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Gene: Zfp523 (zinc finger protein 523) Rattus norvegicus

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Symbol:

Zfp523

Name:

zinc finger protein 523

RGD ID:

1306239

Description:

Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF76 (zinc finger protein 76); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; DDT.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC361809; MGC188390; zinc finger protein 76; zinc finger protein 76 (expressed in testis); Znf76

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF76 (zinc finger protein 76)	HGNC	EggNOG, Ensembl, HomoloGene, NCBI, OMA, OrthoDB, OrthoMCL, Treefam
Mus musculus (house mouse):	Zfp523 (zinc finger protein 523)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Znf76 (zinc finger protein 76)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF76 (zinc finger protein 76)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF76 (zinc finger protein 76)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Znf76 (zinc finger protein 76)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF76 (zinc finger protein 76)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF76 (zinc finger protein 76)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Znf76 (zinc finger protein 76)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Znf76 (zinc finger protein 76)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	ZNF76 (zinc finger protein 76)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfp523 (zinc finger protein 523)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfp523 (zinc finger protein 523)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	znf76 (zinc finger protein 76)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG42726	Alliance	DIOPT (Ensembl Compara\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	6,234,951 - 6,268,258 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	20	6,236,522 - 6,268,257 (+)	Ensembl				GRCr8
mRatBN7.2	20	6,234,884 - 6,266,512 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	6,243,582 - 6,266,511 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	20	6,956,442 - 6,979,081 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	6,318,265 - 6,340,907 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	6,797,847 - 6,820,157 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	7,750,786 - 7,786,020 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	7,762,327 - 7,786,049 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	20	9,964,697 - 9,985,908 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	20	6,423,716 - 6,446,498 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	20	7,802,044 - 7,822,922 (+)	NCBI		Celera
RGSC_v3.1	20	6,417,782 - 6,446,723 (+)	NCBI
Cytogenetic Map	20	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

17alpha-ethynylestradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,4,4'-trichlorobiphenyl (ISO)

aflatoxin B1 (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

butanal (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

clofibrate (ISO)

DDT (EXP)

ethanol (ISO)

fenthion (ISO)

folic acid (ISO)

lead(0) (ISO)

mercury dichloride (EXP)

N,N-diethyl-m-toluamide (EXP)

paracetamol (EXP,ISO)

PCB138 (ISO)

pentachlorophenol (ISO)

pentanal (ISO)

permethrin (EXP)

propanal (ISO)

sodium arsenite (ISO)

tamoxifen (ISO)

testosterone (ISO)

tetrachloroethene (ISO)

tetrachloromethane (EXP)

thioacetamide (EXP)

thiram (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

urethane (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

negative regulation of transcription by RNA polymerase II (IEA,ISO)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

chromatin (IEA,ISO)

chromosome (IEA)

nucleus (IBA,IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA,ISO)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA,IEA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IEA,ISO)

metal ion binding (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA)

sequence-specific DNA binding (IEA,ISO)

sequence-specific double-stranded DNA binding (IEA,ISO)

transcription cis-regulatory region binding (IEA)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:10893243	PMID:12477932

Genomics

Comparative Map Data

Zfp523
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	6,234,951 - 6,268,258 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	20	6,236,522 - 6,268,257 (+)	Ensembl				GRCr8
mRatBN7.2	20	6,234,884 - 6,266,512 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	6,243,582 - 6,266,511 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	20	6,956,442 - 6,979,081 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	6,318,265 - 6,340,907 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	6,797,847 - 6,820,157 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	7,750,786 - 7,786,020 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	7,762,327 - 7,786,049 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	20	9,964,697 - 9,985,908 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	20	6,423,716 - 6,446,498 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	20	7,802,044 - 7,822,922 (+)	NCBI		Celera
RGSC_v3.1	20	6,417,782 - 6,446,723 (+)	NCBI
Cytogenetic Map	20	p12	NCBI

ZNF76
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	35,259,533 - 35,295,985 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	35,258,909 - 35,295,985 (+)	Ensembl			hg38	GRCh38
GRCh37	6	35,227,512 - 35,263,762 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	35,335,488 - 35,371,738 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	35,335,487 - 35,371,738	NCBI
Celera	6	36,781,476 - 36,817,719 (+)	NCBI		Celera
Cytogenetic Map	6	p21.31	NCBI
HuRef	6	34,948,737 - 34,984,978 (+)	NCBI		HuRef
CHM1_1	6	35,229,594 - 35,265,800 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	35,082,556 - 35,119,066 (+)	NCBI		T2T-CHM13v2.0

