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Gene: B3galt5 (Beta-1,3-galactosyltransferase 5) Rattus norvegicus

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Symbol:

B3galt5

Name:

Beta-1,3-galactosyltransferase 5

RGD ID:

1306727

Description:

Predicted to enable N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity. Predicted to be involved in protein O-linked glycosylation. Predicted to act upstream of or within response to bacterium. Predicted to be located in Golgi apparatus and membrane. Predicted to be active in Golgi membrane. Orthologous to human B3GALT5 (beta-1,3-galactosyltransferase 5); PARTICIPATES IN globoside metabolic pathway; lacto-series glycosphingolipid metabolic pathway; INTERACTS WITH 1,3-dinitrobenzene; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC288161; UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	B3GALT5 (beta-1,3-galactosyltransferase 5)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	B3galt5 (UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	B3galt5 (beta-1,3-galactosyltransferase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	B3GALT5 (beta-1,3-galactosyltransferase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	B3GALT5 (beta-1,3-galactosyltransferase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	B3galt5 (beta-1,3-galactosyltransferase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	B3GALT5 (beta-1,3-galactosyltransferase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	B3GALT5 (beta-1,3-galactosyltransferase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	B3galt5 (beta-1,3-galactosyltransferase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	B3galt5 (beta-1,3-galactosyltransferase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	GPN3 (GPN-loop GTPase 3)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	B3GALT5 (beta-1,3-galactosyltransferase 5)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	B3galt5 (UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	aars2 (alanyl-tRNA synthetase 2, mitochondrial (putative))	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Danio rerio (zebrafish):	zgc:194330	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Danio rerio (zebrafish):	zgc:162952	Alliance	DIOPT (Ensembl Compara\|OMA)
Drosophila melanogaster (fruit fly):	brn	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	brn	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoInspector\|SonicParanoid)
Caenorhabditis elegans (roundworm):	bre-5	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	bre-5	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OrthoInspector\|SonicParanoid)
Danio rerio (zebrafish):	b3galt8	Alliance	DIOPT (Ensembl Compara\|OMA)
Danio rerio (zebrafish):	b3galt8	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	b3galt5.4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	b3galt5.4	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	b3galt5l	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	b3galt5l	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	b3galt5.2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	b3galt5.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	b3galt5.3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	b3galt5.5	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	b3galt5.6	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	49,053,959 - 49,100,398 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	11	49,006,560 - 49,101,283 (+)	Ensembl				GRCr8
mRatBN7.2	11	35,584,273 - 35,630,922 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	35,585,220 - 35,630,917 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	11	44,281,873 - 44,287,919 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	36,953,251 - 36,959,297 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	36,099,044 - 36,105,247 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	36,638,067 - 36,683,915 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	36,634,662 - 36,683,672 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	11	40,163,670 - 40,211,815 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	11	36,580,436 - 36,641,598 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	11	32,839,913 - 32,846,116 (-)	NCBI		Celera
RGSC_v3.1	11	36,673,191 - 36,695,438 (+)	NCBI
Cytogenetic Map	11	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

pancreatic cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

1,3-dinitrobenzene (EXP)

17beta-estradiol (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,3',5,5'-tetrabromobisphenol A (ISO)

4,4'-sulfonyldiphenol (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

alpha-Zearalanol (EXP)

amphetamine (EXP)

ampicillin (EXP)

apigenin (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

Benzo[ghi]perylene (ISO)

bisphenol A (EXP,ISO)

Butylbenzyl phthalate (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

copper(II) sulfate (ISO)

Cuprizon (EXP)

diarsenic trioxide (ISO)

dibutyl phthalate (EXP,ISO)

dimethylarsinic acid (ISO)

endosulfan (EXP)

ethanol (ISO)

furan (EXP)

gentamycin (EXP)

glyphosate (ISO)

indole-3-methanol (EXP)

kaempferol (ISO)

methapyrilene (ISO)

methylarsonic acid (ISO)

metronidazole (EXP)

N-acetyl-L-cysteine (EXP)

N-nitrosodiethylamine (EXP)

neomycin (EXP)

ozone (ISO)

paracetamol (EXP)

pirinixic acid (EXP)

sodium arsenate (ISO)

sodium arsenite (ISO)

sodium dichromate (EXP)

tamoxifen (ISO)

testosterone (EXP)

triptonide (ISO)

valproic acid (ISO)

vancomycin (EXP)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

glycoprotein biosynthetic process (IEA)

lipid metabolic process (IEA)

response to bacterium (ISO)

Cellular Component

Golgi membrane (IBA,IEA)

membrane (IEA)

Molecular Function

glycosyltransferase activity (IEA)

hexosyltransferase activity (IEA)

N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (IBA)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

globoside metabolic pathway (IEA)

lacto-series glycosphingolipid metabolic pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Association between expression levels of CA 19-9 and N-acetylglucosamine-beta;1,3-galactosyltransferase 5 gene in human pancreatic cancer tissue.	Hayashi N, etal., Pathobiology. 2004;71(1):26-34.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
6.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
8.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:16780588	PMID:23012479

Genomics

Comparative Map Data

B3galt5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	49,053,959 - 49,100,398 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	11	49,006,560 - 49,101,283 (+)	Ensembl				GRCr8
mRatBN7.2	11	35,584,273 - 35,630,922 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	35,585,220 - 35,630,917 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	11	44,281,873 - 44,287,919 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	36,953,251 - 36,959,297 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	36,099,044 - 36,105,247 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	36,638,067 - 36,683,915 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	36,634,662 - 36,683,672 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	11	40,163,670 - 40,211,815 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	11	36,580,436 - 36,641,598 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	11	32,839,913 - 32,846,116 (-)	NCBI		Celera
RGSC_v3.1	11	36,673,191 - 36,695,438 (+)	NCBI
Cytogenetic Map	11	q11	NCBI

B3GALT5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	39,612,940 - 39,673,137 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	21	39,556,442 - 39,673,137 (+)	Ensembl			hg38	GRCh38
GRCh37	21	40,984,867 - 41,045,064 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	39,951,124 - 39,956,685 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	21	39,951,123 - 39,956,685	NCBI
Celera	21	26,226,688 - 26,232,244 (+)	NCBI		Celera
Cytogenetic Map	21	q22.2	NCBI
HuRef	21	26,454,204 - 26,504,098 (+)	NCBI		HuRef
CHM1_1	21	40,545,618 - 40,595,561 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	21	37,997,410 - 38,057,589 (+)	NCBI		T2T-CHM13v2.0

B3galt5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	96,037,001 - 96,121,059 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	96,037,001 - 96,121,059 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	16	96,235,801 - 96,319,859 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	96,235,801 - 96,319,859 (+)	Ensembl			mm10	GRCm38
MGSCv37	16	96,457,408 - 96,541,465 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	16	96,385,942 - 96,424,767 (+)	NCBI		MGSCv36	mm8
Celera	16	97,308,806 - 97,394,295 (+)	NCBI		Celera
Cytogenetic Map	16	C4	NCBI
cM Map	16	56.88	NCBI

B3galt5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955407	38,343,581 - 38,393,408 (+)	Ensembl
ChiLan1.0	NW_004955407	38,343,581 - 38,393,408 (+)	NCBI	ChiLan1.0	ChiLan1.0

