	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	40952565	123900184	Rat
2300181	Bmd55	Bone mineral density QTL 55	5.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	76468691	121468691	Rat
1358893	Bp263	Blood pressure QTL 263	5.01		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	8	93965141	123900184	Rat
61437	Cia6	Collagen induced arthritis QTL 6			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	82460758	122812818	Rat

Markers in Region

RH141526

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	118,922,448 - 118,922,642 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	127,885,350 - 127,885,543	NCBI	Rnor6.0
Rnor_5.0	8	127,092,632 - 127,092,825	UniSTS	Rnor5.0
RGSC_v3.4	8	124,159,357 - 124,159,550	UniSTS	RGSC3.4
Celera	8	118,095,532 - 118,095,725	UniSTS
RH 3.4 Map	8	1289.2	UniSTS
Cytogenetic Map	8	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	9	47	113	83	81	51	24	51	6	205	93	93	45	58	30

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001126285	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766677	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008766678	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC166511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000078303 ⟹ ENSRNOP00000075628

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	118,922,367 - 118,953,609 (-)	Ensembl
Rnor_6.0 Ensembl	8	127,885,268 - 127,900,463 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000094542 ⟹ ENSRNOP00000085528

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	118,942,695 - 118,953,635 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000099503 ⟹ ENSRNOP00000076627

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	118,922,367 - 118,933,994 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104015 ⟹ ENSRNOP00000088097

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	8	118,922,685 - 118,933,994 (-)	Ensembl

RefSeq Acc Id:

NM_001126285 ⟹ NP_001119757

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	127,800,097 - 127,811,750 (-)	NCBI
mRatBN7.2	8	118,922,367 - 118,934,020 (-)	NCBI
Rnor_6.0	8	127,885,268 - 127,900,463 (-)	NCBI
Rnor_5.0	8	127,092,455 - 127,107,283 (-)	NCBI
RGSC_v3.4	8	124,159,275 - 124,174,462 (-)	RGD
Celera	8	118,095,450 - 118,105,170 (-)	RGD

Sequence:

show sequence

CCTCCACTAAGCAGTGATAAGCAGACATGGCCCAGTTTGCACAGGTCATGGCTGAAGTGGGCGA
TTTTGGTCGCTTCCAGGTGCGGTTGACCATCCTGATGGGCATCCCCAATTTCCTGTCTGCATTC
TTCGTGTTTAGCCAGGTCTTCATGGTCCTTGATGAGGCTCACTACTGTTCAGTGTCCTGGGTTA
AGAACCACACTTTCAACCTAAGTGCTGCTGAGCAGCTGGCTGTCAGCATACCCAACGACACGGC
AGGCAGGCCCGAGTCCTGCCTCATGTTCCGGCCACCTCCTGACAATGCCAGCCTGGAAGACATC
CTGAGCCACCGCTTCAATGAGACACAGGCCTGCGACTCGGGCTGGGACTATCCTGAGAACAGGC
CTCCGTCCCTAAAGAACGAGTTTGACCTGGTGTGTGAGCGGGAGAACCTGAAGAGGACCTCGCA
GTCGGTGTTCATGGCGGGGCTCCTAGTGGGGGCCCTAGTCTTTGGGCCTGTCTGTGACTGGATT
GGCCGCAGACCCTCCCTCCTAATGCAGCTGCTTCTGTCAGGCATCGCAAGTATGGCTACAGCCT
TTGTGTCCAGCTTTGAGCTCTATATGACCCTACGCTTTGCCTTGGCTACTGCCAACGCTGGATT
TTTACTGAGCAGCAATGTCCTGCTTTCAGAGTGGGTGGGAACATCCCGGAGGACACGAGCCATG
GTCCTGGCCCAGAGCAACTTTGCCCTTGGGCTGATGGCGTTAGCAGGACTGGCCTATGGTGTCC
GAAACTGGAGACTCCTTCAGATAATAGGCACCACACCCATCTTCCTGCTTGTCTTCTATTTCTG
GGTTCTGCCAGAATCTCCACGGTGGCTCCTCTCTCAAGGAAGGACAGAGGAGGCCAAACAGCTG
GTCCAGAAGGCAGCCTTGGTGAACGGCCGGCCACTTGCCTCTGAGCTCCTGAACCAGCTGGTCC
CTGAGAAGACAGGCCCCTCGGGGAATGCCTTGGATCTTTTCAGACACCCTCAGCTCAGGAAGGT
GACTCTGATTCTCATAGCTGTCTGGTTTGTGGACAGCCTGCTGTACTATGGACTCGGCTTCCAA
GTGGGGGACTTTGGTCTGGACATCTACCTGACACAGGTAATATTCGGAGTAGTGGAAGTACCTG
CCCGTCTTTCCAGCATCCCCATGATGGAGAAGCTGGGTCGGAAGTGGAGCCAGCTCTGTACCCT
GACCCTTGCTGGTGTCATGTGTGTCATCATCATCTTCATCCCAGGAGATCTTCCCACAGTGGCC
ACTGCACTGGCTGTGGTGGGGAAGTTTGCCTCGTCTGCTGCCTTCACCATTTCCTATGTGTACA
CTGCTGAGCTCCTCCCCACCATCATCAGGCAAACAGGCATGGGGTTGGTGAGCATCTTCTCCAG
GGTCGGGGGCATCATCACACCCCTTGTGATGCTGCTGGAACAGTACCACAAGGCGATTCCCATG
CTGATCTTTGGCAGCCTCCCCATTGGGGCAGGCCTACTGTGTGCTCTGCTGCCTGAGACAAGAG
GCCAGACCCTGAAGGACACCCTCCAGGACCTGGAGCAGGGGCAGCCCCCACGGTCCTACAAAAC
TGCACCCCAAAGAAAAGACGTGGAGGCCTCAGGAAGAACGTCCAGTGCCAGGGTGGCCGTTGTG
AGAAGCTCCTACTTCTGACTGTGGTCGCTAAGGGCCAGCCTATCAAAGGCCCAGGACAGCCCAC
ACCATCTTCCTGTTTGAATGGCATCCGTAGCGCACAGGATCAGACCAGCCGTGTTCATGGCCCC
CGCTCCATACTGCAGAACCCTGTGGAAGTGCCAGGGTCCGTACCCCTCCCTCCTCCACACCCCT
GATACACACACTGCACCCCAGTACCACAGCTGAGTCAGGGCCTGGATGGTTCTTGGTCTTCTCT
GACATCTCTCTGGGATTACGGTCTCCCTGTTCGCCCTGTCTGGAATACTCCATCCCCATAAAGA
CAAGGATGAAACCACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001119757	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI66511	(Get FASTA)	NCBI Sequence Viewer
	B2GV36	(Get FASTA)	NCBI Sequence Viewer
	EDL76920	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000075628.1
	ENSRNOP00000076627.1
	ENSRNOP00000085528.1
	ENSRNOP00000088097.1
	ENSRNOP00065004667