Zfp523
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	28,396,136 - 28,424,860 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	28,396,103 - 28,424,860 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	28,177,196 - 28,205,886 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	28,177,129 - 28,205,886 (+)	Ensembl			mm10	GRCm38
MGSCv37	17	28,314,363 - 28,342,831 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	27,905,007 - 27,933,473 (+)	NCBI		MGSCv36	mm8
Celera	17	28,733,196 - 28,759,767 (+)	NCBI		Celera
Cytogenetic Map	17	A3.3	NCBI
cM Map	17	14.63	NCBI

Znf76
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	3,218,453 - 3,250,788 (+)	Ensembl
ChiLan1.0	NW_004955437	3,218,453 - 3,250,788 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZNF76
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	49,728,071 - 49,764,533 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	45,596,065 - 45,632,513 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	34,822,229 - 34,858,647 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	35,917,678 - 35,954,290 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	35,917,735 - 35,954,290 (+)	Ensembl			panPan2	panpan1.1

ZNF76
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	4,427,059 - 4,462,168 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	4,427,054 - 4,639,988 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	4,443,472 - 4,478,580 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	4,765,331 - 4,800,469 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	4,765,320 - 4,978,021 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	4,424,268 - 4,459,320 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	4,505,523 - 4,540,413 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	4,605,468 - 4,640,583 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Znf76
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	40,002,943 - 40,037,234 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936476	23,922,994 - 23,956,930 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936476	23,922,996 - 23,957,092 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF76
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	31,161,320 - 31,192,575 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	7	31,161,130 - 31,192,321 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	36,244,886 - 36,255,715 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF76
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	36,828,246 - 36,865,158 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	36,828,005 - 36,865,090 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666044	35,170,138 - 35,212,782 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf76
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	22,126,033 - 22,158,271 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624754	22,126,033 - 22,158,488 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Znf76
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	18	5,651,840 - 5,680,922 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Zfp523
170 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	424
Count of miRNA genes:	227
Interacting mature miRNAs:	265
Transcripts:	ENSRNOT00000000595
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4889610	Pancm3	Pancreatic morphology QTL 3	3.75	0.001	pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	20	4189476	49189476	Rat
61474	Eae1	Experimental allergic encephalomyelitis QTL 1	3		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	20	1	6693431	Rat
2317057	Aia27	Adjuvant induced arthritis QTL 27	2.83		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	20	1	26925056	Rat
1641915	Colcr9	Colorectal carcinoma resistance QTL 9	2.97	0.0024	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	20	1	33724594	Rat
7387283	Uae44	Urinary albumin excretion QTL 44		0.1712	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	20	1	26128279	Rat
7411668	Foco32	Food consumption QTL 32	8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	36600300	Rat
2305926	Iddm37	Insulin dependent diabetes mellitus QTL 37	6		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	20	1533083	46533083	Rat
1354642	Despr15	Despair related QTL 15		0.0027	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	20	1	24164241	Rat
1558640	Prcs2	Prostate cancer susceptibility QTL 2	3.3		prostate integrity trait (VT:0010571)	percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)	20	1	34066551	Rat
1331772	Cdexp2	CD45RC expression in CD8 T cells QTL 2	5.7		CD8-positive T cell quantity (VT:0008077)	blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)	20	3626323	10078622	Rat
8694189	Bw153	Body weight QTL 153	3.13	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	20	1	29193376	Rat
70154	Insul2	Insulin level QTL 2	3.75		blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	20	1	6693431	Rat
4889857	Pur27	Proteinuria QTL 27	12.2	0.001	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	20	1	27341128	Rat
1300152	Bp195	Blood pressure QTL 195	3.46		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	20	3626323	9244918	Rat
9590109	Sffal8	Serum free fatty acids level QTL 8	5.32	0.01	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	20	1	29193376	Rat
9589155	Insul32	Insulin level QTL 32	6.38	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	20	1	29193376	Rat
9590275	Scort15	Serum corticosterone level QTL 15	3.48	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	29193376	Rat
7411650	Foco23	Food consumption QTL 23	20.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	29193376	Rat
61432	Cia1	Collagen induced arthritis QTL 1			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	20	1	14100378	Rat
2317851	Alcrsp22	Alcohol response QTL 22	3.2	0.05	response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27341128	Rat
1641893	Alcrsp7	Alcohol response QTL 7			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	20	1	27341128	Rat
6893685	Bw111	Body weight QTL 111	2.7	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	20	1	32578510	Rat
9590252	Scort12	Serum corticosterone level QTL 12	20.46	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	36600300	Rat