B3GALT5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	22	35,710,822 - 35,771,737 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	21	30,566,931 - 30,627,785 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	21	25,909,993 - 26,027,130 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	21	39,304,059 - 39,351,698 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	21	39,346,707 - 39,350,305 (+)	Ensembl			panPan2	panpan1.1

B3GALT5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	31	34,338,025 - 34,376,080 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	31	34,369,298 - 34,373,204 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	31	33,614,794 - 33,653,109 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	31	33,849,103 - 33,887,450 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	31	33,849,050 - 33,887,438 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	31	33,720,578 - 33,758,851 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	31	33,725,701 - 33,764,175 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	31	34,217,340 - 34,255,787 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

B3galt5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	33,767,465 - 33,857,029 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936500	3,619,216 - 3,620,142 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936500	3,613,910 - 3,621,119 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

B3GALT5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	13	203,208,353 - 203,250,085 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	213,579,705 - 213,584,066 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

B3GALT5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	83,561,817 - 83,606,342 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	83,603,946 - 83,604,881 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666054	11,363,234 - 11,466,464 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

B3galt5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624745	24,390,015 - 24,450,705 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

B3galt5
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	48,355,409 - 48,393,386 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in B3galt5
388 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	984
Count of miRNA genes:	330
Interacting mature miRNAs:	456
Transcripts:	ENSRNOT00000050178
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	22524746	82951192	Rat
724554	Iddm17	Insulin dependent diabetes mellitus QTL 17		0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	46443168	91443168	Rat
1598841	Memor7	Memory QTL 7			exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	11	33306008	78306008	Rat
1598811	Bp291	Blood pressure QTL 291	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	33306008	78306008	Rat
634339	Niddm50	Non-insulin dependent diabetes mellitus QTL 50	3.32		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	11	10806125	55806125	Rat
634341	Bw121	Body weight QTL 121	3.56		abdominal fat pad mass (VT:1000711)	abdominal fat pad weight (CMO:0000088)	11	35323199	55805892	Rat
8694376	Bw156	Body weight QTL 156	2.25	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	36749459	81749459	Rat
10755497	Bp388	Blood pressure QTL 388	2.76		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	32943067	89836615	Rat
724517	Uae18	Urinary albumin excretion QTL 18	3.7		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	29958996	57754989	Rat
1300130	Rf20	Renal function QTL 20	4.44		kidney glomerulus integrity trait (VT:0010546)	kidney glomerulus diameter (CMO:0001166)	11	31915469	76915469	Rat
2290451	Scl58	Serum cholesterol level QTL 58	3.48		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	11	26318031	55806125	Rat
10058952	Gmadr6	Adrenal mass QTL 6	2.29	0.0072	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	36428416	81428416	Rat
1600394	Edcs1	Endometrial carcinoma susceptibility QTL1	2.9	0.04	uterus morphology trait (VT:0001120)	percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)	11	12823152	57823152	Rat
1558659	Tescar1	Testicular tumor resistance QTL 1	3.9		testis integrity trait (VT:0010572)	percentage of study population developing testis tumors during a period of time (CMO:0001261)	11	34618760	79618760	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	20193549	96351019	Rat
9589032	Epfw10	Epididymal fat weight QTL 10	9.29	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	11	36749459	81749459	Rat
9590313	Scort20	Serum corticosterone level QTL 20	6.51	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	11	36749459	81749459	Rat
8694424	Bw162	Body weight QTL 162	3.8	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	36749459	81749459	Rat
631510	Spl2	Serum phospholipid level QTL 2	4.1		blood phospholipid amount (VT:0006084)	serum phospholipid level (CMO:0001171)	11	27556685	72556685	Rat

Markers in Region

B3galt5

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	35,626,226 - 35,626,470 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	36,679,221 - 36,679,464	NCBI	Rnor6.0
Rnor_5.0	11	40,207,121 - 40,207,364	UniSTS	Rnor5.0
RGSC_v3.4	11	36,637,146 - 36,637,389	UniSTS	RGSC3.4
Cytogenetic Map	11	q11	UniSTS

UniSTS:259585

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	35,626,522 - 35,626,908 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	36,679,517 - 36,679,902	NCBI	Rnor6.0
Rnor_5.0	11	40,207,417 - 40,207,802	UniSTS	Rnor5.0
RGSC_v3.4	11	36,637,442 - 36,637,827	UniSTS	RGSC3.4
Celera	11	32,843,927 - 32,844,312	UniSTS
Cytogenetic Map	11	q11	UniSTS

UniSTS:496019

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	35,626,117 - 35,626,209 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	36,679,112 - 36,679,203	NCBI	Rnor6.0
Rnor_5.0	11	40,207,012 - 40,207,103	UniSTS	Rnor5.0
RGSC_v3.4	11	36,637,037 - 36,637,128	UniSTS	RGSC3.4
Celera	11	32,844,626 - 32,844,717	UniSTS
Cytogenetic Map	11	q11	UniSTS

B3galt5

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	35,626,226 - 35,626,742 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	36,679,221 - 36,679,736	NCBI	Rnor6.0
Rnor_5.0	11	40,207,121 - 40,207,636	UniSTS	Rnor5.0
Celera	11	32,844,093 - 32,844,608	UniSTS
Cytogenetic Map	11	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	6	44	144	64	68	38	85	38	6	287	149	5	133	81	87	30	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001105887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001840411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001840413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000050178 ⟹ ENSRNOP00000045319

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	49,050,844 - 49,100,952 (+)	Ensembl
mRatBN7.2 Ensembl	11	35,585,220 - 35,629,422 (+)	Ensembl
Rnor_6.0 Ensembl	11	36,634,662 - 36,683,672 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000105039 ⟹ ENSRNOP00000088559

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	49,058,900 - 49,101,283 (+)	Ensembl
mRatBN7.2 Ensembl	11	35,589,451 - 35,630,917 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000116843 ⟹ ENSRNOP00000089523

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	49,006,560 - 49,101,283 (+)	Ensembl
mRatBN7.2 Ensembl	11	35,589,613 - 35,630,917 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000119017 ⟹ ENSRNOP00000082456

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	49,054,712 - 49,100,680 (+)	Ensembl
mRatBN7.2 Ensembl	11	35,589,451 - 35,630,917 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000124557 ⟹ ENSRNOP00000111107

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	49,058,659 - 49,101,283 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000134692 ⟹ ENSRNOP00000105311

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	49,058,578 - 49,101,283 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000153397 ⟹ ENSRNOP00000112618

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	49,058,762 - 49,101,283 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000158124 ⟹ ENSRNOP00000109496

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	49,058,669 - 49,101,283 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000163103 ⟹ ENSRNOP00000106597

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	49,058,659 - 49,101,283 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000163673 ⟹ ENSRNOP00000112674

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	11	49,058,907 - 49,101,283 (+)	Ensembl

RefSeq Acc Id:

NM_001105887 ⟹ NP_001099357

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	49,094,195 - 49,100,398 (+)	NCBI
mRatBN7.2	11	35,624,719 - 35,630,922 (+)	NCBI
Rnor_6.0	11	36,677,713 - 36,683,915 (+)	NCBI
Rnor_5.0	11	40,163,670 - 40,211,815 (+)	NCBI
RGSC_v3.4	11	36,580,436 - 36,641,598 (+)	RGD
Celera	11	32,839,913 - 32,846,116 (-)	NCBI

