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Gene: Arhgap1 (Rho GTPase activating protein 1) Rattus norvegicus

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Symbol:

Arhgap1

Name:

Rho GTPase activating protein 1

RGD ID:

1306068

Description:

Predicted to enable GTPase activator activity and small GTPase binding activity. Predicted to be involved in several processes, including negative regulation of endocytic recycling; small GTPase-mediated signal transduction; and transferrin transport. Located in perinuclear region of cytoplasm. Orthologous to human ARHGAP1 (Rho GTPase activating protein 1); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; 2,4-dinitrotoluene; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC311193; rho GTPase-activating protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ARHGAP1 (Rho GTPase activating protein 1)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, Panther
Mus musculus (house mouse):	Arhgap1 (Rho GTPase activating protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Arhgap1 (Rho GTPase activating protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ARHGAP1 (Rho GTPase activating protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ARHGAP1 (Rho GTPase activating protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Arhgap1 (Rho GTPase activating protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ARHGAP1 (Rho GTPase activating protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ARHGAP1 (Rho GTPase activating protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Arhgap1 (Rho GTPase activating protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Arhgap1 (Rho GTPase activating protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PCDHB4 (protocadherin beta 4)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	ARHGAP1 (Rho GTPase activating protein 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Arhgap1 (Rho GTPase activating protein 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	arhgap1 (Rho GTPase activating protein 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	ECM25	Alliance	DIOPT (InParanoid\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	ECM25	Alliance	DIOPT (OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	RhoGAP68F	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	RhoGAP68F	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rga-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	arhgap1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	arhgap1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	98,077,064 - 98,099,163 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	98,077,150 - 98,099,154 (+)	Ensembl				GRCr8
mRatBN7.2	3	77,621,377 - 77,643,400 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	77,620,655 - 77,643,396 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	81,096,877 - 81,118,411 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	89,695,902 - 89,717,436 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	87,547,185 - 87,568,702 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	80,555,196 - 80,576,881 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	80,555,196 - 80,576,856 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	76,030,806 - 76,052,736 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	76,826,841 - 76,847,615 (+)	NCBI		Celera
RGSC_v3.1	3	75,931,036 - 75,947,686 (+)	NCBI
Cytogenetic Map	3	q24	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Premature Aging (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(Z)-3-butylidenephthalide (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-hydroxy-17-methylestra-4,9,11-trien-3-one (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (EXP)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

2,6-dimethoxyphenol (ISO)

2-amino-14,16-dimethyloctadecan-3-ol (ISO)

2-methylcholine (ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

aconitine (EXP)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

bortezomib (ISO)

butanal (ISO)

cadmium atom (ISO)

cadmium dichloride (EXP,ISO)

caffeine (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

cobalt dichloride (ISO)

cocaine (EXP)

copper(II) sulfate (ISO)

coumarin (ISO)

crocidolite asbestos (ISO)

D-mannitol (ISO)

dextran sulfate (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

diethylstilbestrol (ISO)

doxorubicin (ISO)

epoxiconazole (ISO)

ethanol (ISO)

FR900359 (ISO)

furfural (ISO)

glafenine (EXP)

ivermectin (ISO)

lead(0) (ISO)

methapyrilene (EXP)

methimazole (EXP)

methotrexate (ISO)

Muconic dialdehyde (ISO)

nickel atom (ISO)

ochratoxin A (ISO)

paracetamol (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

rotenone (EXP)

SB 431542 (ISO)

sodium arsenite (ISO)

sodium chloride (ISO)

sulfadimethoxine (EXP)

tetrachloromethane (ISO)

tetrahydropalmatine (ISO)

titanium dioxide (ISO)

toluene (EXP)

trichloroethene (EXP)

triphenyl phosphate (ISO)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

biological_process (ND)

endosomal transport (IEA,ISO)

negative regulation of endocytic recycling (IBA,IEA,ISO)

signal transduction (IEA)

small GTPase-mediated signal transduction (IBA,ISO)

transferrin transport (IEA,ISO)

Cellular Component

cell leading edge (ISO)

cytoplasm (IBA,IEA,ISO)

cytosol (IEA,ISO)

endosome membrane (IEA,ISO)

membrane (IEA)

perinuclear region of cytoplasm (IDA,IEA,ISO)

plasma membrane (ISO)

plasma membrane bounded cell projection (IEA)

ruffle (ISO)

sorting endosome (IEA,ISO)

Molecular Function

GTPase activator activity (IBA,IEA,ISO)

protein binding (ISO)

small GTPase binding (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	IGFBP-5(201-218) stimulates Cdc42GAP aggregation and filopodia formationin migrating mesangial cells.	Berfield AK, etal., Kidney Int. 2000 May;57(5):1991-2003.
2.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Comprehensive gene review and curation	RGD comprehensive gene curation
7.	Cdc42 GTPase-activating protein deficiency promotes genomic instability and premature aging-like phenotypes.	Wang L, etal., Proc Natl Acad Sci U S A. 2007 Jan 23;104(4):1248-53. Epub 2007 Jan 16.

Additional References at PubMed

PMID:8253717	PMID:8288572	PMID:8889548	PMID:10699171	PMID:15860730	PMID:16380373	PMID:18331715	PMID:19056867	PMID:23376485	PMID:23533145	PMID:25468996	PMID:31664016

Genomics

Comparative Map Data

Arhgap1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	98,077,064 - 98,099,163 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	3	98,077,150 - 98,099,154 (+)	Ensembl				GRCr8
mRatBN7.2	3	77,621,377 - 77,643,400 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	77,620,655 - 77,643,396 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	3	81,096,877 - 81,118,411 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	89,695,902 - 89,717,436 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	87,547,185 - 87,568,702 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	80,555,196 - 80,576,881 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	80,555,196 - 80,576,856 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	3	76,030,806 - 76,052,736 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	3	76,826,841 - 76,847,615 (+)	NCBI		Celera
RGSC_v3.1	3	75,931,036 - 75,947,686 (+)	NCBI
Cytogenetic Map	3	q24	NCBI

ARHGAP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	46,677,080 - 46,700,619 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	46,677,075 - 46,700,977 (-)	Ensembl			hg38	GRCh38
GRCh37	11	46,698,630 - 46,722,169 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	46,655,206 - 46,678,696 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	11	46,655,209 - 46,678,696	NCBI
Celera	11	46,846,844 - 46,870,551 (-)	NCBI		Celera
Cytogenetic Map	11	p11.2	NCBI
HuRef	11	46,404,665 - 46,428,254 (-)	NCBI		HuRef
CHM1_1	11	46,697,036 - 46,720,625 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	46,833,096 - 46,856,635 (-)	NCBI		T2T-CHM13v2.0

Arhgap1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	91,480,463 - 91,502,670 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	91,480,205 - 91,502,671 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	2	91,650,118 - 91,672,325 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	91,649,860 - 91,672,326 (+)	Ensembl			mm10	GRCm38
MGSCv37	2	91,490,275 - 91,512,482 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	2	91,454,047 - 91,473,157 (+)	NCBI		MGSCv36	mm8
Celera	2	93,039,665 - 93,061,789 (+)	NCBI		Celera
Cytogenetic Map	2	E1	NCBI
cM Map	2	50.63	NCBI

Arhgap1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	1,378,426 - 1,396,899 (+)	Ensembl
ChiLan1.0	NW_004955422	1,378,426 - 1,395,439 (+)	NCBI	ChiLan1.0	ChiLan1.0

ARHGAP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	48,880,858 - 48,905,978 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	48,900,620 - 48,925,755 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	46,626,174 - 46,651,308 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	47,185,415 - 47,209,813 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	47,185,415 - 47,209,765 (-)	Ensembl			panPan2	panpan1.1

ARHGAP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	42,813,580 - 42,832,054 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	42,813,693 - 42,830,458 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	41,545,991 - 41,559,181 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	43,469,679 - 43,488,158 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	43,469,753 - 43,488,150 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	42,958,392 - 42,971,585 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	42,514,027 - 42,527,216 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	43,243,313 - 43,256,512 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Arhgap1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	20,289,302 - 20,308,993 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936562	2,400,422 - 2,420,766 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936562	2,400,983 - 2,420,635 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARHGAP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	15,834,703 - 15,854,179 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	15,834,285 - 15,854,181 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	17,185,458 - 17,205,207 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ARHGAP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	18,627,534 - 18,648,984 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	18,627,611 - 18,650,706 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666038	115,911,102 - 115,933,286 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Arhgap1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	1,905,283 - 1,922,263 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624767	1,905,217 - 1,922,263 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Arhgap1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	5	65,795,449 - 65,816,961 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Arhgap1
150 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	550
Count of miRNA genes:	235
Interacting mature miRNAs:	290
Transcripts:	ENSRNOT00000067318
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300178	Hrtrt4	Heart rate QTL 4	3.74		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	51490129	111359995	Rat
61377	Edpm3	Estrogen-dependent pituitary mass QTL 3	7.05	0.038	pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	73592611	110333156	Rat
1358293	Bw38	Body weight QTL 38	6	0.0000031	body mass (VT:0001259)	body weight (CMO:0000012)	3	74364268	119364268	Rat
2301414	Kidm37	Kidney mass QTL 37		0.001	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	3	96509147	141509147	Rat
1582238	Bw68	Body weight QTL 68	3.2	0.0064	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582239	Epfw1	Epididymal fat weight QTL 1	4.5	0.0006	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	3	73592512	136118980	Rat
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	51581665	184004958	Rat
1354589	Bw31	Body weight QTL 31	3.3		body mass (VT:0001259)	body weight (CMO:0000012)	3	53651826	98651826	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	67641776	167835660	Rat
1358362	Srcrt2	Stress Responsive Cort QTL 2	2.78		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	3	58601291	153936591	Rat
737818	Hcar12	Hepatocarcinoma resistance QTL 12	2.6		liver integrity trait (VT:0010547)	volume of individual liver tumorous lesion (CMO:0001078)	3	49872657	138829559	Rat
1582218	Bw74	Body weight QTL 74	3.9	0.0021	body mass (VT:0001259)	body weight (CMO:0000012)	3	73592512	136118980	Rat
1582221	Kidm30	Kidney mass QTL 30	3.5	0.0008	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	3	85062224	136118980	Rat
1582210	Bw71	Body weight QTL 71	3.3	0.0012	body mass (VT:0001259)	body weight (CMO:0000012)	3	85062224	136118980	Rat
1300111	Rf12	Renal function QTL 12	3.78		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	81425008	141509147	Rat
724523	Tsu1	Thymus enlargement suppressive QTL 1	3.84		thymus mass (VT:0004954)	thymus weight to body weight ratio (CMO:0000612)	3	70845569	136091483	Rat
1600376	Arunc5	Aerobic running capacity QTL 5		0.21	exercise endurance trait (VT:0002332)	longest distance run on treadmill (CMO:0001406)	3	93829559	138829559	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	79649560	177741895	Rat
2292613	Ept16	Estrogen-induced pituitary tumorigenesis QTL 16	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat
1581503	Cm58	Cardiac mass QTL 58	2.7	0.05	heart left ventricle mass (VT:0007031)	heart left ventricle weight to body weight ratio (CMO:0000530)	3	96509147	141509147	Rat
738019	Anxrr10	Anxiety related response QTL 10	3.9		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	3	58925062	103925062	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	70311536	115311536	Rat
631200	Cm25	Cardiac mass QTL 25	4.8	0.0001	heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	3	81541464	126563126	Rat
12879848	Bw181	Body weght QTL 181		0.015	body mass (VT:0001259)	body weight (CMO:0000012)	3	90755164	141509147	Rat
1358905	Hrtrt17	Heart rate QTL 17	5.9	0.000014	heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	3	36721849	110333156	Rat
1358885	Bp251	Blood pressure QTL 251	3.8		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	1	141509147	Rat
1354597	Kidm13	Kidney mass QTL 13	2.9		kidney mass (VT:0002707)	right kidney wet weight (CMO:0000082)	3	42158111	124558371	Rat
1354604	Bw36	Body weight QTL 36	2.9		body mass (VT:0001259)	body weight (CMO:0000012)	3	42158111	124558371	Rat
1358888	Bp264	Blood pressure QTL 264	4.43		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	3	5675975	141509147	Rat
1358186	Ept2	Estrogen-induced pituitary tumorigenesis QTL 2	8.3		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	3	67641995	130815812	Rat

