Nudt7 (nudix hydrolase 7) - Rat Genome Database

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Gene: Nudt7 (nudix hydrolase 7) Rattus norvegicus
Analyze
Symbol: Nudt7
Name: nudix hydrolase 7
RGD ID: 1306719
Description: Predicted to enable coenzyme A diphosphatase activity; magnesium ion binding activity; and snoRNA binding activity. Predicted to be involved in nucleoside phosphate catabolic process. Predicted to act upstream of or within acetyl-CoA catabolic process and brown fat cell differentiation. Predicted to be active in peroxisome. Orthologous to human NUDT7 (nudix hydrolase 7); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3,3',5-triiodo-L-thyronine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC102555567; LOC361413; nudix (nucleoside diphosphate linked moiety X)-type motif 7; nudix motif 7; peroxisomal coenzyme A diphosphatase NUDT7; peroxisomal coenzyme A diphosphatase NUDT7-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81959,034,808 - 59,049,148 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1959,034,839 - 59,063,994 (+)EnsemblGRCr8
mRatBN7.21942,125,679 - 42,151,198 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1942,125,711 - 42,151,081 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1948,949,985 - 48,964,251 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01949,603,256 - 49,617,524 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01951,851,962 - 51,866,240 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01946,455,745 - 46,470,070 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1946,455,761 - 46,482,050 (+)Ensemblrn6Rnor6.0
Rnor_5.01957,278,677 - 57,293,046 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41944,181,782 - 44,196,976 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1941,436,677 - 41,450,937 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
2,4-dinitrotoluene  (EXP)
2-acetamidofluorene  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,3',5-triiodo-L-thyronine  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-\{[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbonyl]amino\}benzoic acid  (ISO)
4-amino-2,6-dinitrotoluene  (EXP)
5-aza-2'-deoxycytidine  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aldrin  (ISO)
all-trans-retinoic acid  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
choline  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (ISO)
clofibric acid  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
dioxygen  (ISO)
diquat  (ISO)
dorsomorphin  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
finasteride  (EXP)
fipronil  (EXP)
flutamide  (EXP)
folic acid  (ISO)
genistein  (EXP)
gentamycin  (EXP)
hydralazine  (ISO)
indometacin  (EXP)
inulin  (ISO)
L-methionine  (ISO)
leflunomide  (EXP)
methylmercury chloride  (ISO)
monosodium L-glutamate  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
nefazodone  (EXP)
nickel atom  (ISO)
nickel sulfate  (ISO)
nimesulide  (EXP)
okadaic acid  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
parathion  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
phenobarbital  (ISO)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
propiconazole  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
senecionine  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
streptozocin  (ISO)
sulforaphane  (ISO)
temozolomide  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (EXP)
titanium dioxide  (ISO)
trichostatin A  (ISO)
Triptolide  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vincristine  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
peroxisome  (IBA,ISO)

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11415433   PMID:12790796   PMID:18492766   PMID:20178365   PMID:21070968  


Genomics

Comparative Map Data
Nudt7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81959,034,808 - 59,049,148 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1959,034,839 - 59,063,994 (+)EnsemblGRCr8
mRatBN7.21942,125,679 - 42,151,198 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1942,125,711 - 42,151,081 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1948,949,985 - 48,964,251 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01949,603,256 - 49,617,524 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01951,851,962 - 51,866,240 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01946,455,745 - 46,470,070 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1946,455,761 - 46,482,050 (+)Ensemblrn6Rnor6.0
Rnor_5.01957,278,677 - 57,293,046 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41944,181,782 - 44,196,976 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1941,436,677 - 41,450,937 (+)NCBICelera