Sequence:

show sequence

TTATTCCCAAGAGACACAACCATCATTTTTGGTAGACAAACTGAGTCCAAAAGGTTGTCTGAGA
AGGTAGGGTGGAACCTCGCTCACCCTCCCCGGCTGCTCTTCAAAAGGAATTCATTTCCTCTTGG
CTTCTACCCTGTGGCTTAGCCCTCTGGACAGACCTGAGCTCTTACCTGGCAAAGATGGCCCACA
TGAAGACGAGGCTCCTTTATGCTTCCGTTCTCACGATGGGTGCGCTCTGCTTGTACTTCAGCAT
GGAGTCTTTCCAAGAACTCCCCTTTGTCTTCAAGAAAAGTCACGGGAAGTTCCTTCAGCTTCCG
GAGATAGACTGCAAGCAGAAGCCGCCTTTCCTGGTGCTGCTGGTGACGTCATCCCACAAGCAGC
TGGCGGCTCGCATGGCCATCCGCAAGACGTGGGGTAGAGAGACATCGGTGCAGGGCCAACCCGT
GAGGACCTTCTTCCTTCTGGGGTCCTCAGACAGCACGGAGGACATGGACGCTACAGCCCTGGAG
AGCGAGCAGCACCGTGACATCATCCAGAAGGATTTCAAGGACGCCTATTTCAACTTGACCCTGA
AGACCATGATGGGTATGGAATGGGTCTACCACTTTTGCCCTCAGACCGCTTATGTGATGAAAAC
GGACTCAGACATGTTTGTGAATGTTGGCTATCTGACCGAACTGCTGCTAAAGAAAAACAAAACA
ACCAGGTTCTTCACAGGCTACATAAAGCCCCACGACTTTCCCATCAGGCAGAAGTTCAACAAGT
GGTTTGTCAGTAAGTTCGAGTACCCCTGGGACAGGTACCCACCGTTTTGCTCTGGTACTGGTTA
TGTCTTTTCCAGCGACGTGGCGATCCAAGTATACAATGTCTCAGAGAGCGTTCCATTCATCAAG
CTGGAGGATGTGTTTGTTGGGCTCTGCCTGGCCAAGCTGAAGATCCGACCTGAGGAGCTCCACA
CCAAGCAGACCTTCTTCCCCGGTGGTTTACGCTTCTCTGTGTGCCGCTTTCAGAAAATTGTGGC
GTGCCATTTTATGAAGCCCCAGGACCTGCTCACTTACTGGCAGGCACTGGAGACCTCGAAAGAC
GAGGACTGTCCTGCGGTCTGAGGGGAGCCTGGTGGCACCTAGGACAAACTTCTGATAACCTTTG
GTGATGGTTTTGGGAAGACCTGGGATACTGGGTCTTGCTGGGAACTGTCTCGGGTAGAGAGAGG
ATGAGGAGTCCTCAGTGCCACAGGAGAAAGGATAAACACAAAAGCTGAGGAACGACGTGGCACC
CAGAGCAATAACAGATCTTGTTTTGTTCAGGCCTTTGCAGTATGCCCTCGATGCTTGAGACATG
CCCTTAATCCACCCGTATCAGGGCTCGGCATACACAGGAAGAAGCCCTGGATATGATCATCCCC
ATTTTGTAGTTTAAAAACCAGCAGCCAGAGTCACTTACTCGTTCAAAACTCACAGCCTGCAGAC
AGAGCAGGAATGAGAATCAAGTGGTATCGGGATTCAGTTGGTGGTCGGTCCTCAACTGTGTGTC
CCATGCCTTGGGAGAAGGTGGTGGTGGGGGAAGCTAAGTAGCATCCTTCAGTCTCCTGCCCCTC
GCTTCCCAATCCCTTCTACTTTTTGAATGTTAAGACTGGGATGAACCAGCTTTCTCAGGCCTTG
CCCATCGCTCGAATGATGTAGCTGGGTTCTGAGTTAACACAGATTAACCACTTGGTACCCAAAG
TGTCCTCAGTAGGATTTTAGGAGACACACATGCCTGCAGCCTCTGTGGCTCACATCCATGTTAG
AAGGAAACTGGTTCATACGACCATAAAAGTCAGGCTGAGAAGCCACTGCTGAGTCTTGCGATAG
AGACTGACCACACTGCTGACATCCCACGATGTCTCCACTGAGCCGACTCTGCTATGCATGTACT
ATAAGTGACCATTTGTAGCCCTGGGGTACTTCAGACCTCTAAGTTCAAACTCAAGGGCAGCCAG
GTATAGGGATAGTCTGAATGAGTATCTGGGAGCTTTCCTGGGCTCTGGGCTGTGTCTAAGCTCC
AGAGATACAGAGCATGGGAGTAGCCCCAGTCTAGGGTCTTTCCTAACTTTGGCTCTTTGCCCTG
AATTTATCATGTAGTTAGTCATAGACATACTGAGTGTTGCCATTTGGAATTTATTCCTGTTTGG
TGTCCCGACCCCTGAAGGTTTTCAGAGCTGGGTAAAAACAGGGCTTTTGACCATTCAGCCACAG
TCACCAGACATGTAATCTTGCTCTGTATTGCAGGAATTATTGCTTTCCCACAGCTTTTTACTTT
TCTAGATTTTACTATGAGCTTGGAGCAAAGGCTTCATGTGGCTATGTTGTTGTCAATGTTGGAA
TATGCTCTCACCTGAACTCAGGAAAACTTGACAGTTGCAGCAAACACTGTTAGGGTGGAGGAAG
CTGGAAGCTGCCTAGAGGGCCTCATTTCCATACTTGTTCCTGTCTCTCCTACGAATCTCTTCCA
CAACTTCTAGAGGAAATTCTTCTGTCTGTGGCATTCTTCAAAATCATGCAGCATCATGTTCTGG
ACCCTTATTGAGAATATATGAAATTCTGAACCATGTAAAGAGAAAGGGTATTTGCTCCTGGGTG
TGTACTGTGGATTACATACACCGTCAAAACCAAACCCAGCCACATCTTCTTTGACAGAGGGGGA
AGCCAAAGTTTGTAATGTGGTGGTGTTGCTGTCTAAAGGGTGGGAGAGCTGGCACCAGCCTCCA
TGCACCGTCCTTTTACTCATTCATTAGCCATATTTCTCTTTGTACCCACACATCATGAATGAGG
TTAAGGCTGGGTCTCCAGACAACAGACCCGAGTGAGCGGGAGTTCGAGCATCCAGTGCTGAGAA
GATGGTTGGGTATAGGTTTTTTTAGTATATGCACAGCGCCCTGGAGCCTAAGCAGGTGTGGTCA
CCTGTGTCCGCACTTGCTGTTTTGTTGAAGACAACAGCATCCTTCACAAGTGGCCATTCTTCAT
TCTTACAACCAGATTGGTTTTCAGCAGAGGCAGCTGAGGTGACCTCATGACTCACCCAGTGGCT
GAGACATGGCCCAGACACAGTACTTGGCCTTCCCCCTTGGTGCACCATCAACATCCTTTCCCAT
GTGCTTGCTTCTCTCAGAAGCTTGGGGCTGGTGCTACCCCAGGAGTTACCAGTATCTTACTTTG
CCTGCATGCTGCCACCTCTGTCCTGGGTGTTGTCTTCAGTGTTGGTCTACATGGTTTCCTGTGA
CTTGGCCTTGGGGGGTATCCATGCAGTTCTCACAACCCCCCCCATTTAGACTAGCCTTATCACG
AGGTCATGCGCGGCTAAGTCTGGTATATTGAGTTCAGTCCTTGAGGTTTATATGGTAGAGGAGA
GAATTGATCTTTACAAGCCCACGGTGGCACATATATGCCTGCACACGCGCATGCAAAAACATAA
GTAAAATGTAAACAAAAATATTTGCCAAGGCTCCTTCAGACACTGACCTCTGAGGCTCTTTGCT
TATTTTTATTTCTGCATTGCTTTCCATGATGCAAATCCTTGTGAGGGAACACTGGCACAGGTGT
GTGAACACTAGGGCAGGTGTGTGAACACTAGGACAGGTGTGTGAACACTAGGACAGGTGTGTGA
ACACTAGGACAGGTGTGTGAACACTGGCACAGGTGTGTGAACACTAGGACAGGTGTGTGAACAC
TAGGACAGGTGTGTGAACACTGGCACAGGTGTGTGAACACTAGGGCAGGTGTGTGAACACTAGG
ACAGGTGTGTGAACACTAGGACAGGTGTGTGAACACTGGCACAGGTGTGTGAACACTAGGACAG
GTGTGTGAACACTGGCACAGGTATAGTAGGAAAAAAACCCTCTCAGGATTATTTGCAAAATGCT
TTCATTTGGTTGGGAATTCAATAGAAATTCGTTGGGCTTGCCCCAGGTCTGTCTAGTTTCCCAC
CTGTTAACCTAACTCCCAGGATACCATCCTCAGAGATGGCCTTAGATTGTTCCTGGAGGTGAGG
GGTGAAACCACCCAAGAAGGGCTGTGTGAGCCTGACACGAGCAAGTTACAGTGAAGCATATTAA
CACAAGGTTTTAAGTCCACTAAAAATAGTATTTTCTAATTACCAGGTGTAACACTTTTAAATAG
AAATAGAAAATGGATTTTTGTGGCCAAATGTCATATACCTGCTTTTTCTGTGGTATTGTTTTGT
GGTTTTTGGTGCTGGGGATGGAGCCCTAATGCTTATCAGGGCCCCCCCTACTGTGCTTCTCCAG
CCCTGGTTGAGTTGTTTTGCATTTTACTACCTCCTGCAGGGGTCTAGGAGATCAGAGGCTGGTA
CATGCTGTTCAGATGCTATGCTATGGGTAGTTTTAACTGTTAACTCTGGAAGAGAATTTTAATG
AGAAATTATTTCTTCATTATTAGTTGATGTAGGAAGACTCAGTCCACTGTGGGCGACACTATTC
CCTAGGCAGGGTATACTAAATAGTATGAGAGGAGAAAGCCAGCCGAGGGCCAGCAAGGATCCGT
GTTTACCTCTCTGTCTGTCAGGCCTGTGGTGTGCCCATCTACTTCATGTTCCTGCCTTGACCTC
CCTGCAATAGCACACCACAACCTGGACTTGTGAGCCAAATAAACCCTCTCTCCCCCAAGTTGAC
TTTGTCATGGTAACAGAAATGAAGCTAAACCAGATGCTCAGGGTGATGCGCACACTGGATTGGA
CCCTTCTCACATTACCCTGCCCTGGATGTCATCCAGTACCACCCCTCTGTCCCACACAGAGGGG
AGCCCAGAAGCTGCTTCAGGGAACTATCAGAGGAGGAGAGCTGATTCATTTCACATTAAAAAAA
ATGCCTTCCATGACTGCAAACGACTCATCCGAAGCTGTGGACACTTTGTGGTCAAATTTGATTT
CCTAAAGGATAAAAAATTCAATGTCTATGTCACTGGAGTTTGGAATTGTCACTTGCCTGTATGT
GGAGGAGGTTCTACAGGCGCTGATACTGTGTTTTGGGAGCGGGTGTACGCGTTTGTGATTTGTT
AATGATATTTATCTTTAATAAAAATTAAGTTACAAGCAGCATAA