Markers in Region

RH127727

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	77,643,044 - 77,643,235 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	80,576,526 - 80,576,716	NCBI	Rnor6.0
Rnor_5.0	3	87,275,626 - 87,275,816	UniSTS	Rnor5.0
RGSC_v3.4	3	76,052,381 - 76,052,571	UniSTS	RGSC3.4
Celera	3	76,847,260 - 76,847,450	UniSTS
Cytogenetic Map	3	q24	UniSTS

RH142167

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	77,642,779 - 77,642,964 (+)	MAPPER	mRatBN7.2
Rnor_6.0	3	80,576,261 - 80,576,445	NCBI	Rnor6.0
Rnor_5.0	3	87,275,361 - 87,275,545	UniSTS	Rnor5.0
RGSC_v3.4	3	76,052,116 - 76,052,300	UniSTS	RGSC3.4
Celera	3	76,846,995 - 76,847,179	UniSTS
Cytogenetic Map	3	q24	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001107747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234559	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006234560	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039104901	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AA900696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CK480577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CO573331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DN932805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DV725096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EV768858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ224002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000067318 ⟹ ENSRNOP00000059324

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	98,077,468 - 98,099,154 (+)	Ensembl
mRatBN7.2 Ensembl	3	77,621,716 - 77,643,396 (+)	Ensembl
Rnor_6.0 Ensembl	3	80,555,196 - 80,576,856 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000079118 ⟹ ENSRNOP00000070761

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	98,077,150 - 98,099,154 (+)	Ensembl
mRatBN7.2 Ensembl	3	77,620,655 - 77,643,394 (+)	Ensembl
Rnor_6.0 Ensembl	3	80,556,668 - 80,575,657 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000098688 ⟹ ENSRNOP00000087093

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	3	98,077,468 - 98,099,154 (+)	Ensembl
mRatBN7.2 Ensembl	3	77,621,746 - 77,643,235 (+)	Ensembl

RefSeq Acc Id:

NM_001107747 ⟹ NP_001101217

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,449 - 98,099,163 (+)	NCBI
mRatBN7.2	3	77,621,689 - 77,643,400 (+)	NCBI
Rnor_6.0	3	80,555,196 - 80,576,881 (+)	NCBI
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI
RGSC_v3.4	3	76,030,806 - 76,052,736 (+)	RGD
Celera	3	76,826,841 - 76,847,615 (+)	RGD

Sequence:

show sequence

AAGTGGTTGGGAGCTAAGGGCCCCCGAGGGGGCGGTTCCCATTCCCACCTCGGAGCCGGATGTT
TGCCGAGCTTTGACAGGCGTGGCAAAGGGAGCATTACCCGAACGCGGCTTCTCTTCTGGTTCTC
CTTAGCCATGGATCCTCTCTCAGAACTGCAAGATGACCTGACCCTGGATGATACCAGCCAAGCC
CTGAACCAGTTGAAGCTGGCCTCTATTGATGAGAAGAACTGGCCTTCTGATGAAATGCCAGACT
TTCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGAACCTGTCACACACCTGAAGTGGGATGA
CCCTTACTACGACATTGCCAGGCACCAGATTGTGGAAGTGGCAGGTGATGATAAGTACGGGCGG
AAGATAATTGTATTTAGTGCTTGCCGGATGCCCCCCAGCCACCAGCTGGACCACAGCAAGCTCT
TGGGGTACTTGAAACACACACTGGACCAGTATGTGGAAAGTGACTACACACTCCTGTACCTGCA
CCATGGCCTGACCAGTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATGCCTACCGAGAGTTT
GACCGCAAGTACAAGAAGAACATCAAGGCTCTGTACATTGTGCACCCAACCATGTTCATCAAAA
CTCTGCTTATCCTCTTTAAGCCCCTCATCAGTTTCAAGTTTGGACGGAAGATCTTCTATGTGAA
TTACCTGAGTGAGTTAAGCGAGCACGTGAAGCTGGAGCAGTTGGGGATCCCTCGCCAAGTGCTC
AAGTATGATGACTTCCTCAAGTCCACCCAGAAGAGCCCTGCAACAGCTCCCAAGCCCATGCCAC
CACGGCCCCCCCTGCCTAATCAGCAATTTGGGGTCTCGTTACAGCACCTCCGGGAGAAAAACCC
GAACCAGGAGCCCATCCCCATTGTGCTCAGGGAGACAGTCGCCTACTTGCAGGCGCACGCTCTC
ACCGCCGAGGGCATCTTCCGGAGGTCTGCCAACACCCAGGTAGTAAGAGAAGTGCAGCAGAAAT
ACAATATGGGGCTGCCAGTGGACTTTGACCAGTACAATGAGCTGCACCTGCCAGCCGTCATACT
CAAGACATTCCTTCGGGAGCTTCCTGAACCCTTGCTAACCTTTGACCTCTACCCCCACATTGTG
GGCTTCCTCGATCTTGATGACGACCAGAGAGTGGAGGTAACACAGCAGGTTCTCCAAACTCTGC
CAGAGGAGAACTACCGGGTACTTCACTTCCTGACTGCCTTCCTTGTACAGGTATCTGCCCACTC
TTACCAGAACAGGATGAATAACACTAACCTGGCTGTGGTCTTCGGCCCTAACCTGCTGTGGGCT
AAGGATGCTGCCATCACCCTCAAGGCCATTAATCCCATCAACACCTTCACTAAATTCCTCCTGG
ATCATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGGGGGTCTGAGCTCAGCCCCCACCTCC
AGCCCCTTCTCTGGCAGCTCCAGTTGGACTTGTCCTCCTGGTATCAACCTTATTGGAGCTTCTG
CCTAGGAAGGGACCCTGAAGCCCCTCCCAGGAGATGTAGGTTGGAGCCCACTAACTGGGCAGCC
CCTCCTCTCCCTCTGTCCATCCCACCTTACCGGCCCTGGAGGCCTGTTACCCTAAGACATTTTC
TTTGCCTTACACTTCTCACTGCCTCTTTGGTTGCTGGGCTTGACTCTTCCAGGATTCAGCCCAA
GTAATCCTTTTCTTTTTTTCCTGCCTGTTTCCCTGGCAACTGTAGAAGACTACATCACTGCCAG
CTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTGCCTGTTAGGAAGTGAGTGTTGACCTGGGTGCA
AGTTCCCCGTGCCTGCCCTCCCTACTAGTAGGGATGACCAGAGTTGGCCTGTCACTTCTGCCTC
CAGGGTCTGTTCCTCCCCAAGTGGTACTGCCCCCAGAGTGTCCTGTCCCCTCATTTCTGCCACA
CTTGGCACCTTGGATATCTATCAAGACTCAGAATCTGAGTCCCTATTGAAATGGTCTTGTCCAC
TCCCAGGGAGAGCCATAGTGTCTGGTGGGATCAGTTCCAGCAGTCCTGGCCCTCCATGCCTTCC
CTTCATTCTCACGTGCACAGACCTTCAGCCAAAGGCTGCACAGTAGATCTTTCTGGTGTGGAGT
CACTCTAATCCCTGTTCTGGCCAGGGATTCTAATGCCTCAGGATCCATGGTAGCTCTCACCTCT
TGCCTGGGGACTCTTGGAGAGTCAGGAGCTCAGAAGCCCCTAAGATTGTCAGATGTTTTACTAA
TAGATCACCCCTGCTAGATAGGTTCTAGCAATTCCCTTAGGGGAGTGTGGTGGCCATAGGCCCT
CTTGACTTTCAGAAAGCCTGAACCCCAGTGATTGGTAACTTTCACTCTATTCCTAGTGAAGCCT
TGTGACCCTCTTCCTGAAGTCTGTCCCCTAATGACAGGGAGCTAGCTGCAGTGGCCCTGCCCTA
CAGGTGTGGCCAGGCACACCAGCTGGAGAGGCGGTACTGGGTACTGTAGGATCTGCACTGATGA
CCTTGCAGAGGAGGCTCTTTGCTGCACCACTGTTGTGTCAGGTGCTTCAAGTGCTGCTGTCAGT
CCCCAGCCTTATACCTGCCCAGCCTGGGCCTTTGCTTCTGTCCACTCTGGTGTCGAGTGTCGCT
ACACTCCACTTACTGAGGGCCATCCGGACCTCTTTTGTCTTTCTCTTGCCCCTGCCCTGTCAGT
CTGTGGCTGGGGGTGCTTTTACTGTGAATCCAGTGTTCACATTTACCACAATTTCCTTGGCACC
AATCATGTATTTTACCGTTTGCACTTTTTGTATTTCAATAAAAATGTAAATGAAAAATGCCAAA
AAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006234551 ⟹ XP_006234613

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,461 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,621,663 - 77,643,398 (+)	NCBI
Rnor_6.0	3	80,555,200 - 80,576,881 (+)	NCBI
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI

Sequence:

show sequence

GGTTGGGAGCTAAGGGCCCCCGAGGGGGCGGTTCCCATTCCCACCTCGGAGCCGGATGTTTGCC
GAGCTTTGACAGGCGTGGCAAAGGGAGCATTACCCGAACGCGGCTTCATCCACCCTCTGACTAG
CAGATAAACATCTGGGCTCAGAAGGCAACAGAAGCAGGCTTCTCTTCTGGTTCTCCTTAGCCAT
GGATCCTCTCTCAGAACTGCAAGATGACCTGACCCTGGATGATACCAGCCAAGCCCTGAACCAG
TTGAAGCTGGCCTCTATTGATGAGAAGAACTGGCCTTCTGATGAAATGCCAGACTTTCCCAAGT
CAGATGACTCCAAAAGCAGCTCTCCAGAACCTGTCACACACCTGAAGTGGGATGACCCTTACTA
CGACATTGCCAGGCACCAGATTGTGGAAGTGGCAGGTGATGATAAGTACGGGCGGAAGATAATT
GTATTTAGTGCTTGCCGGATGCCCCCCAGCCACCAGCTGGACCACAGCAAGCTCTTGGGGTACT
TGAAACACACACTGGACCAGTATGTGGAAAGTGACTACACACTCCTGTACCTGCACCATGGCCT
GACCAGTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATGCCTACCGAGAGTTTGACCGCAAG
TACAAGAAGAACATCAAGGCTCTGTACATTGTGCACCCAACCATGTTCATCAAAACTCTGCTTA
TCCTCTTTAAGCCCCTCATCAGTTTCAAGTTTGGACGGAAGATCTTCTATGTGAATTACCTGAG
TGAGTTAAGCGAGCACGTGAAGCTGGAGCAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGAT
GACTTCCTCAAGTCCACCCAGAAGAGCCCTGCAACAGCTCCCAAGCCCATGCCACCACGGCCCC
CCCTGCCTAATCAGCAATTTGGGGTCTCGTTACAGCACCTCCGGGAGAAAAACCCGAACCAGGA
GCCCATCCCCATTGTGCTCAGGGAGACAGTCGCCTACTTGCAGGCGCACGCTCTCACCGCCGAG
GGCATCTTCCGGAGGTCTGCCAACACCCAGGTAGTAAGAGAAGTGCAGCAGAAATACAATATGG
GGCTGCCAGTGGACTTTGACCAGTACAATGAGCTGCACCTGCCAGCCGTCATACTCAAGACATT
CCTTCGGGAGCTTCCTGAACCCTTGCTAACCTTTGACCTCTACCCCCACATTGTGGGCTTCCTC
GATCTTGATGACGACCAGAGAGTGGAGGTAACACAGCAGGTTCTCCAAACTCTGCCAGAGGAGA
ACTACCGGGTACTTCACTTCCTGACTGCCTTCCTTGTACAGGTATCTGCCCACTCTTACCAGAA
CAGGATGAATAACACTAACCTGGCTGTGGTCTTCGGCCCTAACCTGCTGTGGGCTAAGGATGCT
GCCATCACCCTCAAGGCCATTAATCCCATCAACACCTTCACTAAATTCCTCCTGGATCATCAAG
GGGAATTGTTCCCCAGCACAGATGCCCAGGGGGTCTGAGCTCAGCCCCCACCTCCAGCCCCTTC
TCTGGCAGCTCCAGTTGGACTTGTCCTCCTGGTATCAACCTTATTGGAGCTTCTGCCTAGGAAG
GGACCCTGAAGCCCCTCCCAGGAGATGTAGGTTGGAGCCCACTAACTGGGCAGCCCCTCCTCTC
CCTCTGTCCATCCCACCTTACCGGCCCTGGAGGCCTGTTACCCTAAGACATTTTCTTTGCCTTA
CACTTCTCACTGCCTCTTTGGTTGCTGGGCTTGACTCTTCCAGGATTCAGCCCAAGTAATCCTT
TTCTTTTTTTCCTGCCTGTTTCCCTGGCAACTGTAGAAGACTACATCACTGCCAGCTGTGCTGG
TAGCTGGGGCTGGTCCTCTCTTGCCTGTTAGGAAGTGAGTGTTGACCTGGGTGCAAGTTCCCCG
TGCCTGCCCTCCCTACTAGTAGGGATGACCAGAGTTGGCCTGTCACTTCTGCCTCCAGGGTCTG
TTCCTCCCCAAGTGGTACTGCCCCCAGAGTGTCCTGTCCCCTCATTTCTGCCACACTTGGCACC
TTGGATATCTATCAAGACTCAGAATCTGAGTCCCTATTGAAATGGTCTTGTCCACTCCCAGGGA
GAGCCATAGTGTCTGGTGGGATCAGTTCCAGCAGTCCTGGCCCTCCATGCCTTCCCTTCATTCT
CACGTGCACAGACCTTCAGCCAAAGGCTGCACAGTAGATCTTTCTGGTGTGGAGTCACTCTAAT
CCCTGTTCTGGCCAGGGATTCTAATGCCTCAGGATCCATGGTAGCTCTCACCTCTTGCCTGGGG
ACTCTTGGAGAGTCAGGAGCTCAGAAGCCCCTAAGATTGTCAGATGTTTTACTAATAGATCACC
CCTGCTAGATAGGTTCTAGCAATTCCCTTAGGGGAGTGTGGTGGCCATAGGCCCTCTTGACTTT
CAGAAAGCCTGAACCCCAGTGATTGGTAACTTTCACTCTATTCCTAGTGAAGCCTTGTGACCCT
CTTCCTGAAGTCTGTCCCCTAATGACAGGGAGCTAGCTGCAGTGGCCCTGCCCTACAGGTGTGG
CCAGGCACACCAGCTGGAGAGGCGGTACTGGGTACTGTAGGATCTGCACTGATGACCTTGCAGA
GGAGGCTCTTTGCTGCACCACTGTTGTGTCAGGTGCTTCAAGTGCTGCTGTCAGTCCCCAGCCT
TATACCTGCCCAGCCTGGGCCTTTGCTTCTGTCCACTCTGGTGTCGAGTGTCGCTACACTCCAC
TTACTGAGGGCCATCCGGACCTCTTTTGTCTTTCTCTTGCCCCTGCCCTGTCAGTCTGTGGCTG
GGGGTGCTTTTACTGTGAATCCAGTGTTCACATTTACCACAATTTCCTTGGCACCAATCATGTA
TTTTACCGTTTGCACTTTTTGTATTTCAATAAAAATGTAAATGAAAAATGCC