Cytogenetic Map19q12NCBI
NUDT7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381677,722,514 - 77,742,260 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1677,722,485 - 77,742,260 (+)Ensemblhg38GRCh38
GRCh371677,756,411 - 77,776,157 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361676,313,912 - 76,333,655 (+)NCBIBuild 36Build 36hg18NCBI36
Celera1662,054,090 - 62,073,833 (+)NCBICelera
Cytogenetic Map16q23.1NCBI
HuRef1663,512,539 - 63,532,315 (+)NCBIHuRef
CHM1_11679,167,909 - 79,187,677 (+)NCBICHM1_1
T2T-CHM13v2.01683,778,636 - 83,798,355 (+)NCBIT2T-CHM13v2.0
Nudt7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398114,860,314 - 114,881,471 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8114,860,297 - 114,881,479 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm388114,133,574 - 114,154,731 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8114,133,557 - 114,154,739 (+)Ensemblmm10GRCm38
MGSCv378116,657,479 - 116,676,205 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv368117,019,592 - 117,038,289 (+)NCBIMGSCv36mm8
Celera8118,345,752 - 118,364,538 (+)NCBICelera
Cytogenetic Map8E1NCBI
cM Map860.53NCBI
Nudt7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955522944,565 - 960,244 (+)Ensembl
ChiLan1.0NW_004955522945,186 - 960,094 (+)NCBIChiLan1.0ChiLan1.0
NUDT7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21887,455,807 - 87,477,524 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11693,375,260 - 93,396,912 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01658,312,917 - 58,333,256 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11677,747,944 - 77,767,687 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1677,747,863 - 77,801,651 (+)EnsemblpanPan2panpan1.1
NUDT7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1573,515,819 - 73,527,780 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl573,516,166 - 73,527,716 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha573,463,629 - 73,475,592 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0573,822,491 - 73,834,439 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl573,822,818 - 73,834,399 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1573,762,630 - 73,774,557 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0573,598,591 - 73,610,719 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0574,082,829 - 74,094,799 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Nudt7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934933,496,220 - 33,509,844 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647526,079,275 - 26,089,889 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647526,079,298 - 26,095,466 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NUDT7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl610,158,688 - 10,173,980 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1610,161,959 - 10,174,006 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2610,102,285 - 10,114,189 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NUDT7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1563,212,163 - 63,231,465 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl563,212,226 - 63,231,650 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604712,817,483 - 12,836,766 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nudt7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247469,228,321 - 9,242,830 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247469,228,656 - 9,242,808 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Nudt7
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11733,787,480 - 33,802,696 (+)NCBIRrattus_CSIRO_v1

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:303
Count of miRNA genes:194
Interacting mature miRNAs:230
Transcripts:ENSRNOT00000034012
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)191922068964220689Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)194622677874246245Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032907674246245Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)193236531174246245Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)192409397369093973Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)193628974246245Rat
2303628Vencon9Ventilatory control QTL 90.005respiration trait (VT:0001943)minute ventilation (CMO:0000132)192318858668188586Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191083361874246245Rat