hide sequence

RefSeq Acc Id:

XM_017597928 ⟹ XP_017453417

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	49,058,821 - 49,100,395 (+)	NCBI
mRatBN7.2	11	35,589,370 - 35,630,922 (+)	NCBI
Rnor_6.0	11	36,642,469 - 36,683,915 (+)	NCBI

Sequence:

show sequence

CAGAGCTGTGGTCCAGGGGCCCAGACTCTGACTGACCGGCTGCTGCTGCGCTGCGGGAGTCAAG
TGCACCTCCTCCTGCCGCCGCGCACCTATCAGAGTCCCTAAGCGCATTGCCGCGCGCTCCTCCC
ACTTGCAAATACCAGTCCAGCTTGCGGCTGCCCTGGCCTGGACAGAGCCTGCGGGCCGCCTGCG
TCCCCTGTCCTGTCCCTTCTAAGCTCCAGCCGGACGACGTTATTCCCAAGAGACACAACCATCA
TTTTTGGTAGACAAACTGAGTCCAAAAGGTTGTCTGAGAAGGTAGGGTGGAACCTCGCTCACCC
TCCCCGGCTGCTCTTCAAAAGGAATTCATTTCCTCTTGGCTTCTACCCTGTGGCTTAGCCCTCT
GGACAGACCTGAGCTCTTACCTGGCAAAGATGGCCCACATGAAGACGAGGCTCCTTTATGCTTC
CGTTCTCACGATGGGTGCGCTCTGCTTGTACTTCAGCATGGAGTCTTTCCAAGAACTCCCCTTT
GTCTTCAAGAAAAGTCACGGGAAGTTCCTTCAGCTTCCGGAGATAGACTGCAAGCAGAAGCCGC
CTTTCCTGGTGCTGCTGGTGACGTCATCCCACAAGCAGCTGGCGGCTCGCATGGCCATCCGCAA
GACGTGGGGTAGAGAGACATCGGTGCAGGGCCAACCCGTGAGGACCTTCTTCCTTCTGGGGTCC
TCAGACAGCACGGAGGACATGGACGCTACAGCCCTGGAGAGCGAGCAGCACCGTGACATCATCC
AGAAGGATTTCAAGGACGCCTATTTCAACTTGACCCTGAAGACCATGATGGGTATGGAATGGGT
CTACCACTTTTGCCCTCAGACCGCTTATGTGATGAAAACGGACTCAGACATGTTTGTGAATGTT
GGCTATCTGACCGAACTGCTGCTAAAGAAAAACAAAACAACCAGGTTCTTCACAGGCTACATAA
AGCCCCACGACTTTCCCATCAGGCAGAAGTTCAACAAGTGGTTTGTCAGTAAGTTCGAGTACCC
CTGGGACAGGTACCCACCGTTTTGCTCTGGTACTGGTTATGTCTTTTCCAGCGACGTGGCGATC
CAAGTATACAATGTCTCAGAGAGCGTTCCATTCATCAAGCTGGAGGATGTGTTTGTTGGGCTCT
GCCTGGCCAAGCTGAAGATCCGACCTGAGGAGCTCCACACCAAGCAGACCTTCTTCCCCGGTGG
TTTACGCTTCTCTGTGTGCCGCTTTCAGAAAATTGTGGCGTGCCATTTTATGAAGCCCCAGGAC
CTGCTCACTTACTGGCAGGCACTGGAGACCTCGAAAGACGAGGACTGTCCTGCGGTCTGAGGGG
AGCCTGGTGGCACCTAGGACAAACTTCTGATAACCTTTGGTGATGGTTTTGGGAAGACCTGGGA
TACTGGGTCTTGCTGGGAACTGTCTCGGGTAGAGAGAGGATGAGGAGTCCTCAGTGCCACAGGA
GAAAGGATAAACACAAAAGCTGAGGAACGACGTGGCACCCAGAGCAATAACAGATCTTGTTTTG
TTCAGGCCTTTGCAGTATGCCCTCGATGCTTGAGACATGCCCTTAATCCACCCGTATCAGGGCT
CGGCATACACAGGAAGAAGCCCTGGATATGATCATCCCCATTTTGTAGTTTAAAAACCAGCAGC
CAGAGTCACTTACTCGTTCAAAACTCACAGCCTGCAGACAGAGCAGGAATGAGAATCAAGTGGT
ATCGGGATTCAGTTGGTGGTCGGTCCTCAACTGTGTGTCCCATGCCTTGGGAGAAGGTGGTGGT
GGGGGAAGCTAAGTAGCATCCTTCAGTCTCCTGCCCCTCGCTTCCCAATCCCTTCTACTTTTTG
AATGTTAAGACTGGGATGAACCAGCTTTCTCAGGCCTTGCCCATCGCTCGAATGATGTAGCTGG
GTTCTGAGTTAACACAGATTAACCACTTGGTACCCAAAGTGTCCTCAGTAGGATTTTAGGAGAC
ACACATGCCTGCAGCCTCTGTGGCTCACATCCATGTTAGAAGGAAACTGGTTCATACGACCATA
AAAGTCAGGCTGAGAAGCCACTGCTGAGTCTTGCGATAGAGACTGACCACACTGCTGACATCCC
ACGATGTCTCCACTGAGCCGACTCTGCTATGCATGTACTATAAGTGACCATTTGTAGCCCTGGG
GTACTTCAGACCTCTAAGTTCAAACTCAAGGGCAGCCAGGTATAGGGATAGTCTGAATGAGTAT
CTGGGAGCTTTCCTGGGCTCTGGGCTGTGTCTAAGCTCCAGAGATACAGAGCATGGGAGTAGCC
CCAGTCTAGGGTCTTTCCTAACTTTGGCTCTTTGCCCTGAATTTATCATGTAGTTAGTCATAGA
CATACTGAGTGTTGCCATTTGGAATTTATTCCTGTTTGGTGTCCCGACCCCTGAAGGTTTTCAG
AGCTGGGTAAAAACAGGGCTTTTGACCATTCAGCCACAGTCACCAGACATGTAATCTTGCTCTG
TATTGCAGGAATTATTGCTTTCCCACAGCTTTTTACTTTTCTAGATTTTACTATGAGCTTGGAG