Markers in Region

RH132917

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	20	6,266,274 - 6,266,489 (+)	MAPPER	mRatBN7.2
Rnor_6.0	20	7,785,783 - 7,785,997	NCBI	Rnor6.0
Rnor_5.0	20	9,985,671 - 9,985,885	UniSTS	Rnor5.0
RGSC_v3.4	20	6,446,261 - 6,446,475	UniSTS	RGSC3.4
Celera	20	7,822,685 - 7,822,899	UniSTS
RH 3.4 Map	20	75.93	UniSTS
Cytogenetic Map	20	p12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	161	91	90	59	92	59	6	356	192	11	140	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001134755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772820	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098817	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC132760	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC168249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000000595 ⟹ ENSRNOP00000000595

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	20	6,236,522 - 6,268,257 (+)	Ensembl
mRatBN7.2 Ensembl	20	6,243,582 - 6,266,511 (+)	Ensembl
Rnor_6.0 Ensembl	20	7,762,327 - 7,786,019 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000084771 ⟹ ENSRNOP00000074943

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	20	6,236,522 - 6,268,257 (+)	Ensembl
mRatBN7.2 Ensembl	20	6,243,582 - 6,266,511 (+)	Ensembl
Rnor_6.0 Ensembl	20	7,767,395 - 7,786,049 (+)	Ensembl

RefSeq Acc Id:

NM_001134755 ⟹ NP_001128227

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	6,245,328 - 6,268,258 (+)	NCBI
mRatBN7.2	20	6,243,582 - 6,266,512 (+)	NCBI
Rnor_6.0	20	7,762,327 - 7,786,020 (+)	NCBI
Rnor_5.0	20	9,964,697 - 9,985,908 (+)	NCBI
RGSC_v3.4	20	6,423,716 - 6,446,498 (+)	RGD
Celera	20	7,802,044 - 7,822,922 (+)	RGD

Sequence:

show sequence

GAGACAGCGGCAGCCACTTCCAGGATTGGTGACCCAGAAGGAAATCTCTGACCTCAGTGGTGAC
CAGAAGCCAACTTCATGTCTGAAGGCACAAGCTGCAGTTTGTCATGGAAAGCTTGGGGCTGCAA
ACGGTGACCCTCAGTGATGGGACAACAGCCTACGTCCAGCAGGCCATCAAAGGGGAGAAGCTGC
TTGAAGGGCAAGTGATCCAGCTGGAGGACGGGACCACTGCATACATCCACCAGGTGACGATACA
GAAAGAGTCTTTCTCCTTCGAAGATGGTCAGCCTGTGCAGCTGGAGGACGGGAGCATGGCCTAC
ATACACCACACACCCAAAGAGGGCTATGACCCCAGCGCCCTGGAGGCTGTCCAGCTGGAAGATG
GCTCCACCGCCTACATCCATCACCCTGTGTCTGTGCCGCCGGACAGCACCATCCTGGCTGTGCA
GACAGAGGTGGGATTGGAGGACCTGGCAGCGGAGGAGGAGGAGGGTTTTGGCGCAGACACGGTG
GTAGCCCTGGAGCAATATGCGAGCAAGGTTCTGCACGATAGCCCGGCTTCCCACAATGGCAAAG
GGCAGCAAGTTGGAGACCGAGCTTTCCGCTGTGGCTACAAGGGCTGTGGCCGCCTCTACACCAC
TGCCCATCACTTAAAGGTCCACGAACGCGCTCACACAGGTGACCGTTCATACAGATGTGACTTC
CCCAGCTGTGGAAAGGCCTTCGCAACAGGCTATGGGCTAAAAAGTCACGTTCGTACTCACACGG
GTGAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACCT
GCAGAAACACGTCCGGACCCACACAGGTGAACGCCCGTTCCGGTGCCCCTTTGAGGGCTGTGGC
CGCTCCTTCACCACATCGAACATTCGCAAGGTACATGTGCGCACGCACACAGGCGAGCGGCCCT
ACACCTGCCCCGAGCCCCACTGTGGCCGTGGCTTCACCAGCGCCACCAACTACAAGAATCACGT
GCGCATCCATACAGGGGAGAAGCCATACGTTTGCACGGTGCCTGGCTGCGGAAAGCGCTTCACG
GAGTACTCGAGCCTGTACAAGCACCACGTGGTGCACACGCACTGCAAGCCCTACACCTGCAGTA
GCTGCGGCAAGACCTACCGGCAGACCTCCACCCTGGCCATGCACAAGCGCAGCGCGCACGGCGA
GCTGGAGGCCACGGAGGAGAGCGAGCAGGCCCTGTATGAGCAGCAGCAGCTAGAGGCTGCCTCC
GCCGCCGAGGAAAGCCCCTCACCCAAACCAACCCACATTGCTTACCTTTCGGAAGTGAAAGAAG
AGAGCAGTGACATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGGCCCCCCAGGTGGC
TCTCATCACTCAGGATGGTACCCAGCAGGTCAGCCTGTCCCCAGAAGACCTGCAGGCCCTGGGG
AGTGCCATCAGTGTGGTGACACAGCACAGAAGCACCACCCTTACCATCCCCGGTCATCAGGAAG
AACTGGCCACGTCTGGCACACATACGGTCACCATGGTCAGCGCCGATGGCACACAGACTCAGCC
CGTCACAATCATTACCTCTGGGGCCTTGGTGACCGAGGACTCGAGTGTGGCATCTCTTCACCAC
CAACAGGTGGCACTGTTGGCCACAGCAAACGGAACACACATCGCTGTGCAGCTGGAGGATCAGC
AGACCCTGGAGGAGGTCATAAGCGTAGCCACTTCTGCCATGCAGCAAGGGGCCGTGACCCTGGA
AACCACGGAGAGCGGCTGCTGAGCCCAAGAGGACCGGCTCCCACACCACACTGGAGAGGGCACC
ATGCTCATAGGCAGCCCTGCCAACGGGGCCCCAGCTGTGGCTGACCCCAGGAAGATGGCCGCGT
AGGCCTCTGGGGCGATGAGGCAACAGGGAAATGGCCTCTAGTGGAAAGGGCTGTGGGCTACACC
CAAGGTGAGGGCCGGGCAGCAGGCAGTGGACGTTGAGCTTGGTTACCAGGCTGCCTCAGACACC
TGCTTCCCTCCCTGGGGAGAATGCTCTCCCCACATCTGTCCACTCCCTTTCTCAGGGAGCAGGT
GACTAGGTGGACAAGGACTGGCCTCCACCCTGACTGGTGATACCACCAGGGGAAAGGTTGGCAG
CTTCTCAGCCCAGTGCCTCCCAGCAATAACCATCTCCTGGGAGCAAGGTGGCCAAGATGCCACC
CACCAGGGACTCCCCACCACCACAGTCAGAATTAACTCCTCAGGGGCCTGTGGCTGGCGTAAGG
TGCCTCTTCACTTGTCTGTGGCAGAAAGACAAGAGAGTGGCCCACACCTGGACGGCTGGGGACT
GGGTTTAATTTGTTTTGTGGTTTGGTTTTTTTAATCCTATTTTGATAATTATTTTTTTTCCTGC
TCTGGGTGGCGGTGGCAAACGGGTGAATTGAGTATTTAATAAAACTTGCAAGTTTCCAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008772820 ⟹ XP_008771042

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	6,235,320 - 6,268,258 (+)	NCBI
mRatBN7.2	20	6,234,997 - 6,266,512 (+)	NCBI
Rnor_6.0	20	7,750,786 - 7,786,020 (+)	NCBI

Sequence:

show sequence

CCCCCCCAAAAAAAAAACTAAAGTCAACCAACCAAACAAACAGAAGGGGACCCATTCCTAGCAC
TTCTGACAGCTCTTTCAATGGAACATGGTCTTGGACACCAAAGTTCTGAAACGCAGGATGGGTC
AGCAACTACCACTGTCACCACACTGCCTATGGGCCATGGCAAGCGGTCCCCAACCGTTATACAT
GACAGCCTCAGGTCAGGATAGATGGATGGATAGATAGATAGATAGATAGATAGATAGATAGATA
GATAGATAGATAGATAGATGGATCGCCACCTCTAGTGTGACTTGAGGGACAGGGGAAATGGCTG
CTGAAGCAGTCATTTGGGTTGGCCCAGCAGAATCTTGAGCTTTCTCCTTAACATGTCACGAAGC
TAGGTGGGGCCACGCCACCATCACTGAACTGCTCTTTTGTGCCAAGCAAGGCAGTGCTGCTGTC
TTTGCCTGACGACAGTAGCCGCCACGCTCAGAGTTCACGCGAGTGACTTTGTAATTCTACCTGA
CTGTCCAAACAGATTTCTCAACAAGGGGGAGGATCTGTTCCACTGGTGGCTAGAGGAGTCAGCG
CACTAGCATTCTATCGTATGTGCGCTGACTTCCTGTGAGTGTGACTTGGTGTGGTAGAAGGTTA
CATTTCTAGAACCGAAGGACGAGAGCCAGAGCCAAGGTCGCTGCACCACAGCAGCCGAGAGCCG
TCCTCTGACAGCGTCCTCTCTGACCTTTACTCACTCTCACTCGTAGCGCTCTGCCTAGTGTGCA
CAGGGCCTTGAATCTGGCTCCCGATATCAAAAGAATAAAATCCCACTCCACAACAGCTTCCCTC
CCGGCCAATGCTTCGGACCTGAGATGTCTTAGAACCACTGCTTTGGCTGGGAATAGGGACACCT
TTGATCTGAGCACTTGGGGAGGGTGAGGCAGGCAGATCTGTGAGCTGGAGGCTAGCCTGATCTA
CCTAGACGAAGGTACAGGCCAGCTGAGGCTACTTAGCGAGATGCCAACTTTCATCTCTTACTTA
AGACAAACGCTTTCTGAGTTTTTGTTAAATGTGTGACGAAGAGGAGGACATGGAACGGCAAGTA
CCATCTGCAAAGAAGAGATGCGTGTCCGTGTCATAGAAGTTGGCGGAGCTGAGCAGACATAAAT
ATTCCTTCTGAATCCTACTCTTTTAAACTCACCAGGTAACTGAAAGGGATCCTGAATTTCTTCA
TTGAGTAGGTGAGTGCATTTGTGAGCATGCATGCATGTGCAAGCTGTGTGTGTGTGTCTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACGCTACCTTGTGCCTTTGTGGTTTTGAG
GACGACGGGGGGAGTGGGGGGAGAGGGGGCAGGTTCTCTCTTTCCACCTTGTTTTGTTGGTTCC
AAGGTTTATCAGGCTGGCCTTATAGGCCATCGAGTCTGGCTTTCTTGCCACATTTCTAACCAGT
AATCCAAACTGTGAAACCCTGGAAAGGTCCTGTGTCTGTTGTGCTCAGACAGCAAGGCTGGGGA
TATACTAGGGCACCAGGTAGAAATCCCAGTACCACTCCGAGACCTCAGGATTAACAGGCGCGTG
CCAAGGCTCCTCCCCCTTCATCTACTTATTTCTAGCTGGAAGCTCATTTTCCCTCAAGTTTCTG
AGAATATCATAAATCGCAATTCCTCCCTGCTTGGAGGAGAGATGATAAAAGAACTTTTACAGTT
TGGGTGCCAGGTATGAAGCTGAGGCAAGAGGGATCACAAGTTCAAGTCCACCTTGAGATAGGTA
GTTTGAGTCCGGGGGGAAAAAAGAGAGACAAAACTATGGAAAAACAGAGAAGAAAAGGGGGCAC
TTGATTTTGTTCTTCACACTGCTACCCTAATCAAGGGGAGCAGTTGGTTTGGGGGGTGCTGATG
TTGGAATGAGTGAGCGCCCAAGAACCTGAGAAGACACTCAGGGTGCAGTCCCTCAGGGGTCCGA
CCATCAGAATGTTATTTCTCAGGGAAGGCAATACTGCAAGATTATTCCTCAGCAAGCGCTGAGG
GAACCTTCCTTCAGGGAGGATCATCCCTCTGGGTGACCAGTCCAGCAGAGGGGAGCCTCAGGGC
CCTTCAGGAGACAGGAAGGATGCACCAACCCTCATAAACAGTCACGTTCCCCAGGGCACTGTGC
CCCAGTACATGGGACAAGGCCAGTACTGCAGGGAGGATTGTTCCGCAGGAAGGACTGTCAGGGC
GCCATCCTTCATGACGCTGTCCCTCCCCCACCCCACCTCACCCCTCGGGTATCTTCCCACAAAG
TGCAGGAAGGACTGACCCTCGGAGTGCAGTACTTGCGGAAGGACCATCCCGCCCACAGGGAGGA
CCGTTCCTCTGTCCCTCTGTCCCTCAATCCCCCAGGGTGCTGAGCCCCTTCACCTTCTGTCAGA
GCGCGGAGAGATGAGTCCCTCAGGGCGAAGTCCCAGGGGGAGGACCGTCCAGCAGAGATGGCTG
CCAGGGCGCCATCCCTCGGGACGCCGTTGCACAGAGCGCGGGGAGAACCGTCCCTCGGAGTCCC
ATCCCCTCCAGGCTCCTCTTCACCGTCTGTTGCAGTCACCACCTAGCGATATCTGCAATGGCTT
CCTCCAGAGCAGCCAGCCGCGGAGCGACTCCCCGTTGCTAGGGCGACCGCGGCTTCCACCCGGC
GTCATGACGTCATCACGCCCTCCCCCGGCGCCGGGGCTGGCGAGGCCGCGTCACCCGGCGGCCA