2313395Anxrr26Anxiety related response QTL 26aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)194438513474246245Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)193253961574246245Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)193177788874246245Rat
1554318Bmd5Bone mineral density QTL 512.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)192318858668188586Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)192010930665109306Rat
1549835Tcas7Tongue tumor susceptibility QTL 70.001tongue integrity trait (VT:0010553)squamous cell carcinoma of the head and neck tumor number (CMO:0001876)194172254674246245Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19219431774246245Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19219431774246245Rat

Markers in Region
D19Rat90  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81959,039,436 - 59,039,661 (+)Marker Load Pipeline
mRatBN7.21942,130,309 - 42,130,534 (+)MAPPERmRatBN7.2
Rnor_6.01946,460,372 - 46,460,596NCBIRnor6.0
Rnor_5.01957,283,283 - 57,283,507UniSTSRnor5.0
RGSC_v3.41944,186,387 - 44,186,608RGDRGSC3.4
RGSC_v3.41944,186,388 - 44,186,612UniSTSRGSC3.4
Celera1941,441,228 - 41,441,452UniSTS
RGSC_v3.11944,191,268 - 44,191,489RGD
RH 3.4 Map19554.8UniSTS
RH 3.4 Map19554.8RGD
RH 2.0 Map19570.4RGD
FHH x ACI Map1933.46RGD
Cytogenetic Map19q12UniSTS
RH130335  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21942,139,774 - 42,139,994 (+)MAPPERmRatBN7.2
Rnor_6.01946,469,826 - 46,470,045NCBIRnor6.0
Rnor_5.01957,292,798 - 57,293,017UniSTSRnor5.0
RGSC_v3.41944,196,728 - 44,196,947UniSTSRGSC3.4
Celera1941,450,693 - 41,450,912UniSTS
RH 3.4 Map19549.7UniSTS
Cytogenetic Map19q12UniSTS
RH133169  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81959,047,513 - 59,047,729 (+)Marker Load Pipeline
mRatBN7.21942,138,386 - 42,138,602 (+)MAPPERmRatBN7.2
Rnor_6.01946,468,450 - 46,468,665NCBIRnor6.0
Rnor_5.01957,291,361 - 57,291,576UniSTSRnor5.0
RGSC_v3.41944,194,466 - 44,194,681UniSTSRGSC3.4
Celera1941,449,303 - 41,449,518UniSTS
RH 3.4 Map19586.3UniSTS
Cytogenetic Map19q12UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 66 165 91 90 59 91 59 6 354 190 11 144 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001305426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001305427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006255677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017601321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039097864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063278139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063278140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063278141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CB582462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM098914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM122430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM141049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000034012   ⟹   ENSRNOP00000032779
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1959,034,839 - 59,049,140 (+)Ensembl
mRatBN7.2 Ensembl1942,125,711 - 42,140,014 (+)Ensembl
Rnor_6.0 Ensembl1946,455,761 - 46,470,070 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093238   ⟹   ENSRNOP00000076192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1959,034,839 - 59,049,148 (+)Ensembl
mRatBN7.2 Ensembl1942,125,752 - 42,140,019 (+)Ensembl
Rnor_6.0 Ensembl1946,455,878 - 46,469,625 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093392   ⟹   ENSRNOP00000076103
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1959,034,839 - 59,063,994 (+)Ensembl
mRatBN7.2 Ensembl1942,125,752 - 42,151,081 (+)Ensembl
Rnor_6.0 Ensembl1946,455,859 - 46,482,050 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093714   ⟹   ENSRNOP00000076259
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1946,465,647 - 46,466,119 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000133063   ⟹   ENSRNOP00000103127
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1959,034,839 - 59,049,852 (+)Ensembl
RefSeq Acc Id: NM_001305426   ⟹   NP_001292355
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,034,888 - 59,049,148 (+)NCBI
mRatBN7.21942,125,759 - 42,140,019 (+)NCBI
Rnor_6.01946,455,823 - 46,470,070 (+)NCBI
Celera1941,436,677 - 41,450,937 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001305427   ⟹   NP_001292356
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,034,888 - 59,049,148 (+)NCBI
mRatBN7.21942,125,759 - 42,140,019 (+)NCBI
Rnor_6.01946,455,823 - 46,470,070 (+)NCBI
Celera1941,436,677 - 41,450,937 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017601321   ⟹   XP_017456810
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,034,808 - 59,049,148 (+)NCBI