CAAAGGCTTCATGTGGCTATGTTGTTGTCAATGTTGGAATATGCTCTCACCTGAACTCAGGAAA
ACTTGACAGTTGCAGCAAACACTGTTAGGGTGGAGGAAGCTGGAAGCTGCCTAGAGGGCCTCAT
TTCCATACTTGTTCCTGTCTCTCCTACGAATCTCTTCCACAACTTCTAGAGGAAATTCTTCTGT
CTGTGGCATTCTTCAAAATCATGCAGCATCATGTTCTGGACCCTTATTGAGAATATATGAAATT
CTGAACCATGTAAAGAGAAAGGGTATTTGCTCCTGGGTGTGTACTGTGGATTACATACACCGTC
AAAACCAAACCCAGCCACATCTTCTTTGACAGAGGGGGAAGCCAAAGTTTGTAATGTGGTGGTG
TTGCTGTCTAAAGGGTGGGAGAGCTGGCACCAGCCTCCATGCACCGTCCTTTTACTCATTCATT
AGCCATATTTCTCTTTGTACCCACACATCATGAATGAGGTTAAGGCTGGGTCTCCAGACAACAG
ACCCGAGTGAGCGGGAGTTCGAGCATCCAGTGCTGAGAAGATGGTTGGGTATAGGTTTTTTTAG
TATATGCACAGCGCCCTGGAGCCTAAGCAGGTGTGGTCACCTGTGTCCGCACTTGCTGTTTTGT
TGAAGACAACAGCATCCTTCACAAGTGGCCATTCTTCATTCTTACAACCAGATTGGTTTTCAGC
AGAGGCAGCTGAGGTGACCTCATGACTCACCCAGTGGCTGAGACATGGCCCAGACACAGTACTT
GGCCTTCCCCCTTGGTGCACCATCAACATCCTTTCCCATGTGCTTGCTTCTCTCAGAAGCTTGG
GGCTGGTGCTACCCCAGGAGTTACCAGTATCTTACTTTGCCTGCATGCTGCCACCTCTGTCCTG
GGTGTTGTCTTCAGTGTTGGTCTACATGGTTTCCTGTGACTTGGCCTTGGGGGGTATCCATGCA
GTTCTCACAACCCCCCCCATTTAGACTAGCCTTATCACGAGGTCATGCGCGGCTAAGTCTGGTA
TATTGAGTTCAGTCCTTGAGGTTTATATGGTAGAGGAGAGAATTGATCTTTACAAGCCCACGGT
GGCACATATATGCCTGCACACGCGCATGCAAAAACATAAGTAAAATGTAAACAAAAATATTTGC
CAAGGCTCCTTCAGACACTGACCTCTGAGGCTCTTTGCTTATTTTTATTTCTGCATTGCTTTCC
ATGATGCAAATCCTTGTGAGGGAACACTGGCACAGGTGTGTGAACACTAGGGCAGGTGTGTGAA
CACTAGGACAGGTGTGTGAACACTAGGACAGGTGTGTGAACACTAGGACAGGTGTGTGAACACT
GGCACAGGTGTGTGAACACTAGGACAGGTGTGTGAACACTAGGACAGGTGTGTGAACACTGGCA
CAGGTGTGTGAACACTAGGGCAGGTGTGTGAACACTAGGACAGGTGTGTGAACACTAGGACAGG
TGTGTGAACACTGGCACAGGTGTGTGAACACTAGGACAGGTGTGTGAACACTGGCACAGGTATA
GTAGGAAAAAAACCCTCTCAGGATTATTTGCAAAATGCTTTCATTTGGTTGGGAATTCAATAGA
AATTCGTTGGGCTTGCCCCAGGTCTGTCTAGTTTCCCACCTGTTAACCTAACTCCCAGGATACC
ATCCTCAGAGATGGCCTTAGATTGTTCCTGGAGGTGAGGGGTGAAACCACCCAAGAAGGGCTGT
GTGAGCCTGACACGAGCAAGTTACAGTGAAGCATATTAACACAAGGTTTTAAGTCCACTAAAAA
TAGTATTTTCTAATTACCAGGTGTAACACTTTTAAATAGAAATAGAAAATGGATTTTTGTGGCC
AAATGTCATATACCTGCTTTTTCTGTGGTATTGTTTTGTGGTTTTTGGTGCTGGGGATGGAGCC
CTAATGCTTATCAGGGCCCCCCCTACTGTGCTTCTCCAGCCCTGGTTGAGTTGTTTTGCATTTT
ACTACCTCCTGCAGGGGTCTAGGAGATCAGAGGCTGGTACATGCTGTTCAGATGCTATGCTATG
GGTAGTTTTAACTGTTAACTCTGGAAGAGAATTTTAATGAGAAATTATTTCTTCATTATTAGTT
GATGTAGGAAGACTCAGTCCACTGTGGGCGACACTATTCCCTAGGCAGGGTATACTAAATAGTA
TGAGAGGAGAAAGCCAGCCGAGGGCCAGCAAGGATCCGTGTTTACCTCTCTGTCTGTCAGGCCT
GTGGTGTGCCCATCTACTTCATGTTCCTGCCTTGACCTCCCTGCAATAGCACACCACAACCTGG
ACTTGTGAGCCAAATAAACCCTCTCTCCCCCAAGTTGACTTTGTCATGGTAACAGAAATGAAGC
TAAACCAGATGCTCAGGGTGATGCGCACACTGGATTGGACCCTTCTCACATTACCCTGCCCTGG
ATGTCATCCAGTACCACCCCTCTGTCCCACACAGAGGGGAGCCCAGAAGCTGCTTCAGGGAACT
ATCAGAGGAGGAGAGCTGATTCATTTCACATTAAAAAAAATGCCTTCCATGACTGCAAACGACT
CATCCGAAGCTGTGGACACTTTGTGGTCAAATTTGATTTCCTAAAGGATAAAAAATTCAATGTC
TATGTCACTGGAGTTTGGAATTGTCACTTGCCTGTATGTGGAGGAGGTTCTACAGGCGCTGATA
CTGTGTTTTGGGAGCGGGTGTACGCGTTTGTGATTTGTTAATGATATTTATCTTTAATAAAAAT
TAAGTTACAAGCAGCATAA