hide sequence

RefSeq Acc Id:

XM_006234552 ⟹ XP_006234614

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,504 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,621,726 - 77,643,400 (+)	NCBI
Rnor_6.0	3	80,555,207 - 80,576,881 (+)	NCBI
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI

Sequence:

show sequence

AGCTAAGGGCCCCCGAGGGGGCGGTTCCCATTCCCACCTCGGAGCCGGATGTTTGCCGAGCTTT
GACAGGCGTGGCAAAGGGAGCATTACCCGAACGCGGTGAGCTGCAAAGCGCGGGGTCTCACTGG
GCGTGGTGGCTTCATCCACCCTCTGACTAGCAGATAAACATCTGGGCTCAGAAGGCAACAGAAG
CAGGCTTCTCTTCTGGTTCTCCTTAGCCATGGATCCTCTCTCAGAACTGCAAGATGACCTGACC
CTGGATGATACCAGCCAAGCCCTGAACCAGTTGAAGCTGGCCTCTATTGATGAGAAGAACTGGC
CTTCTGATGAAATGCCAGACTTTCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGAACCTGT
CACACACCTGAAGTGGGATGACCCTTACTACGACATTGCCAGGCACCAGATTGTGGAAGTGGCA
GGTGATGATAAGTACGGGCGGAAGATAATTGTATTTAGTGCTTGCCGGATGCCCCCCAGCCACC
AGCTGGACCACAGCAAGCTCTTGGGGTACTTGAAACACACACTGGACCAGTATGTGGAAAGTGA
CTACACACTCCTGTACCTGCACCATGGCCTGACCAGTGACAACAAGCCCTCCCTCAGCTGGCTA
CGGGATGCCTACCGAGAGTTTGACCGCAAGTACAAGAAGAACATCAAGGCTCTGTACATTGTGC
ACCCAACCATGTTCATCAAAACTCTGCTTATCCTCTTTAAGCCCCTCATCAGTTTCAAGTTTGG
ACGGAAGATCTTCTATGTGAATTACCTGAGTGAGTTAAGCGAGCACGTGAAGCTGGAGCAGTTG
GGGATCCCTCGCCAAGTGCTCAAGTATGATGACTTCCTCAAGTCCACCCAGAAGAGCCCTGCAA
CAGCTCCCAAGCCCATGCCACCACGGCCCCCCCTGCCTAATCAGCAATTTGGGGTCTCGTTACA
GCACCTCCGGGAGAAAAACCCGAACCAGGAGCCCATCCCCATTGTGCTCAGGGAGACAGTCGCC
TACTTGCAGGCGCACGCTCTCACCGCCGAGGGCATCTTCCGGAGGTCTGCCAACACCCAGGTAG
TAAGAGAAGTGCAGCAGAAATACAATATGGGGCTGCCAGTGGACTTTGACCAGTACAATGAGCT
GCACCTGCCAGCCGTCATACTCAAGACATTCCTTCGGGAGCTTCCTGAACCCTTGCTAACCTTT
GACCTCTACCCCCACATTGTGGGCTTCCTCGATCTTGATGACGACCAGAGAGTGGAGGTAACAC
AGCAGGTTCTCCAAACTCTGCCAGAGGAGAACTACCGGGTACTTCACTTCCTGACTGCCTTCCT
TGTACAGGTATCTGCCCACTCTTACCAGAACAGGATGAATAACACTAACCTGGCTGTGGTCTTC
GGCCCTAACCTGCTGTGGGCTAAGGATGCTGCCATCACCCTCAAGGCCATTAATCCCATCAACA
CCTTCACTAAATTCCTCCTGGATCATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGGGGGT
CTGAGCTCAGCCCCCACCTCCAGCCCCTTCTCTGGCAGCTCCAGTTGGACTTGTCCTCCTGGTA
TCAACCTTATTGGAGCTTCTGCCTAGGAAGGGACCCTGAAGCCCCTCCCAGGAGATGTAGGTTG
GAGCCCACTAACTGGGCAGCCCCTCCTCTCCCTCTGTCCATCCCACCTTACCGGCCCTGGAGGC
CTGTTACCCTAAGACATTTTCTTTGCCTTACACTTCTCACTGCCTCTTTGGTTGCTGGGCTTGA
CTCTTCCAGGATTCAGCCCAAGTAATCCTTTTCTTTTTTTCCTGCCTGTTTCCCTGGCAACTGT
AGAAGACTACATCACTGCCAGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTGCCTGTTAGGAA
GTGAGTGTTGACCTGGGTGCAAGTTCCCCGTGCCTGCCCTCCCTACTAGTAGGGATGACCAGAG
TTGGCCTGTCACTTCTGCCTCCAGGGTCTGTTCCTCCCCAAGTGGTACTGCCCCCAGAGTGTCC
TGTCCCCTCATTTCTGCCACACTTGGCACCTTGGATATCTATCAAGACTCAGAATCTGAGTCCC
TATTGAAATGGTCTTGTCCACTCCCAGGGAGAGCCATAGTGTCTGGTGGGATCAGTTCCAGCAG
TCCTGGCCCTCCATGCCTTCCCTTCATTCTCACGTGCACAGACCTTCAGCCAAAGGCTGCACAG
TAGATCTTTCTGGTGTGGAGTCACTCTAATCCCTGTTCTGGCCAGGGATTCTAATGCCTCAGGA
TCCATGGTAGCTCTCACCTCTTGCCTGGGGACTCTTGGAGAGTCAGGAGCTCAGAAGCCCCTAA
GATTGTCAGATGTTTTACTAATAGATCACCCCTGCTAGATAGGTTCTAGCAATTCCCTTAGGGG
AGTGTGGTGGCCATAGGCCCTCTTGACTTTCAGAAAGCCTGAACCCCAGTGATTGGTAACTTTC
ACTCTATTCCTAGTGAAGCCTTGTGACCCTCTTCCTGAAGTCTGTCCCCTAATGACAGGGAGCT
AGCTGCAGTGGCCCTGCCCTACAGGTGTGGCCAGGCACACCAGCTGGAGAGGCGGTACTGGGTA
CTGTAGGATCTGCACTGATGACCTTGCAGAGGAGGCTCTTTGCTGCACCACTGTTGTGTCAGGT
GCTTCAAGTGCTGCTGTCAGTCCCCAGCCTTATACCTGCCCAGCCTGGGCCTTTGCTTCTGTCC
ACTCTGGTGTCGAGTGTCGCTACACTCCACTTACTGAGGGCCATCCGGACCTCTTTTGTCTTTC
TCTTGCCCCTGCCCTGTCAGTCTGTGGCTGGGGGTGCTTTTACTGTGAATCCAGTGTTCACATT
TACCACAATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACTTTTTGTATTTCAATAAAA
ATGTAAATGAAAAATGCC

hide sequence

RefSeq Acc Id:

XM_006234553 ⟹ XP_006234615

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,580 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,623,145 - 77,643,400 (+)	NCBI
Rnor_6.0	3	80,555,208 - 80,576,881 (+)	NCBI
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI

Sequence:

show sequence

GCTAAGGGCCCCCGAGGGGGCGGTTCCCATTCCCACCTCGGAGCCGGATGTTTGCCGAGCTTTG
ACAGGCGTGGCAAAGGGAGCATTACCCGAACGCGAATTTCCTTTCACAGGCTTCATCCACCCTC
TGACTAGCAGATAAACATCTGGGCTCAGAAGGCAACAGAAGCAGGCTTCTCTTCTGGTTCTCCT
TAGCCATGGATCCTCTCTCAGAACTGCAAGATGACCTGACCCTGGATGATACCAGCCAAGCCCT
GAACCAGTTGAAGCTGGCCTCTATTGATGAGAAGAACTGGCCTTCTGATGAAATGCCAGACTTT
CCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGAACCTGTCACACACCTGAAGTGGGATGACC
CTTACTACGACATTGCCAGGCACCAGATTGTGGAAGTGGCAGGTGATGATAAGTACGGGCGGAA
GATAATTGTATTTAGTGCTTGCCGGATGCCCCCCAGCCACCAGCTGGACCACAGCAAGCTCTTG
GGGTACTTGAAACACACACTGGACCAGTATGTGGAAAGTGACTACACACTCCTGTACCTGCACC
ATGGCCTGACCAGTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATGCCTACCGAGAGTTTGA
CCGCAAGTACAAGAAGAACATCAAGGCTCTGTACATTGTGCACCCAACCATGTTCATCAAAACT
CTGCTTATCCTCTTTAAGCCCCTCATCAGTTTCAAGTTTGGACGGAAGATCTTCTATGTGAATT
ACCTGAGTGAGTTAAGCGAGCACGTGAAGCTGGAGCAGTTGGGGATCCCTCGCCAAGTGCTCAA
GTATGATGACTTCCTCAAGTCCACCCAGAAGAGCCCTGCAACAGCTCCCAAGCCCATGCCACCA
CGGCCCCCCCTGCCTAATCAGCAATTTGGGGTCTCGTTACAGCACCTCCGGGAGAAAAACCCGA
ACCAGGAGCCCATCCCCATTGTGCTCAGGGAGACAGTCGCCTACTTGCAGGCGCACGCTCTCAC
CGCCGAGGGCATCTTCCGGAGGTCTGCCAACACCCAGGTAGTAAGAGAAGTGCAGCAGAAATAC
AATATGGGGCTGCCAGTGGACTTTGACCAGTACAATGAGCTGCACCTGCCAGCCGTCATACTCA
AGACATTCCTTCGGGAGCTTCCTGAACCCTTGCTAACCTTTGACCTCTACCCCCACATTGTGGG
CTTCCTCGATCTTGATGACGACCAGAGAGTGGAGGTAACACAGCAGGTTCTCCAAACTCTGCCA
GAGGAGAACTACCGGGTACTTCACTTCCTGACTGCCTTCCTTGTACAGGTATCTGCCCACTCTT
ACCAGAACAGGATGAATAACACTAACCTGGCTGTGGTCTTCGGCCCTAACCTGCTGTGGGCTAA
GGATGCTGCCATCACCCTCAAGGCCATTAATCCCATCAACACCTTCACTAAATTCCTCCTGGAT
CATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGGGGGTCTGAGCTCAGCCCCCACCTCCAG
CCCCTTCTCTGGCAGCTCCAGTTGGACTTGTCCTCCTGGTATCAACCTTATTGGAGCTTCTGCC
TAGGAAGGGACCCTGAAGCCCCTCCCAGGAGATGTAGGTTGGAGCCCACTAACTGGGCAGCCCC
TCCTCTCCCTCTGTCCATCCCACCTTACCGGCCCTGGAGGCCTGTTACCCTAAGACATTTTCTT
TGCCTTACACTTCTCACTGCCTCTTTGGTTGCTGGGCTTGACTCTTCCAGGATTCAGCCCAAGT
AATCCTTTTCTTTTTTTCCTGCCTGTTTCCCTGGCAACTGTAGAAGACTACATCACTGCCAGCT
GTGCTGGTAGCTGGGGCTGGTCCTCTCTTGCCTGTTAGGAAGTGAGTGTTGACCTGGGTGCAAG
TTCCCCGTGCCTGCCCTCCCTACTAGTAGGGATGACCAGAGTTGGCCTGTCACTTCTGCCTCCA
GGGTCTGTTCCTCCCCAAGTGGTACTGCCCCCAGAGTGTCCTGTCCCCTCATTTCTGCCACACT
TGGCACCTTGGATATCTATCAAGACTCAGAATCTGAGTCCCTATTGAAATGGTCTTGTCCACTC
CCAGGGAGAGCCATAGTGTCTGGTGGGATCAGTTCCAGCAGTCCTGGCCCTCCATGCCTTCCCT
TCATTCTCACGTGCACAGACCTTCAGCCAAAGGCTGCACAGTAGATCTTTCTGGTGTGGAGTCA
CTCTAATCCCTGTTCTGGCCAGGGATTCTAATGCCTCAGGATCCATGGTAGCTCTCACCTCTTG
CCTGGGGACTCTTGGAGAGTCAGGAGCTCAGAAGCCCCTAAGATTGTCAGATGTTTTACTAATA
GATCACCCCTGCTAGATAGGTTCTAGCAATTCCCTTAGGGGAGTGTGGTGGCCATAGGCCCTCT
TGACTTTCAGAAAGCCTGAACCCCAGTGATTGGTAACTTTCACTCTATTCCTAGTGAAGCCTTG
TGACCCTCTTCCTGAAGTCTGTCCCCTAATGACAGGGAGCTAGCTGCAGTGGCCCTGCCCTACA
GGTGTGGCCAGGCACACCAGCTGGAGAGGCGGTACTGGGTACTGTAGGATCTGCACTGATGACC
TTGCAGAGGAGGCTCTTTGCTGCACCACTGTTGTGTCAGGTGCTTCAAGTGCTGCTGTCAGTCC
CCAGCCTTATACCTGCCCAGCCTGGGCCTTTGCTTCTGTCCACTCTGGTGTCGAGTGTCGCTAC
ACTCCACTTACTGAGGGCCATCCGGACCTCTTTTGTCTTTCTCTTGCCCCTGCCCTGTCAGTCT
GTGGCTGGGGGTGCTTTTACTGTGAATCCAGTGTTCACATTTACCACAATTTCCTTGGCACCAA
TCATGTATTTTACCGTTTGCACTTTTTGTATTTCAATAAAAATGTAAATGAAAAATGCC

hide sequence

RefSeq Acc Id:

XM_006234554 ⟹ XP_006234616

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,482 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,621,663 - 77,643,398 (+)	NCBI
Rnor_6.0	3	80,555,200 - 80,576,881 (+)	NCBI
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI

Sequence:

show sequence

GGTTGGGAGCTAAGGGCCCCCGAGGGGGCGGTTCCCATTCCCACCTCGGAGCCGGATGTTTGCC
GAGCTTTGACAGGCGTGGCAAAGGGAGCATTACCCGAACGCGGCTTCATCCACCCTCTGACTAG
CAGATAAACATCTGGGCTCAGAAGGCAACAGAAGCAGGTACTTACTGTGTACAAAAAGATCCCC
TTGGGTAGGTGTGAGGCTTCTCTTCTGGTTCTCCTTAGCCATGGATCCTCTCTCAGAACTGCAA
GATGACCTGACCCTGGATGATACCAGCCAAGCCCTGAACCAGTTGAAGCTGGCCTCTATTGATG
AGAAGAACTGGCCTTCTGATGAAATGCCAGACTTTCCCAAGTCAGATGACTCCAAAAGCAGCTC
TCCAGAACCTGTCACACACCTGAAGTGGGATGACCCTTACTACGACATTGCCAGGCACCAGATT
GTGGAAGTGGCAGGTGATGATAAGTACGGGCGGAAGATAATTGTATTTAGTGCTTGCCGGATGC
CCCCCAGCCACCAGCTGGACCACAGCAAGCTCTTGGGGTACTTGAAACACACACTGGACCAGTA
TGTGGAAAGTGACTACACACTCCTGTACCTGCACCATGGCCTGACCAGTGACAACAAGCCCTCC
CTCAGCTGGCTACGGGATGCCTACCGAGAGTTTGACCGCAAGTACAAGAAGAACATCAAGGCTC
TGTACATTGTGCACCCAACCATGTTCATCAAAACTCTGCTTATCCTCTTTAAGCCCCTCATCAG
TTTCAAGTTTGGACGGAAGATCTTCTATGTGAATTACCTGAGTGAGTTAAGCGAGCACGTGAAG
CTGGAGCAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGATGACTTCCTCAAGTCCACCCAGA
AGAGCCCTGCAACAGCTCCCAAGCCCATGCCACCACGGCCCCCCCTGCCTAATCAGCAATTTGG
GGTCTCGTTACAGCACCTCCGGGAGAAAAACCCGAACCAGGAGCCCATCCCCATTGTGCTCAGG
GAGACAGTCGCCTACTTGCAGGCGCACGCTCTCACCGCCGAGGGCATCTTCCGGAGGTCTGCCA
ACACCCAGGTAGTAAGAGAAGTGCAGCAGAAATACAATATGGGGCTGCCAGTGGACTTTGACCA
GTACAATGAGCTGCACCTGCCAGCCGTCATACTCAAGACATTCCTTCGGGAGCTTCCTGAACCC
TTGCTAACCTTTGACCTCTACCCCCACATTGTGGGCTTCCTCGATCTTGATGACGACCAGAGAG
TGGAGGTAACACAGCAGGTTCTCCAAACTCTGCCAGAGGAGAACTACCGGGTACTTCACTTCCT
GACTGCCTTCCTTGTACAGGTATCTGCCCACTCTTACCAGAACAGGATGAATAACACTAACCTG
GCTGTGGTCTTCGGCCCTAACCTGCTGTGGGCTAAGGATGCTGCCATCACCCTCAAGGCCATTA
ATCCCATCAACACCTTCACTAAATTCCTCCTGGATCATCAAGGGGAATTGTTCCCCAGCACAGA
TGCCCAGGGGGTCTGAGCTCAGCCCCCACCTCCAGCCCCTTCTCTGGCAGCTCCAGTTGGACTT
GTCCTCCTGGTATCAACCTTATTGGAGCTTCTGCCTAGGAAGGGACCCTGAAGCCCCTCCCAGG
AGATGTAGGTTGGAGCCCACTAACTGGGCAGCCCCTCCTCTCCCTCTGTCCATCCCACCTTACC
GGCCCTGGAGGCCTGTTACCCTAAGACATTTTCTTTGCCTTACACTTCTCACTGCCTCTTTGGT
TGCTGGGCTTGACTCTTCCAGGATTCAGCCCAAGTAATCCTTTTCTTTTTTTCCTGCCTGTTTC
CCTGGCAACTGTAGAAGACTACATCACTGCCAGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTT
GCCTGTTAGGAAGTGAGTGTTGACCTGGGTGCAAGTTCCCCGTGCCTGCCCTCCCTACTAGTAG
GGATGACCAGAGTTGGCCTGTCACTTCTGCCTCCAGGGTCTGTTCCTCCCCAAGTGGTACTGCC
CCCAGAGTGTCCTGTCCCCTCATTTCTGCCACACTTGGCACCTTGGATATCTATCAAGACTCAG
AATCTGAGTCCCTATTGAAATGGTCTTGTCCACTCCCAGGGAGAGCCATAGTGTCTGGTGGGAT
CAGTTCCAGCAGTCCTGGCCCTCCATGCCTTCCCTTCATTCTCACGTGCACAGACCTTCAGCCA
AAGGCTGCACAGTAGATCTTTCTGGTGTGGAGTCACTCTAATCCCTGTTCTGGCCAGGGATTCT
AATGCCTCAGGATCCATGGTAGCTCTCACCTCTTGCCTGGGGACTCTTGGAGAGTCAGGAGCTC
AGAAGCCCCTAAGATTGTCAGATGTTTTACTAATAGATCACCCCTGCTAGATAGGTTCTAGCAA
TTCCCTTAGGGGAGTGTGGTGGCCATAGGCCCTCTTGACTTTCAGAAAGCCTGAACCCCAGTGA
TTGGTAACTTTCACTCTATTCCTAGTGAAGCCTTGTGACCCTCTTCCTGAAGTCTGTCCCCTAA
TGACAGGGAGCTAGCTGCAGTGGCCCTGCCCTACAGGTGTGGCCAGGCACACCAGCTGGAGAGG
CGGTACTGGGTACTGTAGGATCTGCACTGATGACCTTGCAGAGGAGGCTCTTTGCTGCACCACT
GTTGTGTCAGGTGCTTCAAGTGCTGCTGTCAGTCCCCAGCCTTATACCTGCCCAGCCTGGGCCT
TTGCTTCTGTCCACTCTGGTGTCGAGTGTCGCTACACTCCACTTACTGAGGGCCATCCGGACCT
CTTTTGTCTTTCTCTTGCCCCTGCCCTGTCAGTCTGTGGCTGGGGGTGCTTTTACTGTGAATCC
AGTGTTCACATTTACCACAATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACTTTTTGT
ATTTCAATAAAAATGTAAATGAAAAATGCC

hide sequence

RefSeq Acc Id:

XM_006234556 ⟹ XP_006234618

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,465 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,621,663 - 77,643,398 (+)	NCBI
Rnor_6.0	3	80,555,200 - 80,576,881 (+)	NCBI
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI

Sequence:

show sequence

GGTTGGGAGCTAAGGGCCCCCGAGGGGGCGGTTCCCATTCCCACCTCGGAGCCGGATGTTTGCC
GAGCTTTGACAGGCGTGGCAAAGGGAGCATTACCCGAACGCGGCTTCATCCACCCTCTGACTAG
CAGATAAACATCTGGGCTCAGAAGGCAACAGAAGCAGCCATGGATCCTCTCTCAGAACTGCAAG
ATGACCTGACCCTGGATGATACCAGCCAAGCCCTGAACCAGTTGAAGCTGGCCTCTATTGATGA
GAAGAACTGGCCTTCTGATGAAATGCCAGACTTTCCCAAGTCAGATGACTCCAAAAGCAGCTCT
CCAGAACCTGTCACACACCTGAAGTGGGATGACCCTTACTACGACATTGCCAGGCACCAGATTG
TGGAAGTGGCAGGTGATGATAAGTACGGGCGGAAGATAATTGTATTTAGTGCTTGCCGGATGCC
CCCCAGCCACCAGCTGGACCACAGCAAGCTCTTGGGGTACTTGAAACACACACTGGACCAGTAT
GTGGAAAGTGACTACACACTCCTGTACCTGCACCATGGCCTGACCAGTGACAACAAGCCCTCCC
TCAGCTGGCTACGGGATGCCTACCGAGAGTTTGACCGCAAGTACAAGAAGAACATCAAGGCTCT
GTACATTGTGCACCCAACCATGTTCATCAAAACTCTGCTTATCCTCTTTAAGCCCCTCATCAGT
TTCAAGTTTGGACGGAAGATCTTCTATGTGAATTACCTGAGTGAGTTAAGCGAGCACGTGAAGC
TGGAGCAGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGATGACTTCCTCAAGTCCACCCAGAA
GAGCCCTGCAACAGCTCCCAAGCCCATGCCACCACGGCCCCCCCTGCCTAATCAGCAATTTGGG
GTCTCGTTACAGCACCTCCGGGAGAAAAACCCGAACCAGGAGCCCATCCCCATTGTGCTCAGGG
AGACAGTCGCCTACTTGCAGGCGCACGCTCTCACCGCCGAGGGCATCTTCCGGAGGTCTGCCAA
CACCCAGGTAGTAAGAGAAGTGCAGCAGAAATACAATATGGGGCTGCCAGTGGACTTTGACCAG
TACAATGAGCTGCACCTGCCAGCCGTCATACTCAAGACATTCCTTCGGGAGCTTCCTGAACCCT
TGCTAACCTTTGACCTCTACCCCCACATTGTGGGCTTCCTCGATCTTGATGACGACCAGAGAGT
GGAGGTAACACAGCAGGTTCTCCAAACTCTGCCAGAGGAGAACTACCGGGTACTTCACTTCCTG
ACTGCCTTCCTTGTACAGGTATCTGCCCACTCTTACCAGAACAGGATGAATAACACTAACCTGG
CTGTGGTCTTCGGCCCTAACCTGCTGTGGGCTAAGGATGCTGCCATCACCCTCAAGGCCATTAA
TCCCATCAACACCTTCACTAAATTCCTCCTGGATCATCAAGGGGAATTGTTCCCCAGCACAGAT
GCCCAGGGGGTCTGAGCTCAGCCCCCACCTCCAGCCCCTTCTCTGGCAGCTCCAGTTGGACTTG
TCCTCCTGGTATCAACCTTATTGGAGCTTCTGCCTAGGAAGGGACCCTGAAGCCCCTCCCAGGA
GATGTAGGTTGGAGCCCACTAACTGGGCAGCCCCTCCTCTCCCTCTGTCCATCCCACCTTACCG
GCCCTGGAGGCCTGTTACCCTAAGACATTTTCTTTGCCTTACACTTCTCACTGCCTCTTTGGTT
GCTGGGCTTGACTCTTCCAGGATTCAGCCCAAGTAATCCTTTTCTTTTTTTCCTGCCTGTTTCC
CTGGCAACTGTAGAAGACTACATCACTGCCAGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTG
CCTGTTAGGAAGTGAGTGTTGACCTGGGTGCAAGTTCCCCGTGCCTGCCCTCCCTACTAGTAGG
GATGACCAGAGTTGGCCTGTCACTTCTGCCTCCAGGGTCTGTTCCTCCCCAAGTGGTACTGCCC
CCAGAGTGTCCTGTCCCCTCATTTCTGCCACACTTGGCACCTTGGATATCTATCAAGACTCAGA
ATCTGAGTCCCTATTGAAATGGTCTTGTCCACTCCCAGGGAGAGCCATAGTGTCTGGTGGGATC
AGTTCCAGCAGTCCTGGCCCTCCATGCCTTCCCTTCATTCTCACGTGCACAGACCTTCAGCCAA
AGGCTGCACAGTAGATCTTTCTGGTGTGGAGTCACTCTAATCCCTGTTCTGGCCAGGGATTCTA
ATGCCTCAGGATCCATGGTAGCTCTCACCTCTTGCCTGGGGACTCTTGGAGAGTCAGGAGCTCA
GAAGCCCCTAAGATTGTCAGATGTTTTACTAATAGATCACCCCTGCTAGATAGGTTCTAGCAAT
TCCCTTAGGGGAGTGTGGTGGCCATAGGCCCTCTTGACTTTCAGAAAGCCTGAACCCCAGTGAT
TGGTAACTTTCACTCTATTCCTAGTGAAGCCTTGTGACCCTCTTCCTGAAGTCTGTCCCCTAAT
GACAGGGAGCTAGCTGCAGTGGCCCTGCCCTACAGGTGTGGCCAGGCACACCAGCTGGAGAGGC
GGTACTGGGTACTGTAGGATCTGCACTGATGACCTTGCAGAGGAGGCTCTTTGCTGCACCACTG
TTGTGTCAGGTGCTTCAAGTGCTGCTGTCAGTCCCCAGCCTTATACCTGCCCAGCCTGGGCCTT
TGCTTCTGTCCACTCTGGTGTCGAGTGTCGCTACACTCCACTTACTGAGGGCCATCCGGACCTC
TTTTGTCTTTCTCTTGCCCCTGCCCTGTCAGTCTGTGGCTGGGGGTGCTTTTACTGTGAATCCA
GTGTTCACATTTACCACAATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACTTTTTGTA
TTTCAATAAAAATGTAAATGAAAAATGCC

hide sequence

RefSeq Acc Id:

XM_006234557 ⟹ XP_006234619

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,525 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,621,726 - 77,643,400 (+)	NCBI
Rnor_6.0	3	80,555,207 - 80,576,881 (+)	NCBI
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI

Sequence:

show sequence

AGCTAAGGGCCCCCGAGGGGGCGGTTCCCATTCCCACCTCGGAGCCGGATGTTTGCCGAGCTTT
GACAGGCGTGGCAAAGGGAGCATTACCCGAACGCGGTGAGCTGCAAAGCGCGGGGTCTCACTGG
GCGTGGTGGCTTCATCCACCCTCTGACTAGCAGATAAACATCTGGGCTCAGAAGGCAACAGAAG
CAGCCATGGATCCTCTCTCAGAACTGCAAGATGACCTGACCCTGGATGATACCAGCCAAGCCCT
GAACCAGTTGAAGCTGGCCTCTATTGATGAGAAGAACTGGCCTTCTGATGAAATGCCAGACTTT
CCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGAACCTGTCACACACCTGAAGTGGGATGACC
CTTACTACGACATTGCCAGGCACCAGATTGTGGAAGTGGCAGGTGATGATAAGTACGGGCGGAA
GATAATTGTATTTAGTGCTTGCCGGATGCCCCCCAGCCACCAGCTGGACCACAGCAAGCTCTTG
GGGTACTTGAAACACACACTGGACCAGTATGTGGAAAGTGACTACACACTCCTGTACCTGCACC
ATGGCCTGACCAGTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATGCCTACCGAGAGTTTGA
CCGCAAGTACAAGAAGAACATCAAGGCTCTGTACATTGTGCACCCAACCATGTTCATCAAAACT
CTGCTTATCCTCTTTAAGCCCCTCATCAGTTTCAAGTTTGGACGGAAGATCTTCTATGTGAATT
ACCTGAGTGAGTTAAGCGAGCACGTGAAGCTGGAGCAGTTGGGGATCCCTCGCCAAGTGCTCAA
GTATGATGACTTCCTCAAGTCCACCCAGAAGAGCCCTGCAACAGCTCCCAAGCCCATGCCACCA
CGGCCCCCCCTGCCTAATCAGCAATTTGGGGTCTCGTTACAGCACCTCCGGGAGAAAAACCCGA
ACCAGGAGCCCATCCCCATTGTGCTCAGGGAGACAGTCGCCTACTTGCAGGCGCACGCTCTCAC
CGCCGAGGGCATCTTCCGGAGGTCTGCCAACACCCAGGTAGTAAGAGAAGTGCAGCAGAAATAC
AATATGGGGCTGCCAGTGGACTTTGACCAGTACAATGAGCTGCACCTGCCAGCCGTCATACTCA
AGACATTCCTTCGGGAGCTTCCTGAACCCTTGCTAACCTTTGACCTCTACCCCCACATTGTGGG
CTTCCTCGATCTTGATGACGACCAGAGAGTGGAGGTAACACAGCAGGTTCTCCAAACTCTGCCA
GAGGAGAACTACCGGGTACTTCACTTCCTGACTGCCTTCCTTGTACAGGTATCTGCCCACTCTT
ACCAGAACAGGATGAATAACACTAACCTGGCTGTGGTCTTCGGCCCTAACCTGCTGTGGGCTAA
GGATGCTGCCATCACCCTCAAGGCCATTAATCCCATCAACACCTTCACTAAATTCCTCCTGGAT
CATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGGGGGTCTGAGCTCAGCCCCCACCTCCAG
CCCCTTCTCTGGCAGCTCCAGTTGGACTTGTCCTCCTGGTATCAACCTTATTGGAGCTTCTGCC
TAGGAAGGGACCCTGAAGCCCCTCCCAGGAGATGTAGGTTGGAGCCCACTAACTGGGCAGCCCC
TCCTCTCCCTCTGTCCATCCCACCTTACCGGCCCTGGAGGCCTGTTACCCTAAGACATTTTCTT
TGCCTTACACTTCTCACTGCCTCTTTGGTTGCTGGGCTTGACTCTTCCAGGATTCAGCCCAAGT
AATCCTTTTCTTTTTTTCCTGCCTGTTTCCCTGGCAACTGTAGAAGACTACATCACTGCCAGCT
GTGCTGGTAGCTGGGGCTGGTCCTCTCTTGCCTGTTAGGAAGTGAGTGTTGACCTGGGTGCAAG
TTCCCCGTGCCTGCCCTCCCTACTAGTAGGGATGACCAGAGTTGGCCTGTCACTTCTGCCTCCA
GGGTCTGTTCCTCCCCAAGTGGTACTGCCCCCAGAGTGTCCTGTCCCCTCATTTCTGCCACACT
TGGCACCTTGGATATCTATCAAGACTCAGAATCTGAGTCCCTATTGAAATGGTCTTGTCCACTC
CCAGGGAGAGCCATAGTGTCTGGTGGGATCAGTTCCAGCAGTCCTGGCCCTCCATGCCTTCCCT
TCATTCTCACGTGCACAGACCTTCAGCCAAAGGCTGCACAGTAGATCTTTCTGGTGTGGAGTCA
CTCTAATCCCTGTTCTGGCCAGGGATTCTAATGCCTCAGGATCCATGGTAGCTCTCACCTCTTG
CCTGGGGACTCTTGGAGAGTCAGGAGCTCAGAAGCCCCTAAGATTGTCAGATGTTTTACTAATA
GATCACCCCTGCTAGATAGGTTCTAGCAATTCCCTTAGGGGAGTGTGGTGGCCATAGGCCCTCT
TGACTTTCAGAAAGCCTGAACCCCAGTGATTGGTAACTTTCACTCTATTCCTAGTGAAGCCTTG
TGACCCTCTTCCTGAAGTCTGTCCCCTAATGACAGGGAGCTAGCTGCAGTGGCCCTGCCCTACA
GGTGTGGCCAGGCACACCAGCTGGAGAGGCGGTACTGGGTACTGTAGGATCTGCACTGATGACC
TTGCAGAGGAGGCTCTTTGCTGCACCACTGTTGTGTCAGGTGCTTCAAGTGCTGCTGTCAGTCC
CCAGCCTTATACCTGCCCAGCCTGGGCCTTTGCTTCTGTCCACTCTGGTGTCGAGTGTCGCTAC
ACTCCACTTACTGAGGGCCATCCGGACCTCTTTTGTCTTTCTCTTGCCCCTGCCCTGTCAGTCT
GTGGCTGGGGGTGCTTTTACTGTGAATCCAGTGTTCACATTTACCACAATTTCCTTGGCACCAA
TCATGTATTTTACCGTTTGCACTTTTTGTATTTCAATAAAAATGTAAATGAAAAATGCC

hide sequence

RefSeq Acc Id:

XM_006234558 ⟹ XP_006234620

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,498 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,621,720 - 77,643,400 (+)	NCBI
Rnor_6.0	3	80,555,207 - 80,576,881 (+)	NCBI
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI

Sequence:

show sequence

AGCTAAGGGCCCCCGAGGGGGCGGTTCCCATTCCCACCTCGGAGCCGGATGTTTGCCGAGCTTT
GACAGGCGTGGCAAAGGGAGCATTACCCGAACGCGGTGAGCTGCAAAGCGCGGGGTCTCACTGG
GCGTGGTGCCATGGATCCTCTCTCAGAACTGCAAGATGACCTGACCCTGGATGATACCAGCCAA
GCCCTGAACCAGTTGAAGCTGGCCTCTATTGATGAGAAGAACTGGCCTTCTGATGAAATGCCAG
ACTTTCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGAACCTGTCACACACCTGAAGTGGGA
TGACCCTTACTACGACATTGCCAGGCACCAGATTGTGGAAGTGGCAGGTGATGATAAGTACGGG
CGGAAGATAATTGTATTTAGTGCTTGCCGGATGCCCCCCAGCCACCAGCTGGACCACAGCAAGC
TCTTGGGGTACTTGAAACACACACTGGACCAGTATGTGGAAAGTGACTACACACTCCTGTACCT
GCACCATGGCCTGACCAGTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATGCCTACCGAGAG
TTTGACCGCAAGTACAAGAAGAACATCAAGGCTCTGTACATTGTGCACCCAACCATGTTCATCA
AAACTCTGCTTATCCTCTTTAAGCCCCTCATCAGTTTCAAGTTTGGACGGAAGATCTTCTATGT
GAATTACCTGAGTGAGTTAAGCGAGCACGTGAAGCTGGAGCAGTTGGGGATCCCTCGCCAAGTG
CTCAAGTATGATGACTTCCTCAAGTCCACCCAGAAGAGCCCTGCAACAGCTCCCAAGCCCATGC
CACCACGGCCCCCCCTGCCTAATCAGCAATTTGGGGTCTCGTTACAGCACCTCCGGGAGAAAAA
CCCGAACCAGGAGCCCATCCCCATTGTGCTCAGGGAGACAGTCGCCTACTTGCAGGCGCACGCT
CTCACCGCCGAGGGCATCTTCCGGAGGTCTGCCAACACCCAGGTAGTAAGAGAAGTGCAGCAGA
AATACAATATGGGGCTGCCAGTGGACTTTGACCAGTACAATGAGCTGCACCTGCCAGCCGTCAT
ACTCAAGACATTCCTTCGGGAGCTTCCTGAACCCTTGCTAACCTTTGACCTCTACCCCCACATT
GTGGGCTTCCTCGATCTTGATGACGACCAGAGAGTGGAGGTAACACAGCAGGTTCTCCAAACTC
TGCCAGAGGAGAACTACCGGGTACTTCACTTCCTGACTGCCTTCCTTGTACAGGTATCTGCCCA
CTCTTACCAGAACAGGATGAATAACACTAACCTGGCTGTGGTCTTCGGCCCTAACCTGCTGTGG
GCTAAGGATGCTGCCATCACCCTCAAGGCCATTAATCCCATCAACACCTTCACTAAATTCCTCC
TGGATCATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGGGGGTCTGAGCTCAGCCCCCACC
TCCAGCCCCTTCTCTGGCAGCTCCAGTTGGACTTGTCCTCCTGGTATCAACCTTATTGGAGCTT
CTGCCTAGGAAGGGACCCTGAAGCCCCTCCCAGGAGATGTAGGTTGGAGCCCACTAACTGGGCA
GCCCCTCCTCTCCCTCTGTCCATCCCACCTTACCGGCCCTGGAGGCCTGTTACCCTAAGACATT
TTCTTTGCCTTACACTTCTCACTGCCTCTTTGGTTGCTGGGCTTGACTCTTCCAGGATTCAGCC
CAAGTAATCCTTTTCTTTTTTTCCTGCCTGTTTCCCTGGCAACTGTAGAAGACTACATCACTGC
CAGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTGCCTGTTAGGAAGTGAGTGTTGACCTGGGT
GCAAGTTCCCCGTGCCTGCCCTCCCTACTAGTAGGGATGACCAGAGTTGGCCTGTCACTTCTGC
CTCCAGGGTCTGTTCCTCCCCAAGTGGTACTGCCCCCAGAGTGTCCTGTCCCCTCATTTCTGCC
ACACTTGGCACCTTGGATATCTATCAAGACTCAGAATCTGAGTCCCTATTGAAATGGTCTTGTC
CACTCCCAGGGAGAGCCATAGTGTCTGGTGGGATCAGTTCCAGCAGTCCTGGCCCTCCATGCCT
TCCCTTCATTCTCACGTGCACAGACCTTCAGCCAAAGGCTGCACAGTAGATCTTTCTGGTGTGG
AGTCACTCTAATCCCTGTTCTGGCCAGGGATTCTAATGCCTCAGGATCCATGGTAGCTCTCACC
TCTTGCCTGGGGACTCTTGGAGAGTCAGGAGCTCAGAAGCCCCTAAGATTGTCAGATGTTTTAC
TAATAGATCACCCCTGCTAGATAGGTTCTAGCAATTCCCTTAGGGGAGTGTGGTGGCCATAGGC
CCTCTTGACTTTCAGAAAGCCTGAACCCCAGTGATTGGTAACTTTCACTCTATTCCTAGTGAAG
CCTTGTGACCCTCTTCCTGAAGTCTGTCCCCTAATGACAGGGAGCTAGCTGCAGTGGCCCTGCC
CTACAGGTGTGGCCAGGCACACCAGCTGGAGAGGCGGTACTGGGTACTGTAGGATCTGCACTGA
TGACCTTGCAGAGGAGGCTCTTTGCTGCACCACTGTTGTGTCAGGTGCTTCAAGTGCTGCTGTC
AGTCCCCAGCCTTATACCTGCCCAGCCTGGGCCTTTGCTTCTGTCCACTCTGGTGTCGAGTGTC
GCTACACTCCACTTACTGAGGGCCATCCGGACCTCTTTTGTCTTTCTCTTGCCCCTGCCCTGTC
AGTCTGTGGCTGGGGGTGCTTTTACTGTGAATCCAGTGTTCACATTTACCACAATTTCCTTGGC
ACCAATCATGTATTTTACCGTTTGCACTTTTTGTATTTCAATAAAAATGTAAATGAAAAATGCC

hide sequence

RefSeq Acc Id:

XM_006234559 ⟹ XP_006234621

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,081,787 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,626,018 - 77,643,400 (+)	NCBI
Rnor_6.0	3	80,559,474 - 80,576,881 (+)	NCBI
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI

Sequence:

show sequence

GTGCCCAGCATTGAACCTCTTTCCTCATACTCTGTGCCCGTGGCACAGAGAAGCCTCCTGTGCC
ACCAAGAAAGCACATTTTGTAGCCTCTGGTCTGCTCTTGAGCATATGGACCTTCCCTGATGAGC
AGGGGTTGGTTTCGACTGGTTTGCACCTGCCACTGCTTCCTGACCTGCCGTGTCATTGTCTCCT
GCTGCAGCCGTGGTGTGGGAGACCTTGTGCCTCGCTTTGAAGTTGGAAAGTTGAGTTTGCTCTC
CAGTTCTGCTCTCTGAGCTCCTTGCTCATACACACTGTTGTCAGGAGGACCCTGGGAAACAGAA
CACAGTTGTTCCTGAATGAGTGGCCTTGCCCTTTCTCTCTTACCCTTTCTTCTCTCCCTTGCCC
TGAGGTTGGCTTTTCTCTCATCAGTCACTGGAGATGGGGATAATGTCACCTCTTCTGAGGGTTT
GCAATGGCTCCCTAGAACATCCAGTTTCTAGTGGATGCACTGCTGTGCCAGGAATGGGGGTAGA
AATCCTTTGGGTTTCTGCCTCAGGGAGCTCCATCCTATTCATAAGGCAAGCCCCAGAAGGGACA
TGGAGTAGGGGAGGCAGTGAGCCTCAGAGAGTTGTCTCTAGCTGTCAGGGCTAGAAGAGGCCAT
AAGATCTAAGGCATTTCCATGGTGGCAGTGCTTCTGATGCTTACCCTGGCCTGGGTTAGAGGTG
GTCTCTCTCATCCCTGCAGAAGCAGGGCAGAGCTCCTTCCTGGCCTAGGTATCTAATGTCTACC
TGGCGACCCTGTGGTCAGTCCCGAGACCTCTGTGGGGTGCCCTGCCTGTCAGCAAACCACCACT
GTGCAGCTTTTTGTTTGCTTGTTTCCACAGACTGTGGCGAGCCTGAGGGGGCCCAGCCAGGTAG
GTGCCAGTTCTGGCTGTCTGTGCTTGGCCTCTCCTGGCTGTGGCCTCTGGGTCTACGAATCAAA
AAGTGCTCTTGGTGGAGGCCGGTGGGACCAGCTTAATTAGAGTCCCATTTTAGGGAGTTGGGAG
CTGGTGGTGGCTACGGAAGCCAGAAGTAGCAGAGTTTGTGAGAGGTGGAGGCTGTGTGGTGACA
CACCTAAAATCCAGGGGAAATGCAGCCTCAGGAAGCTCCTGGGACAGGCAAGACCTGGCCAGCA
TGTGCTGTGGCAACTCTGTGGCGACCCTGGTGGTGGTATCCCCATGTGCCTGCCTTGCTGGTAA
GGCTTGTTTGAAGAACTGGTGGTATGTGTCTGGCACTAGAATTCAGAGAAAGAGCCCATGTGGA
CAAGCGAGGAGGAGGTTGTCAAGGACCTCAGTCAACTGTGACTTGGTCCAGGTAGGGTCTTTCC
ATTGCTGTTCTAGAAAGGAGGCAAAGAGACCATTATTAGTAACATTTTCAGTTTCTACAACAGC
TGGTTTCAAGCTTCTGACACAATGTCAACTGGCTTGCAAAATTCCTAATGATTAAAAACTTTAA
CAAATGTCTGAGCTGCCATCACAAACCATGAGCTTTCTCAGTCCTGGCCCCCCACCTTAATTGC
CCTTGGCTTGTGCTGCAGTTTGCAGTCAGCAGTATCCAGAAAGCTGGCTACAGCTGCTGTCCTG
ACTAAAAATACCCATGCTGCCCCTGATTAGTATCTGGGGAATGCCTCGGTCTGCCTCTCAGGCT
TTCGGCACTACACCCTTGCTCATTAAGCCCTCTCCCCAGAGCCCTAGAGAAACCACAGTTGATG
GTCCCACTTCTCTCTGAAGGTTCCAGGGCAGGGACAGTTCCAGGCCCATCTGATGGCAGGTGAT
GATAAGTACGGGCGGAAGATAATTGTATTTAGTGCTTGCCGGATGCCCCCCAGCCACCAGCTGG
ACCACAGCAAGCTCTTGGGGTACTTGAAACACACACTGGACCAGTATGTGGAAAGTGACTACAC
ACTCCTGTACCTGCACCATGGCCTGACCAGTGACAACAAGCCCTCCCTCAGCTGGCTACGGGAT
GCCTACCGAGAGTTTGACCGCAAGTACAAGAAGAACATCAAGGCTCTGTACATTGTGCACCCAA
CCATGTTCATCAAAACTCTGCTTATCCTCTTTAAGCCCCTCATCAGTTTCAAGTTTGGACGGAA
GATCTTCTATGTGAATTACCTGAGTGAGTTAAGCGAGCACGTGAAGCTGGAGCAGTTGGGGATC
CCTCGCCAAGTGCTCAAGTATGATGACTTCCTCAAGTCCACCCAGAAGAGCCCTGCAACAGCTC
CCAAGCCCATGCCACCACGGCCCCCCCTGCCTAATCAGCAATTTGGGGTCTCGTTACAGCACCT
CCGGGAGAAAAACCCGAACCAGGAGCCCATCCCCATTGTGCTCAGGGAGACAGTCGCCTACTTG
CAGGCGCACGCTCTCACCGCCGAGGGCATCTTCCGGAGGTCTGCCAACACCCAGGTAGTAAGAG
AAGTGCAGCAGAAATACAATATGGGGCTGCCAGTGGACTTTGACCAGTACAATGAGCTGCACCT
GCCAGCCGTCATACTCAAGACATTCCTTCGGGAGCTTCCTGAACCCTTGCTAACCTTTGACCTC
TACCCCCACATTGTGGGCTTCCTCGATCTTGATGACGACCAGAGAGTGGAGGTAACACAGCAGG
TTCTCCAAACTCTGCCAGAGGAGAACTACCGGGTACTTCACTTCCTGACTGCCTTCCTTGTACA
GGTATCTGCCCACTCTTACCAGAACAGGATGAATAACACTAACCTGGCTGTGGTCTTCGGCCCT
AACCTGCTGTGGGCTAAGGATGCTGCCATCACCCTCAAGGCCATTAATCCCATCAACACCTTCA
CTAAATTCCTCCTGGATCATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGGGGGTCTGAGC
TCAGCCCCCACCTCCAGCCCCTTCTCTGGCAGCTCCAGTTGGACTTGTCCTCCTGGTATCAACC
TTATTGGAGCTTCTGCCTAGGAAGGGACCCTGAAGCCCCTCCCAGGAGATGTAGGTTGGAGCCC
ACTAACTGGGCAGCCCCTCCTCTCCCTCTGTCCATCCCACCTTACCGGCCCTGGAGGCCTGTTA
CCCTAAGACATTTTCTTTGCCTTACACTTCTCACTGCCTCTTTGGTTGCTGGGCTTGACTCTTC
CAGGATTCAGCCCAAGTAATCCTTTTCTTTTTTTCCTGCCTGTTTCCCTGGCAACTGTAGAAGA
CTACATCACTGCCAGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTGCCTGTTAGGAAGTGAGT
GTTGACCTGGGTGCAAGTTCCCCGTGCCTGCCCTCCCTACTAGTAGGGATGACCAGAGTTGGCC
TGTCACTTCTGCCTCCAGGGTCTGTTCCTCCCCAAGTGGTACTGCCCCCAGAGTGTCCTGTCCC
CTCATTTCTGCCACACTTGGCACCTTGGATATCTATCAAGACTCAGAATCTGAGTCCCTATTGA
AATGGTCTTGTCCACTCCCAGGGAGAGCCATAGTGTCTGGTGGGATCAGTTCCAGCAGTCCTGG
CCCTCCATGCCTTCCCTTCATTCTCACGTGCACAGACCTTCAGCCAAAGGCTGCACAGTAGATC
TTTCTGGTGTGGAGTCACTCTAATCCCTGTTCTGGCCAGGGATTCTAATGCCTCAGGATCCATG
GTAGCTCTCACCTCTTGCCTGGGGACTCTTGGAGAGTCAGGAGCTCAGAAGCCCCTAAGATTGT
CAGATGTTTTACTAATAGATCACCCCTGCTAGATAGGTTCTAGCAATTCCCTTAGGGGAGTGTG
GTGGCCATAGGCCCTCTTGACTTTCAGAAAGCCTGAACCCCAGTGATTGGTAACTTTCACTCTA
TTCCTAGTGAAGCCTTGTGACCCTCTTCCTGAAGTCTGTCCCCTAATGACAGGGAGCTAGCTGC
AGTGGCCCTGCCCTACAGGTGTGGCCAGGCACACCAGCTGGAGAGGCGGTACTGGGTACTGTAG
GATCTGCACTGATGACCTTGCAGAGGAGGCTCTTTGCTGCACCACTGTTGTGTCAGGTGCTTCA
AGTGCTGCTGTCAGTCCCCAGCCTTATACCTGCCCAGCCTGGGCCTTTGCTTCTGTCCACTCTG
GTGTCGAGTGTCGCTACACTCCACTTACTGAGGGCCATCCGGACCTCTTTTGTCTTTCTCTTGC
CCCTGCCCTGTCAGTCTGTGGCTGGGGGTGCTTTTACTGTGAATCCAGTGTTCACATTTACCAC
AATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACTTTTTGTATTTCAATAAAAATGTAA
ATGAAAAATGCC