GCAGTGAGAAGAGCGGGGCGGAGCTAGCTCCGAGGCTCGCCCGAGGAGACTCGGCGGCCTGGGC
TCCGGGGCCCGGGAACCGGGATAAGCAGGCCGGCCGCCGCGGCGGAGGGGGGCGGGCTGGAGCG
TGGCCCCGCGCTGGTCATCCGGGTTCCGGGGCCCGGCGGAGGCCGTGCCGGGAGCGAGAGGGAA
GTGCGGCCGCCCTGGAACCTGGATATCGCGCGAGGCAAGCCGCGCGCGGGCGGGCGGGCTATGG
CGCAGGCGGGTTGCGGGGCCGGCGCTGGTGGCAGGGCCCGGTGCATGGCGGTCTGTCGGCGGAG
TCGCCCTCGGGGGCTGTCAGATTGGTGACCCAGAAGGAAATCTCTGACCTCAGTGGTGACCAGA
AGCCAACTTCATGTCTGAAGGCACAAGCTGCAGTTTGTCATGGAAAGCTTGGGGCTGCAAACGG
TGACCCTCAGTGATGGGACAACAGCCTACGTCCAGCAGGCCATCAAAGGGGAGAAGCTGCTTGA
AGGGCAAGTGATCCAGCTGGAGGACGGGACCACTGCATACATCCACCAGGTGACGATACAGAAA
GAGTCTTTCTCCTTCGAAGATGGTCAGCCTGTGCAGCTGGAGGACGGGAGCATGGCCTACATAC
ACCACACACCCAAAGAGGGCTATGACCCCAGCGCCCTGGAGGCTGTCCAGCTGGAAGATGGCTC
CACCGCCTACATCCATCACCCTGTGTCTGTGCCGCCGGACAGCACCATCCTGGCTGTGCAGACA
GAGGTGGGATTGGAGGACCTGGCAGCGGAGGAGGAGGAGGGCTTTGGCGCAGACACGGTGGTAG
CCCTGGAGCAATATGCGAGCAAGGTTCTGCACGATAGCCCGGCTTCCCACAATGGCAAAGGGCA
GCAAGTTGGAGACCGAGCTTTCCGCTGTGGCTACAAGGGCTGTGGCCGCCTCTACACCACTGCC
CATCACTTAAAGGTCCACGAACGCGCTCACACAGGTGACCGTCCATACAGATGTGACTTCCCCA
GCTGTGGAAAGGCCTTCGCAACAGGCTATGGGCTAAAAAGTCACGTTCGTACTCACACGGGTGA
GAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCAAAGCCTTCAAGACCTCAGGGGACCTGCAG
AAACACGTCCGGACCCACACAGGTGAACGCCCGTTCCGGTGCCCCTTTGAGGGCTGTGGCCGCT
CCTTCACCACATCGAACATTCGCAAGGTACATGTGCGCACGCACACAGGCGAGCGGCCCTACAC
CTGCCCCGAGCCCCACTGTGGCCGTGGCTTCACCAGCGCCACCAACTACAAGAATCACGTGCGC
ATCCATACAGGGGAGAAGCCATACGTTTGCACGGTGCCTGGCTGCGGAAAGCGCTTCACGGAGT
ACTCGAGCCTGTACAAGCACCACGTGGTGCACACGCACTGCAAGCCCTACACCTGCAGTAGCTG
CGGCAAGACCTACCGGCAGACCTCCACCCTGGCCATGCACAAGCGCAGCGCGCACGGCGAGCTG
GAGGCCACGGAGGAGAGCGAGCAGGCCCTGTATGAGCAGCAGCAGCTAGAGGCTGCCTGCGCCG
CCGAGGAAAGCCCCTCACCCAAACCAACCCACATTGCTTACCTTTCGGAAGTGAAAGAAGAGAG
CAGTGACATCCCAACCCAAGTAGCCATGGTGACGGAGGAGGATGGGGCCCCCCAGGTGGCTCTC
ATCACTCAGGATGGTACCCAGCAGGTCAGCCTGTCCCCAGAAGACCTGCAGGCCCTGGGGAGTG
CCATCAGTGTGGTGACACAGCACAGAAGCACCACCCTTACCATCCCCGGTCATCAGGAAGAACT
GGCCACGTCTGGCACACATACGGTCACCATGGTCAGCGCCGATGGCACACAGACTCAGCCCGTC
ACAATCATTACCTCTGGGGCCTTGGTGACCGAGGACTCGAGTGTGGCATCTCTTCACCACCAAC
AGGTGGCACTGTTGGCCACAGCAAACGGAACACACATCGCTGTGCAGCTGGAGGATCAGCAGAC
CCTGGAGGAGGTCATAAGCGTAGCCACTTCTGCCATGCAGCAAGGGGCCGTGACCCTGGAAACC
ACGGAGAGCGGCTGCTGAGCCCAAGAGGACCGGCTCCCACACCACACTGGAGAGGGCACCATGC
TCATAGGCAGCCCTGCCAACGGGGCCCCAGCTGTGGCTGACCCCAGGAAGATGGCCGCGTAGGC
CTCTGGGGCGATGAGGCAACAGGGAAATGGCCTCTAGTGGAAAGGGCTGTGGGCTACACCCAAG
GTGAGGGCCGGGCAGCAGGCAGTGGACGTTGAGCTTGGTTACCAGGCTGCCTCAGACACCTGCT
TCCCTCCCTGGGGAGAATGCTCTCCCCACATCTGTCCACTCCCTTTCTCAGGGAGCAGGTGACT
AGGTGGACAAGGACTGGCCTCCACCCTGACTGGTGATACCACCAGGGGAAAGGTTGGCAGCTTC
TCAGCCCAGTGCCTCCCAGCAATAACCATCTCCTGGGAGCAAGGTGGCCAAGATGCCACCCACC
AGGGACTCCCCACCACCACAGTCAGAATTAACTCCTCAGGGGCCTGTGGCTGGCGTAAGGTGCC
TCTTCACTTGTCTGTGGCAGAAAGACAAGAGAGTGGCCCACACCTGGACGGCTGGGGACTGGGT
TTAATTTGTTTTGTGGTTTGGTTTTTTTAATCCTATTTTGATAATTATTTTTTTTCCTGCTCTG
GGTGGCGGTGGCAAACGGGTGAATTGAGTATTTAATAAAACTTGCAAGTTTCCA