mRatBN7.21942,125,679 - 42,140,019 (+)NCBI
Rnor_6.01946,455,747 - 46,470,070 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039097863   ⟹   XP_038953791
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,034,808 - 59,049,148 (+)NCBI
mRatBN7.21942,125,679 - 42,140,019 (+)NCBI
RefSeq Acc Id: XM_039097864   ⟹   XP_038953792
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,037,725 - 59,049,148 (+)NCBI
mRatBN7.21942,128,743 - 42,140,019 (+)NCBI
RefSeq Acc Id: XM_063278139   ⟹   XP_063134209
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,034,808 - 59,049,148 (+)NCBI
RefSeq Acc Id: XM_063278140   ⟹   XP_063134210
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,034,808 - 59,049,148 (+)NCBI
RefSeq Acc Id: XM_063278141   ⟹   XP_063134211
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81959,034,808 - 59,049,148 (+)NCBI
RefSeq Acc Id: NP_001292356   ⟸   NM_001305427
- Peptide Label: isoform 2
- UniProtKB: A6IZE0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001292355   ⟸   NM_001305426
- Peptide Label: isoform 1
- UniProtKB: A0A1W2Q6B7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017456810   ⟸   XM_017601321
- Peptide Label: isoform X5
- UniProtKB: A6IZD8 (UniProtKB/TrEMBL),   A6IZD7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000032779   ⟸   ENSRNOT00000034012
Ensembl Acc Id: ENSRNOP00000076259   ⟸   ENSRNOT00000093714
Ensembl Acc Id: ENSRNOP00000076103   ⟸   ENSRNOT00000093392
Ensembl Acc Id: ENSRNOP00000076192   ⟸   ENSRNOT00000093238
RefSeq Acc Id: XP_038953791   ⟸   XM_039097863
- Peptide Label: isoform X3
- UniProtKB: A6IZD7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038953792   ⟸   XM_039097864
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063134209   ⟸   XM_063278139
- Peptide Label: isoform X1
- UniProtKB: A6IZD7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063134210   ⟸   XM_063278140
- Peptide Label: isoform X2
- UniProtKB: D3ZV74 (UniProtKB/TrEMBL),   A6IZD7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063134211   ⟸   XM_063278141
- Peptide Label: isoform X4
- UniProtKB: A6IZD7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000103127   ⟸   ENSRNOT00000133063
Protein Domains
Nudix hydrolase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZV74-F1-model_v2 AlphaFold D3ZV74 1-260 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13701168
Promoter ID:EPDNEW_R11685
Type:initiation region
Name:Nudt7_1
Description:nudix hydrolase 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01946,455,808 - 46,455,868EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1306719 AgrOrtholog
BioCyc Gene G2FUF-5599 BioCyc
Ensembl Genes ENSRNOG00000011976 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000034012 ENTREZGENE
  ENSRNOT00000034012.8 UniProtKB/TrEMBL
  ENSRNOT00000093238 ENTREZGENE
  ENSRNOT00000093238.3 UniProtKB/TrEMBL
  ENSRNOT00000093392.3 UniProtKB/TrEMBL
  ENSRNOT00000133063 ENTREZGENE
  ENSRNOT00000133063.1 UniProtKB/TrEMBL
Gene3D-CATH Nucleoside Triphosphate Pyrophosphohydrolase UniProtKB/TrEMBL
InterPro CoAse UniProtKB/TrEMBL
  NUDIX_hydrolase_dom UniProtKB/TrEMBL
  NUDIX_hydrolase_dom-like UniProtKB/TrEMBL
  NUDIX_hydrolase_NudL_CS UniProtKB/TrEMBL
NCBI Gene 361413 ENTREZGENE
PANTHER PEROXISOMAL COENZYME A DIPHOSPHATASE NUDT7 UniProtKB/TrEMBL
  PTHR12992 UniProtKB/TrEMBL
Pfam NUDIX UniProtKB/TrEMBL
PhenoGen Nudt7 PhenoGen
PROSITE NUDIX UniProtKB/TrEMBL
  NUDIX_COA UniProtKB/TrEMBL
RatGTEx ENSRNOG00000011976 RatGTEx
Superfamily-SCOP NUDIX_hydrolase UniProtKB/TrEMBL
UniProt A0A1W2Q618_RAT UniProtKB/TrEMBL
  A0A1W2Q6B7 ENTREZGENE, UniProtKB/TrEMBL
  A0ABK0LED9_RAT UniProtKB/TrEMBL
  A6IZD7 ENTREZGENE, UniProtKB/TrEMBL
  A6IZD8 ENTREZGENE, UniProtKB/TrEMBL
  A6IZE0 ENTREZGENE, UniProtKB/TrEMBL
  D3ZV74 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-10 Nudt7  nudix hydrolase 7  Nudt7  nudix (nucleoside diphosphate linked moiety X)-type motif 7  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2014-01-14 Nudt7  nudix (nucleoside diphosphate linked moiety X)-type motif 7  LOC102555567  peroxisomal coenzyme A diphosphatase NUDT7-like  Data merged from RGD:7636577 737654 APPROVED
2013-12-18 LOC102555567  peroxisomal coenzyme A diphosphatase NUDT7-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 Nudt7  nudix (nucleoside diphosphate linked moiety X)-type motif 7   Nudt7_predicted  nudix (nucleoside diphosphate linked moiety X)-type motif 7 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Nudt7_predicted  nudix (nucleoside diphosphate linked moiety X)-type motif 7 (predicted)      Symbol and Name status set to approved 70820 APPROVED