hide sequence

RefSeq Acc Id:

XM_017597929 ⟹ XP_017453418

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	49,053,959 - 49,100,395 (+)	NCBI
mRatBN7.2	11	35,584,273 - 35,630,922 (+)	NCBI
Rnor_6.0	11	36,638,067 - 36,683,915 (+)	NCBI

Sequence:

show sequence

TAGAGCAGATCGGTCCATGGTTGTGTCTGTGGGGTGTGGGAGTGTGGTAGGAAGACCTTCTACT
GTGGGTGGCGCTGCTCCTTGAGCAGGGGATGTTAGATGGTAAAACCATGACAGTCTTCTGAGCA
CTGGCATGTGCGTAAAGTCACTGTTTTCTGCTGGGGATTAAGGATGTGCAGTGACTAGCTGTGT
TTCAAGTTTCTGGTGATGCAAGAAGTTAGGAAGCACAATGGGTTCATCTGTTGTCACCAGTCAC
CAGGCAACAAGCTGTCAGCTCAGCAGCTGACACCTGGAAAGTCACTGGGGTGCCATCCTGCCTG
CCTGGGAGGGGTTAACTCCTGGCCTTCTGACACCTGGACTGCCTGGTAGTGATGAACTGACCTG
GAACTGTGAGCCAGTTATTCCCAAGAGACACAACCATCATTTTTGGTAGACAAACTGAGTCCAA
AAGGTTGTCTGAGAAGGTAGGGTGGAACCTCGCTCACCCTCCCCGGCTGCTCTTCAAAAGGAAT
TCATTTCCTCTTGGCTTCTACCCTGTGGCTTAGCCCTCTGGACAGACCTGAGCTCTTACCTGGC
AAAGATGGCCCACATGAAGACGAGGCTCCTTTATGCTTCCGTTCTCACGATGGGTGCGCTCTGC
TTGTACTTCAGCATGGAGTCTTTCCAAGAACTCCCCTTTGTCTTCAAGAAAAGTCACGGGAAGT
TCCTTCAGCTTCCGGAGATAGACTGCAAGCAGAAGCCGCCTTTCCTGGTGCTGCTGGTGACGTC
ATCCCACAAGCAGCTGGCGGCTCGCATGGCCATCCGCAAGACGTGGGGTAGAGAGACATCGGTG
CAGGGCCAACCCGTGAGGACCTTCTTCCTTCTGGGGTCCTCAGACAGCACGGAGGACATGGACG
CTACAGCCCTGGAGAGCGAGCAGCACCGTGACATCATCCAGAAGGATTTCAAGGACGCCTATTT
CAACTTGACCCTGAAGACCATGATGGGTATGGAATGGGTCTACCACTTTTGCCCTCAGACCGCT
TATGTGATGAAAACGGACTCAGACATGTTTGTGAATGTTGGCTATCTGACCGAACTGCTGCTAA
AGAAAAACAAAACAACCAGGTTCTTCACAGGCTACATAAAGCCCCACGACTTTCCCATCAGGCA
GAAGTTCAACAAGTGGTTTGTCAGTAAGTTCGAGTACCCCTGGGACAGGTACCCACCGTTTTGC
TCTGGTACTGGTTATGTCTTTTCCAGCGACGTGGCGATCCAAGTATACAATGTCTCAGAGAGCG
TTCCATTCATCAAGCTGGAGGATGTGTTTGTTGGGCTCTGCCTGGCCAAGCTGAAGATCCGACC
TGAGGAGCTCCACACCAAGCAGACCTTCTTCCCCGGTGGTTTACGCTTCTCTGTGTGCCGCTTT
CAGAAAATTGTGGCGTGCCATTTTATGAAGCCCCAGGACCTGCTCACTTACTGGCAGGCACTGG
AGACCTCGAAAGACGAGGACTGTCCTGCGGTCTGAGGGGAGCCTGGTGGCACCTAGGACAAACT
TCTGATAACCTTTGGTGATGGTTTTGGGAAGACCTGGGATACTGGGTCTTGCTGGGAACTGTCT
CGGGTAGAGAGAGGATGAGGAGTCCTCAGTGCCACAGGAGAAAGGATAAACACAAAAGCTGAGG
AACGACGTGGCACCCAGAGCAATAACAGATCTTGTTTTGTTCAGGCCTTTGCAGTATGCCCTCG
ATGCTTGAGACATGCCCTTAATCCACCCGTATCAGGGCTCGGCATACACAGGAAGAAGCCCTGG
ATATGATCATCCCCATTTTGTAGTTTAAAAACCAGCAGCCAGAGTCACTTACTCGTTCAAAACT
CACAGCCTGCAGACAGAGCAGGAATGAGAATCAAGTGGTATCGGGATTCAGTTGGTGGTCGGTC
CTCAACTGTGTGTCCCATGCCTTGGGAGAAGGTGGTGGTGGGGGAAGCTAAGTAGCATCCTTCA
GTCTCCTGCCCCTCGCTTCCCAATCCCTTCTACTTTTTGAATGTTAAGACTGGGATGAACCAGC
TTTCTCAGGCCTTGCCCATCGCTCGAATGATGTAGCTGGGTTCTGAGTTAACACAGATTAACCA
CTTGGTACCCAAAGTGTCCTCAGTAGGATTTTAGGAGACACACATGCCTGCAGCCTCTGTGGCT
CACATCCATGTTAGAAGGAAACTGGTTCATACGACCATAAAAGTCAGGCTGAGAAGCCACTGCT
GAGTCTTGCGATAGAGACTGACCACACTGCTGACATCCCACGATGTCTCCACTGAGCCGACTCT
GCTATGCATGTACTATAAGTGACCATTTGTAGCCCTGGGGTACTTCAGACCTCTAAGTTCAAAC
TCAAGGGCAGCCAGGTATAGGGATAGTCTGAATGAGTATCTGGGAGCTTTCCTGGGCTCTGGGC
TGTGTCTAAGCTCCAGAGATACAGAGCATGGGAGTAGCCCCAGTCTAGGGTCTTTCCTAACTTT
GGCTCTTTGCCCTGAATTTATCATGTAGTTAGTCATAGACATACTGAGTGTTGCCATTTGGAAT
TTATTCCTGTTTGGTGTCCCGACCCCTGAAGGTTTTCAGAGCTGGGTAAAAACAGGGCTTTTGA