hide sequence

RefSeq Acc Id:

XM_006234560 ⟹ XP_006234622

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,462 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,621,717 - 77,643,400 (+)	NCBI
Rnor_6.0	3	80,555,207 - 80,576,881 (+)	NCBI
Rnor_5.0	3	87,254,371 - 87,275,981 (+)	NCBI

Sequence:

show sequence

AGCTAAGGGCCCCCGAGGGGGCGGTTCCCATTCCCACCTCGGAGCCGGATGTTTGCCGAGCTTT
GACAGGCGTGGCAAAGGGAGCATTACCCGAACGCGGTGAGCTGCAAAGCGCGGGGTCTCACTGG
GCGTGGTGGCTTCTCTTCTGGTTCTCCTTAGCCATGGATCCTCTCTCAGAACTGCAAGATGACC
TGACCCTGGATGATACCAGCCAAGCCCTGAACCAGTTGAAGCTGGCCTCTATTGATGAGAAGAA
CTGGCCTTCTGATGAAATGCCAGACTTTCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGAA
CCTGTCACACACCTGAAGTGGGATGACCCTTACTACGACATTGCCAGGCACCAGATTGTGGAAG
TGGCAGGTGATGATAAGTACGGGCGGAAGATAATTGTATTTAGTGCTTGCCGGATGCCCCCCAG
CCACCAGCTGGACCACAGCAAGCTCTTGGGGTACTTGAAACACACACTGGACCAGTATGTGGAA
AGTGACTACACACTCCTGTACCTGCACCATGGCCTGACCAGTGACAACAAGCCCTCCCTCAGCT
GGCTACGGGATGCCTACCGAGAGTTTGACCGCAAGTACAAGAAGAACATCAAGGCTCTGTACAT
TGTGCACCCAACCATGTTCATCAAAACTCTGCTTATCCTCTTTAAGCCCCTCATCAGTTTCAAG
TTTGGACGGAAGATCTTCTATGTGAATTACCTGAGTGAGTTAAGCGAGCACGTGAAGCTGGAGC
AGTTGGGGATCCCTCGCCAAGTGCTCAAGTATGATGACTTCCTCAAGTCCACCCAGAAGAGCCC
TGCAACAGCTCCCAAGCCCATGCCACCACGGCCCCCCCTGCCTAATCAGCAATTTGGGGTCTCG
TTACAGCACCTCCGGGAGAAAAACCCGAACCAGGAGCCCATCCCCATTGTGCTCAGGGAGACAG
TCGCCTACTTGCAGGCGCACGCTCTCACCGCCGAGGGCATCTTCCGGAGGTCTGCCAACACCCA
GGTAGTAAGAGAAGTGCAGCAGAAATACAATATGGGGCTGCCAGTGGACTTTGACCAGTACAAT
GAGCTGCACCTGCCAGCCGTCATACTCAAGACATTCCTTCGGGAGCTTCCTGAACCCTTGCTAA
CCTTTGACCTCTACCCCCACATTGTGGGCTTCCTCGATCTTGATGACGACCAGAGAGTGGAGGT
AACACAGCAGGTTCTCCAAACTCTGCCAGAGGAGAACTACCGGGTACTTCACTTCCTGACTGCC
TTCCTTGTACAGGTATCTGCCCACTCTTACCAGAACAGGATGAATAACACTAACCTGGCTGTGG
TCTTCGGCCCTAACCTGCTGTGGGCTAAGGATGCTGCCATCACCCTCAAGGCCATTAATCCCAT
CAACACCTTCACTAAATTCCTCCTGGATCATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAG
GGGGTCTGAGCTCAGCCCCCACCTCCAGCCCCTTCTCTGGCAGCTCCAGTTGGACTTGTCCTCC
TGGTATCAACCTTATTGGAGCTTCTGCCTAGGAAGGGACCCTGAAGCCCCTCCCAGGAGATGTA
GGTTGGAGCCCACTAACTGGGCAGCCCCTCCTCTCCCTCTGTCCATCCCACCTTACCGGCCCTG
GAGGCCTGTTACCCTAAGACATTTTCTTTGCCTTACACTTCTCACTGCCTCTTTGGTTGCTGGG
CTTGACTCTTCCAGGATTCAGCCCAAGTAATCCTTTTCTTTTTTTCCTGCCTGTTTCCCTGGCA
ACTGTAGAAGACTACATCACTGCCAGCTGTGCTGGTAGCTGGGGCTGGTCCTCTCTTGCCTGTT
AGGAAGTGAGTGTTGACCTGGGTGCAAGTTCCCCGTGCCTGCCCTCCCTACTAGTAGGGATGAC
CAGAGTTGGCCTGTCACTTCTGCCTCCAGGGTCTGTTCCTCCCCAAGTGGTACTGCCCCCAGAG
TGTCCTGTCCCCTCATTTCTGCCACACTTGGCACCTTGGATATCTATCAAGACTCAGAATCTGA
GTCCCTATTGAAATGGTCTTGTCCACTCCCAGGGAGAGCCATAGTGTCTGGTGGGATCAGTTCC
AGCAGTCCTGGCCCTCCATGCCTTCCCTTCATTCTCACGTGCACAGACCTTCAGCCAAAGGCTG
CACAGTAGATCTTTCTGGTGTGGAGTCACTCTAATCCCTGTTCTGGCCAGGGATTCTAATGCCT
CAGGATCCATGGTAGCTCTCACCTCTTGCCTGGGGACTCTTGGAGAGTCAGGAGCTCAGAAGCC
CCTAAGATTGTCAGATGTTTTACTAATAGATCACCCCTGCTAGATAGGTTCTAGCAATTCCCTT
AGGGGAGTGTGGTGGCCATAGGCCCTCTTGACTTTCAGAAAGCCTGAACCCCAGTGATTGGTAA
CTTTCACTCTATTCCTAGTGAAGCCTTGTGACCCTCTTCCTGAAGTCTGTCCCCTAATGACAGG
GAGCTAGCTGCAGTGGCCCTGCCCTACAGGTGTGGCCAGGCACACCAGCTGGAGAGGCGGTACT
GGGTACTGTAGGATCTGCACTGATGACCTTGCAGAGGAGGCTCTTTGCTGCACCACTGTTGTGT
CAGGTGCTTCAAGTGCTGCTGTCAGTCCCCAGCCTTATACCTGCCCAGCCTGGGCCTTTGCTTC
TGTCCACTCTGGTGTCGAGTGTCGCTACACTCCACTTACTGAGGGCCATCCGGACCTCTTTTGT
CTTTCTCTTGCCCCTGCCCTGTCAGTCTGTGGCTGGGGGTGCTTTTACTGTGAATCCAGTGTTC
ACATTTACCACAATTTCCTTGGCACCAATCATGTATTTTACCGTTTGCACTTTTTGTATTTCAA
TAAAAATGTAAATGAAAAATGCC

hide sequence

RefSeq Acc Id:

XM_017591716 ⟹ XP_017447205

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,529 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,621,726 - 77,643,400 (+)	NCBI
Rnor_6.0	3	80,555,207 - 80,576,881 (+)	NCBI

Sequence:

show sequence

AGCTAAGGGCCCCCGAGGGGGCGGTTCCCATTCCCACCTCGGAGCCGGATGTTTGCCGAGCTTT
GACAGGCGTGGCAAAGGGAGCATTACCCGAACGCGGTGAGCTGCAAAGCGCGGGGTCTCACTGG
GCGTGGTGGCTTCATCCACCCTCTGACTAGCAGATAAACATCTGGGCTCAGAAGGCAACAGAAG
CAGGTACTTACTGTGTACAAAAAGATCCCCTTGGGTAGGTGTGAGGCTTCTCTTCTGGTTCTCC
TTAGCCATGGATCCTCTCTCAGAACTGCAAGATGACCTGACCCTGGATGATACCAGCCAAGCCC
TGAACCAGTTGAAGCTGGCCTCTATTGATGAGAAGAACTGGCCTTCTGATGAAATGCCAGACTT
TCCCAAGTCAGATGACTCCAAAAGCAGCTCTCCAGAACCTGTCACACACCTGAAGTGGGATGAC
CCTTACTACGACATTGCCAGGCACCAGATTGTGGAAGTGGCAGGTGATGATAAGTACGGGCGGA
AGATAATTGTATTTAGTGCTTGCCGGATGCCCCCCAGCCACCAGCTGGACCACAGCAAGCTCTT
GGGGTACTTGAAACACACACTGGACCAGTATGTGGAAAGTGACTACACACTCCTGTACCTGCAC
CATGGCCTGACCAGTGACAACAAGCCCTCCCTCAGCTGGCTACGGGATGCCTACCGAGAGTTTG
ACCGCAAGTACAAGAAGAACATCAAGGCTCTGTACATTGTGCACCCAACCATGTTCATCAAAAC
TCTGCTTATCCTCTTTAAGCCCCTCATCAGTTTCAAGTTTGGACGGAAGATCTTCTATGTGAAT
TACCTGAGTGAGTTAAGCGAGCACGTGAAGCTGGAGCAGTTGGGGATCCCTCGCCAAGTGCTCA
AGTATGATGACTTCCTCAAGTCCACCCAGAAGAGCCCTGCAACAGCTCCCAAGCCCATGCCACC
ACGGCCCCCCCTGCCTAATCAGCAATTTGGGGTCTCGTTACAGCACCTCCGGGAGAAAAACCCG
AACCAGGAGCCCATCCCCATTGTGCTCAGGGAGACAGTCGCCTACTTGCAGGCGCACGCTCTCA
CCGCCGAGGGCATCTTCCGGAGGTCTGCCAACACCCAGGTAGTAAGAGAAGTGCAGCAGAAATA
CAATATGGGGCTGCCAGTGGACTTTGACCAGTACAATGAGCTGCACCTGCCAGCCGTCATACTC
AAGACATTCCTTCGGGAGCTTCCTGAACCCTTGCTAACCTTTGACCTCTACCCCCACATTGTGG
GCTTCCTCGATCTTGATGACGACCAGAGAGTGGAGGTAACACAGCAGGTTCTCCAAACTCTGCC
AGAGGAGAACTACCGGGTACTTCACTTCCTGACTGCCTTCCTTGTACAGGTATCTGCCCACTCT
TACCAGAACAGGATGAATAACACTAACCTGGCTGTGGTCTTCGGCCCTAACCTGCTGTGGGCTA
AGGATGCTGCCATCACCCTCAAGGCCATTAATCCCATCAACACCTTCACTAAATTCCTCCTGGA
TCATCAAGGGGAATTGTTCCCCAGCACAGATGCCCAGGGGGTCTGAGCTCAGCCCCCACCTCCA
GCCCCTTCTCTGGCAGCTCCAGTTGGACTTGTCCTCCTGGTATCAACCTTATTGGAGCTTCTGC
CTAGGAAGGGACCCTGAAGCCCCTCCCAGGAGATGTAGGTTGGAGCCCACTAACTGGGCAGCCC
CTCCTCTCCCTCTGTCCATCCCACCTTACCGGCCCTGGAGGCCTGTTACCCTAAGACATTTTCT
TTGCCTTACACTTCTCACTGCCTCTTTGGTTGCTGGGCTTGACTCTTCCAGGATTCAGCCCAAG
TAATCCTTTTCTTTTTTTCCTGCCTGTTTCCCTGGCAACTGTAGAAGACTACATCACTGCCAGC
TGTGCTGGTAGCTGGGGCTGGTCCTCTCTTGCCTGTTAGGAAGTGAGTGTTGACCTGGGTGCAA
GTTCCCCGTGCCTGCCCTCCCTACTAGTAGGGATGACCAGAGTTGGCCTGTCACTTCTGCCTCC
AGGGTCTGTTCCTCCCCAAGTGGTACTGCCCCCAGAGTGTCCTGTCCCCTCATTTCTGCCACAC
TTGGCACCTTGGATATCTATCAAGACTCAGAATCTGAGTCCCTATTGAAATGGTCTTGTCCACT
CCCAGGGAGAGCCATAGTGTCTGGTGGGATCAGTTCCAGCAGTCCTGGCCCTCCATGCCTTCCC
TTCATTCTCACGTGCACAGACCTTCAGCCAAAGGCTGCACAGTAGATCTTTCTGGTGTGGAGTC
ACTCTAATCCCTGTTCTGGCCAGGGATTCTAATGCCTCAGGATCCATGGTAGCTCTCACCTCTT
GCCTGGGGACTCTTGGAGAGTCAGGAGCTCAGAAGCCCCTAAGATTGTCAGATGTTTTACTAAT
AGATCACCCCTGCTAGATAGGTTCTAGCAATTCCCTTAGGGGAGTGTGGTGGCCATAGGCCCTC
TTGACTTTCAGAAAGCCTGAACCCCAGTGATTGGTAACTTTCACTCTATTCCTAGTGAAGCCTT
GTGACCCTCTTCCTGAAGTCTGTCCCCTAATGACAGGGAGCTAGCTGCAGTGGCCCTGCCCTAC
AGGTGTGGCCAGGCACACCAGCTGGAGAGGCGGTACTGGGTACTGTAGGATCTGCACTGATGAC
CTTGCAGAGGAGGCTCTTTGCTGCACCACTGTTGTGTCAGGTGCTTCAAGTGCTGCTGTCAGTC
CCCAGCCTTATACCTGCCCAGCCTGGGCCTTTGCTTCTGTCCACTCTGGTGTCGAGTGTCGCTA
CACTCCACTTACTGAGGGCCATCCGGACCTCTTTTGTCTTTCTCTTGCCCCTGCCCTGTCAGTC
TGTGGCTGGGGGTGCTTTTACTGTGAATCCAGTGTTCACATTTACCACAATTTCCTTGGCACCA
ATCATGTATTTTACCGTTTGCACTTTTTGTATTTCAATAAAAATGTAAATGAAAAATGCC

hide sequence

RefSeq Acc Id:

XM_039104900 ⟹ XP_038960828

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,064 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,621,377 - 77,643,398 (+)	NCBI

RefSeq Acc Id:

XM_039104901 ⟹ XP_038960829

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	3	98,077,471 - 98,099,159 (+)	NCBI
mRatBN7.2	3	77,621,780 - 77,643,400 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101217	(Get FASTA)	NCBI Sequence Viewer
	XP_006234613	(Get FASTA)	NCBI Sequence Viewer
	XP_006234614	(Get FASTA)	NCBI Sequence Viewer
	XP_006234615	(Get FASTA)	NCBI Sequence Viewer
	XP_006234616	(Get FASTA)	NCBI Sequence Viewer
	XP_006234618	(Get FASTA)	NCBI Sequence Viewer
	XP_006234619	(Get FASTA)	NCBI Sequence Viewer
	XP_006234620	(Get FASTA)	NCBI Sequence Viewer
	XP_006234621	(Get FASTA)	NCBI Sequence Viewer
	XP_006234622	(Get FASTA)	NCBI Sequence Viewer
	XP_017447205	(Get FASTA)	NCBI Sequence Viewer
	XP_038960828	(Get FASTA)	NCBI Sequence Viewer
	XP_038960829	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL79535	(Get FASTA)	NCBI Sequence Viewer
	EDL79536	(Get FASTA)	NCBI Sequence Viewer
	EDL79537	(Get FASTA)	NCBI Sequence Viewer
	EDL79538	(Get FASTA)	NCBI Sequence Viewer
	EDL79539	(Get FASTA)	NCBI Sequence Viewer
	EDL79540	(Get FASTA)	NCBI Sequence Viewer
	EDL79541	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000059324
	ENSRNOP00000059324.1
	ENSRNOP00000070761
	ENSRNOP00000070761.3
	ENSRNOP00000087093.1

RefSeq Acc Id:

NP_001101217 ⟸ NM_001107747

- UniProtKB:

D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPY
YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHG
LTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYL
SELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQ
EPIPIVLRETVAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKT
FLRELPEPLLTFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQ
NRMNNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV

hide sequence

RefSeq Acc Id:	XP_006234622 ⟸ XM_006234560
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPY YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHG LTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYL SELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQ EPIPIVLRETVAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKT FLRELPEPLLTFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQ NRMNNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV hide sequence

RefSeq Acc Id:	XP_006234616 ⟸ XM_006234554
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPY YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHG LTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYL SELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQ EPIPIVLRETVAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKT FLRELPEPLLTFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQ NRMNNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV hide sequence

RefSeq Acc Id:	XP_006234613 ⟸ XM_006234551
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPY YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHG LTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYL SELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQ EPIPIVLRETVAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKT FLRELPEPLLTFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQ NRMNNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV hide sequence

RefSeq Acc Id:	XP_006234618 ⟸ XM_006234556
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPY YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHG LTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYL SELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQ EPIPIVLRETVAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKT FLRELPEPLLTFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQ NRMNNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV hide sequence

RefSeq Acc Id:	XP_006234614 ⟸ XM_006234552
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPY YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHG LTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYL SELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQ EPIPIVLRETVAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKT FLRELPEPLLTFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQ NRMNNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV hide sequence

RefSeq Acc Id:	XP_006234619 ⟸ XM_006234557
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPY YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHG LTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYL SELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQ EPIPIVLRETVAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKT FLRELPEPLLTFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQ NRMNNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV hide sequence

RefSeq Acc Id:	XP_006234620 ⟸ XM_006234558
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPY YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHG LTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYL SELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQ EPIPIVLRETVAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKT FLRELPEPLLTFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQ NRMNNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV hide sequence

RefSeq Acc Id:	XP_006234615 ⟸ XM_006234553
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPY YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHG LTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYL SELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQ EPIPIVLRETVAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKT FLRELPEPLLTFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQ NRMNNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV hide sequence

RefSeq Acc Id:	XP_006234621 ⟸ XM_006234559
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6A7T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHGLTSDNKPSLS WLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYLSELSEHVKLE QLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQEPIPIVLRET VAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKTFLRELPEPLL TFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQNRMNNTNLAV VFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV hide sequence

RefSeq Acc Id:	XP_017447205 ⟸ XM_017591716
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDPLSELQDDLTLDDTSQALNQLKLASIDEKNWPSDEMPDFPKSDDSKSSSPEPVTHLKWDDPY YDIARHQIVEVAGDDKYGRKIIVFSACRMPPSHQLDHSKLLGYLKHTLDQYVESDYTLLYLHHG LTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGRKIFYVNYL SELSEHVKLEQLGIPRQVLKYDDFLKSTQKSPATAPKPMPPRPPLPNQQFGVSLQHLREKNPNQ EPIPIVLRETVAYLQAHALTAEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELHLPAVILKT FLRELPEPLLTFDLYPHIVGFLDLDDDQRVEVTQQVLQTLPEENYRVLHFLTAFLVQVSAHSYQ NRMNNTNLAVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSTDAQGV hide sequence

Ensembl Acc Id:

ENSRNOP00000059324 ⟸ ENSRNOT00000067318

Ensembl Acc Id:

ENSRNOP00000070761 ⟸ ENSRNOT00000079118

RefSeq Acc Id:	XP_038960828 ⟸ XM_039104900
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960829 ⟸ XM_039104901
- Peptide Label:	isoform X1
- UniProtKB:	D4A6C5 (UniProtKB/TrEMBL), A0A8I6A7T6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000087093 ⟸ ENSRNOT00000098688

Protein Domains

Rho-GAP

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A6C5-F1-model_v2	AlphaFold	D4A6C5	1-439	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13692217

Promoter ID:

EPDNEW_R2741

Type:

initiation region

Name:

Arhgap1_1

Description:

Rho GTPase activating protein 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	3	80,555,283 - 80,555,343	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306068	AgrOrtholog
BioCyc Gene	G2FUF-48722	BioCyc
Ensembl Genes	ENSRNOG00000016610	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000067318	ENTREZGENE
	ENSRNOT00000067318.5	UniProtKB/TrEMBL
	ENSRNOT00000079118	ENTREZGENE
	ENSRNOT00000079118.3	UniProtKB/TrEMBL
	ENSRNOT00000098688.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.555.10	UniProtKB/TrEMBL
	3.40.525.10	UniProtKB/TrEMBL
InterPro	ARHGAP1_RhoGAP	UniProtKB/TrEMBL
	CRAL-bd_TRIO_C	UniProtKB/TrEMBL
	CRAL-TRIO_dom_sf	UniProtKB/TrEMBL
	Rho_GTPase_activation_prot	UniProtKB/TrEMBL
	RhoGAP	UniProtKB/TrEMBL
KEGG Report	rno:311193	UniProtKB/TrEMBL
NCBI Gene	311193	ENTREZGENE
PANTHER	RHO GTPASE-ACTIVATING PROTEIN 1	UniProtKB/TrEMBL
	RHO GTPASE-ACTIVATING PROTEIN 68F	UniProtKB/TrEMBL
Pfam	CRAL_TRIO_2	UniProtKB/TrEMBL
	RhoGAP	UniProtKB/TrEMBL
PhenoGen	Arhgap1	PhenoGen
PROSITE	CRAL_TRIO	UniProtKB/TrEMBL
	RHOGAP	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000016610	RatGTEx
SMART	RhoGAP	UniProtKB/TrEMBL
	SEC14	UniProtKB/TrEMBL
Superfamily-SCOP	CRAL_TRIO_C	UniProtKB/TrEMBL
	Rho_GAP	UniProtKB/TrEMBL
UniProt	A0A0G2JYR5_RAT	UniProtKB/TrEMBL
	A0A8I6A7T6	ENTREZGENE, UniProtKB/TrEMBL
	D4A6C5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Arhgap1	Rho GTPase activating protein 1	Arhgap1_predicted	Rho GTPase activating protein 1 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Arhgap1_predicted	Rho GTPase activating protein 1 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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