RefSeq Acc Id:

NP_001119757 ⟸ NM_001126285

- UniProtKB:

B2GV36 (UniProtKB/TrEMBL), A0A8I6A5H4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAQFAQVMAEVGDFGRFQVRLTILMGIPNFLSAFFVFSQVFMVLDEAHYCSVSWVKNHTFNLSA
AEQLAVSIPNDTAGRPESCLMFRPPPDNASLEDILSHRFNETQACDSGWDYPENRPPSLKNEFD
LVCERENLKRTSQSVFMAGLLVGALVFGPVCDWIGRRPSLLMQLLLSGIASMATAFVSSFELYM
TLRFALATANAGFLLSSNVLLSEWVGTSRRTRAMVLAQSNFALGLMALAGLAYGVRNWRLLQII
GTTPIFLLVFYFWVLPESPRWLLSQGRTEEAKQLVQKAALVNGRPLASELLNQLVPEKTGPSGN
ALDLFRHPQLRKVTLILIAVWFVDSLLYYGLGFQVGDFGLDIYLTQVIFGVVEVPARLSSIPMM
EKLGRKWSQLCTLTLAGVMCVIIIFIPGDLPTVATALAVVGKFASSAAFTISYVYTAELLPTII
RQTGMGLVSIFSRVGGIITPLVMLLEQYHKAIPMLIFGSLPIGAGLLCALLPETRGQTLKDTLQ
DLEQGQPPRSYKTAPQRKDVEASGRTSSARVAVVRSSYF

hide sequence

Ensembl Acc Id:

ENSRNOP00000075628 ⟸ ENSRNOT00000078303

Ensembl Acc Id:

ENSRNOP00000076627 ⟸ ENSRNOT00000099503

Ensembl Acc Id:

ENSRNOP00000088097 ⟸ ENSRNOT00000104015

Ensembl Acc Id:

ENSRNOP00000085528 ⟸ ENSRNOT00000094542

Protein Domains

Major facilitator superfamily (MFS) profile

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B2GV36-F1-model_v2	AlphaFold	B2GV36	1-551	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306840	AgrOrtholog
BioCyc Gene	G2FUF-28798	BioCyc
Ensembl Genes	ENSRNOG00000056476	Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSRNOG00065004676	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000078303.2	UniProtKB/Swiss-Prot
	ENSRNOT00000094542.1	UniProtKB/TrEMBL
	ENSRNOT00000099503.1	UniProtKB/Swiss-Prot
	ENSRNOT00000104015.1	UniProtKB/TrEMBL
	ENSRNOT00065006783	UniProtKB/Swiss-Prot
Gene3D-CATH	1.20.1250.20	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7128568	IMAGE-MGC_LOAD
InterPro	Major_facilitator_SF	UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
	MFS_sugar_transport-like	UniProtKB/Swiss-Prot
	MFS_trans_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Sub_transporter	UniProtKB/TrEMBL
	Sugar_transporter_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:316062	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:188079	IMAGE-MGC_LOAD
NCBI Gene	316062	ENTREZGENE
PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SOLUTE CARRIER FAMILY 22 MEMBER 13	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Sugar_tr	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Slc22a13	PhenoGen
PROSITE	MFS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SUGAR_TRANSPORT_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000056476	RatGTEx
	ENSRNOG00065004676	RatGTEx
Superfamily-SCOP	MFS_gen_substrate_transporter	UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt	A0A8I6A3J4_RAT	UniProtKB/TrEMBL
	A0A8I6A5H4	ENTREZGENE, UniProtKB/TrEMBL
	B2GV36	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-25	Slc22a13	solute carrier family 22 member 13	Slc22a13	solute carrier family 22 (organic anion/urate transporter), member 13	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2013-08-02	Slc22a13	solute carrier family 22 (organic anion/urate transporter), member 13	Slc22a13	solute carrier family 22 (organic anion transporter), member 13	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-19	Slc22a13	solute carrier family 22 (organic anion transporter), member 13	Slc22a13	solute carrier family 22 (organic cation transporter), member 13	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Slc22a13	solute carrier family 22 (organic cation transporter), member 13	Slc22a13_predicted	solute carrier family 22 (organic cation transporter), member 13 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Slc22a13_predicted	solute carrier family 22 (organic cation transporter), member 13 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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