CCATTCAGCCACAGTCACCAGACATGTAATCTTGCTCTGTATTGCAGGAATTATTGCTTTCCCA
CAGCTTTTTACTTTTCTAGATTTTACTATGAGCTTGGAGCAAAGGCTTCATGTGGCTATGTTGT
TGTCAATGTTGGAATATGCTCTCACCTGAACTCAGGAAAACTTGACAGTTGCAGCAAACACTGT
TAGGGTGGAGGAAGCTGGAAGCTGCCTAGAGGGCCTCATTTCCATACTTGTTCCTGTCTCTCCT
ACGAATCTCTTCCACAACTTCTAGAGGAAATTCTTCTGTCTGTGGCATTCTTCAAAATCATGCA
GCATCATGTTCTGGACCCTTATTGAGAATATATGAAATTCTGAACCATGTAAAGAGAAAGGGTA
TTTGCTCCTGGGTGTGTACTGTGGATTACATACACCGTCAAAACCAAACCCAGCCACATCTTCT
TTGACAGAGGGGGAAGCCAAAGTTTGTAATGTGGTGGTGTTGCTGTCTAAAGGGTGGGAGAGCT
GGCACCAGCCTCCATGCACCGTCCTTTTACTCATTCATTAGCCATATTTCTCTTTGTACCCACA
CATCATGAATGAGGTTAAGGCTGGGTCTCCAGACAACAGACCCGAGTGAGCGGGAGTTCGAGCA
TCCAGTGCTGAGAAGATGGTTGGGTATAGGTTTTTTTAGTATATGCACAGCGCCCTGGAGCCTA
AGCAGGTGTGGTCACCTGTGTCCGCACTTGCTGTTTTGTTGAAGACAACAGCATCCTTCACAAG
TGGCCATTCTTCATTCTTACAACCAGATTGGTTTTCAGCAGAGGCAGCTGAGGTGACCTCATGA
CTCACCCAGTGGCTGAGACATGGCCCAGACACAGTACTTGGCCTTCCCCCTTGGTGCACCATCA
ACATCCTTTCCCATGTGCTTGCTTCTCTCAGAAGCTTGGGGCTGGTGCTACCCCAGGAGTTACC
AGTATCTTACTTTGCCTGCATGCTGCCACCTCTGTCCTGGGTGTTGTCTTCAGTGTTGGTCTAC
ATGGTTTCCTGTGACTTGGCCTTGGGGGGTATCCATGCAGTTCTCACAACCCCCCCCATTTAGA
CTAGCCTTATCACGAGGTCATGCGCGGCTAAGTCTGGTATATTGAGTTCAGTCCTTGAGGTTTA
TATGGTAGAGGAGAGAATTGATCTTTACAAGCCCACGGTGGCACATATATGCCTGCACACGCGC
ATGCAAAAACATAAGTAAAATGTAAACAAAAATATTTGCCAAGGCTCCTTCAGACACTGACCTC
TGAGGCTCTTTGCTTATTTTTATTTCTGCATTGCTTTCCATGATGCAAATCCTTGTGAGGGAAC
ACTGGCACAGGTGTGTGAACACTAGGGCAGGTGTGTGAACACTAGGACAGGTGTGTGAACACTA
GGACAGGTGTGTGAACACTAGGACAGGTGTGTGAACACTGGCACAGGTGTGTGAACACTAGGAC
AGGTGTGTGAACACTAGGACAGGTGTGTGAACACTGGCACAGGTGTGTGAACACTAGGGCAGGT
GTGTGAACACTAGGACAGGTGTGTGAACACTAGGACAGGTGTGTGAACACTGGCACAGGTGTGT
GAACACTAGGACAGGTGTGTGAACACTGGCACAGGTATAGTAGGAAAAAAACCCTCTCAGGATT
ATTTGCAAAATGCTTTCATTTGGTTGGGAATTCAATAGAAATTCGTTGGGCTTGCCCCAGGTCT
GTCTAGTTTCCCACCTGTTAACCTAACTCCCAGGATACCATCCTCAGAGATGGCCTTAGATTGT
TCCTGGAGGTGAGGGGTGAAACCACCCAAGAAGGGCTGTGTGAGCCTGACACGAGCAAGTTACA
GTGAAGCATATTAACACAAGGTTTTAAGTCCACTAAAAATAGTATTTTCTAATTACCAGGTGTA
ACACTTTTAAATAGAAATAGAAAATGGATTTTTGTGGCCAAATGTCATATACCTGCTTTTTCTG
TGGTATTGTTTTGTGGTTTTTGGTGCTGGGGATGGAGCCCTAATGCTTATCAGGGCCCCCCCTA
CTGTGCTTCTCCAGCCCTGGTTGAGTTGTTTTGCATTTTACTACCTCCTGCAGGGGTCTAGGAG
ATCAGAGGCTGGTACATGCTGTTCAGATGCTATGCTATGGGTAGTTTTAACTGTTAACTCTGGA
AGAGAATTTTAATGAGAAATTATTTCTTCATTATTAGTTGATGTAGGAAGACTCAGTCCACTGT
GGGCGACACTATTCCCTAGGCAGGGTATACTAAATAGTATGAGAGGAGAAAGCCAGCCGAGGGC
CAGCAAGGATCCGTGTTTACCTCTCTGTCTGTCAGGCCTGTGGTGTGCCCATCTACTTCATGTT
CCTGCCTTGACCTCCCTGCAATAGCACACCACAACCTGGACTTGTGAGCCAAATAAACCCTCTC
TCCCCCAAGTTGACTTTGTCATGGTAACAGAAATGAAGCTAAACCAGATGCTCAGGGTGATGCG
CACACTGGATTGGACCCTTCTCACATTACCCTGCCCTGGATGTCATCCAGTACCACCCCTCTGT
CCCACACAGAGGGGAGCCCAGAAGCTGCTTCAGGGAACTATCAGAGGAGGAGAGCTGATTCATT
TCACATTAAAAAAAATGCCTTCCATGACTGCAAACGACTCATCCGAAGCTGTGGACACTTTGTG
GTCAAATTTGATTTCCTAAAGGATAAAAAATTCAATGTCTATGTCACTGGAGTTTGGAATTGTC
ACTTGCCTGTATGTGGAGGAGGTTCTACAGGCGCTGATACTGTGTTTTGGGAGCGGGTGTACGC
GTTTGTGATTTGTTAATGATATTTATCTTTAATAAAAATTAAGTTACAAGCAGCATAA

hide sequence

RefSeq Acc Id:

XM_063270406 ⟹ XP_063126476

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	49,053,959 - 49,100,395 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001099357	(Get FASTA)	NCBI Sequence Viewer
	XP_017453417	(Get FASTA)	NCBI Sequence Viewer
	XP_017453418	(Get FASTA)	NCBI Sequence Viewer
	XP_063126476	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL76658	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000045319
	ENSRNOP00000045319.3
	ENSRNOP00000082456
	ENSRNOP00000082456.1
	ENSRNOP00000088559.1
	ENSRNOP00000089523.1
	ENSRNOP00000105311.1
	ENSRNOP00000106597
	ENSRNOP00000106597.1
	ENSRNOP00000109496.1
	ENSRNOP00000111107.1
	ENSRNOP00000112618.1
	ENSRNOP00000112674.1

RefSeq Acc Id:

NP_001099357 ⟸ NM_001105887

- UniProtKB:

D4AB20 (UniProtKB/TrEMBL), A6KPR5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAHMKTRLLYASVLTMGALCLYFSMESFQELPFVFKKSHGKFLQLPEIDCKQKPPFLVLLVTSS
HKQLAARMAIRKTWGRETSVQGQPVRTFFLLGSSDSTEDMDATALESEQHRDIIQKDFKDAYFN
LTLKTMMGMEWVYHFCPQTAYVMKTDSDMFVNVGYLTELLLKKNKTTRFFTGYIKPHDFPIRQK
FNKWFVSKFEYPWDRYPPFCSGTGYVFSSDVAIQVYNVSESVPFIKLEDVFVGLCLAKLKIRPE
ELHTKQTFFPGGLRFSVCRFQKIVACHFMKPQDLLTYWQALETSKDEDCPAV

hide sequence

RefSeq Acc Id:	XP_017453418 ⟸ XM_017597929
- Peptide Label:	isoform X1
- UniProtKB:	D4AB20 (UniProtKB/TrEMBL), A6KPR5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAHMKTRLLYASVLTMGALCLYFSMESFQELPFVFKKSHGKFLQLPEIDCKQKPPFLVLLVTSS HKQLAARMAIRKTWGRETSVQGQPVRTFFLLGSSDSTEDMDATALESEQHRDIIQKDFKDAYFN LTLKTMMGMEWVYHFCPQTAYVMKTDSDMFVNVGYLTELLLKKNKTTRFFTGYIKPHDFPIRQK FNKWFVSKFEYPWDRYPPFCSGTGYVFSSDVAIQVYNVSESVPFIKLEDVFVGLCLAKLKIRPE ELHTKQTFFPGGLRFSVCRFQKIVACHFMKPQDLLTYWQALETSKDEDCPAV hide sequence

RefSeq Acc Id:	XP_017453417 ⟸ XM_017597928
- Peptide Label:	isoform X1
- UniProtKB:	D4AB20 (UniProtKB/TrEMBL), A6KPR5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAHMKTRLLYASVLTMGALCLYFSMESFQELPFVFKKSHGKFLQLPEIDCKQKPPFLVLLVTSS HKQLAARMAIRKTWGRETSVQGQPVRTFFLLGSSDSTEDMDATALESEQHRDIIQKDFKDAYFN LTLKTMMGMEWVYHFCPQTAYVMKTDSDMFVNVGYLTELLLKKNKTTRFFTGYIKPHDFPIRQK FNKWFVSKFEYPWDRYPPFCSGTGYVFSSDVAIQVYNVSESVPFIKLEDVFVGLCLAKLKIRPE ELHTKQTFFPGGLRFSVCRFQKIVACHFMKPQDLLTYWQALETSKDEDCPAV hide sequence

Ensembl Acc Id:

ENSRNOP00000045319 ⟸ ENSRNOT00000050178

Ensembl Acc Id:

ENSRNOP00000088559 ⟸ ENSRNOT00000105039

Ensembl Acc Id:

ENSRNOP00000082456 ⟸ ENSRNOT00000119017

Ensembl Acc Id:

ENSRNOP00000089523 ⟸ ENSRNOT00000116843

RefSeq Acc Id:	XP_063126476 ⟸ XM_063270406
- Peptide Label:	isoform X1
- UniProtKB:	A6KPR5 (UniProtKB/TrEMBL), D4AB20 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000112674 ⟸ ENSRNOT00000163673

Ensembl Acc Id:

ENSRNOP00000109496 ⟸ ENSRNOT00000158124

Ensembl Acc Id:

ENSRNOP00000112618 ⟸ ENSRNOT00000153397

Ensembl Acc Id:

ENSRNOP00000105311 ⟸ ENSRNOT00000134692

Ensembl Acc Id:

ENSRNOP00000111107 ⟸ ENSRNOT00000124557

Ensembl Acc Id:

ENSRNOP00000106597 ⟸ ENSRNOT00000163103

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AB20-F1-model_v2	AlphaFold	D4AB20	1-308	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306727	AgrOrtholog
BioCyc Gene	G2FUF-21707	BioCyc
BioCyc Pathway	PWY-7433 [mucin core 1 and core 2 O-glycosylation]	BioCyc
BioCyc Pathway Image	PWY-7433	BioCyc
Ensembl Genes	ENSRNOG00000030983	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000050178	ENTREZGENE
	ENSRNOT00000050178.6	UniProtKB/TrEMBL
	ENSRNOT00000105039.2	UniProtKB/TrEMBL
	ENSRNOT00000116843.2	UniProtKB/TrEMBL
	ENSRNOT00000119017	ENTREZGENE
	ENSRNOT00000119017.2	UniProtKB/TrEMBL
	ENSRNOT00000124557.1	UniProtKB/TrEMBL
	ENSRNOT00000134692.1	UniProtKB/TrEMBL
	ENSRNOT00000153397.1	UniProtKB/TrEMBL
	ENSRNOT00000158124.1	UniProtKB/TrEMBL
	ENSRNOT00000163103	ENTREZGENE
	ENSRNOT00000163103.1	UniProtKB/TrEMBL
	ENSRNOT00000163673.1	UniProtKB/TrEMBL
Gene3D-CATH	3.90.550.50	UniProtKB/TrEMBL
InterPro	Glyco_trans_31	UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/TrEMBL
KEGG Report	rno:288161	UniProtKB/TrEMBL
NCBI Gene	288161	ENTREZGENE
PANTHER	BETA-1,3-GALACTOSYLTRANSFERASE 5	UniProtKB/TrEMBL
	Glyco_trans_31	UniProtKB/TrEMBL
Pfam	Galactosyl_T	UniProtKB/TrEMBL
PhenoGen	B3galt5	PhenoGen
RatGTEx	ENSRNOG00000030983	RatGTEx
Superfamily-SCOP	SSF53448	UniProtKB/TrEMBL
UniProt	A6KPR5	ENTREZGENE, UniProtKB/TrEMBL
	D4AB20	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-12-02	B3galt5	Beta-1,3-galactosyltransferase 5	B3galt5	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	B3galt5	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5	B3galt5_predicted	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	B3galt5_predicted	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Annotations - KEGG (archival)

BioCyc Pathways

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Imported Annotations - KEGG (archival)

BioCyc Pathways