hide sequence

RefSeq Acc Id:

XM_039098817 ⟹ XP_038954745

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	6,235,320 - 6,268,258 (+)	NCBI
mRatBN7.2	20	6,234,884 - 6,266,512 (+)	NCBI

RefSeq Acc Id:

XM_039098818 ⟹ XP_038954746

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	6,235,320 - 6,262,177 (+)	NCBI
mRatBN7.2	20	6,234,997 - 6,260,325 (+)	NCBI

RefSeq Acc Id:

XM_063279220 ⟹ XP_063135290

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	6,234,951 - 6,268,258 (+)	NCBI

RefSeq Acc Id:

XM_063279221 ⟹ XP_063135291

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	6,260,970 - 6,268,258 (+)	NCBI

RefSeq Acc Id:

XM_063279222 ⟹ XP_063135292

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	6,235,320 - 6,261,994 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001128227	(Get FASTA)	NCBI Sequence Viewer
	NP_001421562	(Get FASTA)	NCBI Sequence Viewer
	NP_001421563	(Get FASTA)	NCBI Sequence Viewer
	XP_008771042	(Get FASTA)	NCBI Sequence Viewer
	XP_038954745	(Get FASTA)	NCBI Sequence Viewer
	XP_038954746	(Get FASTA)	NCBI Sequence Viewer
	XP_063135290	(Get FASTA)	NCBI Sequence Viewer
	XP_063135291	(Get FASTA)	NCBI Sequence Viewer
	XP_063135292	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI68249	(Get FASTA)	NCBI Sequence Viewer
	B4F7E9	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000000595

RefSeq Acc Id:

NP_001128227 ⟸ NM_001134755

- UniProtKB:

B4F7E9 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MESLGLQTVTLSDGTTAYVQQAIKGEKLLEGQVIQLEDGTTAYIHQVTIQKESFSFEDGQPVQL
EDGSMAYIHHTPKEGYDPSALEAVQLEDGSTAYIHHPVSVPPDSTILAVQTEVGLEDLAAEEEE
GFGADTVVALEQYASKVLHDSPASHNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGD
RSYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFR
CPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVP
GCGKRFTEYSSLYKHHVVHTHCKPYTCSSCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQ
QQLEAASAAEESPSPKPTHIAYLSEVKEESSDIPTQVAMVTEEDGAPQVALITQDGTQQVSLSP
EDLQALGSAISVVTQHRSTTLTIPGHQEELATSGTHTVTMVSADGTQTQPVTIITSGALVTEDS
SVASLHHQQVALLATANGTHIAVQLEDQQTLEEVISVATSAMQQGAVTLETTESGC

hide sequence

RefSeq Acc Id:

XP_008771042 ⟸ XM_008772820

- Peptide Label:

isoform X1

- Sequence:

show sequence

MESLGLQTVTLSDGTTAYVQQAIKGEKLLEGQVIQLEDGTTAYIHQVTIQKESFSFEDGQPVQL
EDGSMAYIHHTPKEGYDPSALEAVQLEDGSTAYIHHPVSVPPDSTILAVQTEVGLEDLAAEEEE
GFGADTVVALEQYASKVLHDSPASHNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGD
RPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFR
CPFEGCGRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVP
GCGKRFTEYSSLYKHHVVHTHCKPYTCSSCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQ
QQLEAACAAEESPSPKPTHIAYLSEVKEESSDIPTQVAMVTEEDGAPQVALITQDGTQQVSLSP
EDLQALGSAISVVTQHRSTTLTIPGHQEELATSGTHTVTMVSADGTQTQPVTIITSGALVTEDS
SVASLHHQQVALLATANGTHIAVQLEDQQTLEEVISVATSAMQQGAVTLETTESGC

hide sequence

Ensembl Acc Id:

ENSRNOP00000074943 ⟸ ENSRNOT00000084771

Ensembl Acc Id:

ENSRNOP00000000595 ⟸ ENSRNOT00000000595

RefSeq Acc Id:	XP_038954745 ⟸ XM_039098817
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038954746 ⟸ XM_039098818
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063135290 ⟸ XM_063279220
- Peptide Label:	isoform X1
- UniProtKB:	B4F7E9 (UniProtKB/Swiss-Prot)

RefSeq Acc Id:	XP_063135292 ⟸ XM_063279222
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_063135291 ⟸ XM_063279221
- Peptide Label:	isoform X2

Protein Domains

C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B4F7E9-F1-model_v2	AlphaFold	B4F7E9	1-568	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306239	AgrOrtholog
BioCyc Gene	G2FUF-4431	BioCyc
Ensembl Genes	ENSRNOG00000000501	Ensembl, ENTREZGENE
Ensembl Transcript	ENSRNOT00000000595	ENTREZGENE
Gene3D-CATH	Classic Zinc Finger	UniProtKB/Swiss-Prot
InterPro	Znf_C2H2_sf	UniProtKB/Swiss-Prot
	Znf_C2H2_type	UniProtKB/Swiss-Prot
KEGG Report	rno:361809	UniProtKB/Swiss-Prot
NCBI Gene	361809	ENTREZGENE
PANTHER	KRUEPPEL-LIKE TRANSCRIPTION FACTOR	UniProtKB/Swiss-Prot
Pfam	zf-C2H2	UniProtKB/Swiss-Prot
PhenoGen	Zfp523	PhenoGen
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/Swiss-Prot
	ZINC_FINGER_C2H2_2	UniProtKB/Swiss-Prot
RatGTEx	ENSRNOG00000000501	RatGTEx
SMART	ZnF_C2H2	UniProtKB/Swiss-Prot
Superfamily-SCOP	SSF57667	UniProtKB/Swiss-Prot
UniProt	A0A0G2K9C3_RAT	UniProtKB/TrEMBL
	B4F7E9	ENTREZGENE
	F1LNL6_RAT	UniProtKB/TrEMBL
	ZNF76_RAT	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-07-19	Zfp523	zinc finger protein 523	Znf76	zinc finger protein 76 (expressed in testis)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-09-25	Znf76	zinc finger protein 76 (expressed in testis)	Zfp523	zinc finger protein 523	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	Zfp523	zinc finger protein 523	Zfp523_predicted	zinc finger protein 523 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Zfp523_predicted	zinc finger protein 523 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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