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Gene: Zfpm2 (zinc finger protein, multitype 2) Rattus norvegicus

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Symbol:

Zfpm2

Name:

zinc finger protein, multitype 2

RGD ID:

1306021

Description:

Predicted to enable RNA polymerase II-specific DNA-binding transcription factor binding activity; transcription coactivator activity; and transcription corepressor activity. Predicted to be involved in several processes, including cardiac chamber morphogenesis; positive regulation of cardiac muscle cell proliferation; and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including circulatory system development; in utero embryonic development; and lung development. Predicted to be located in cytoplasm and male germ cell nucleus. Predicted to be active in nucleus. Human ortholog(s) of this gene implicated in 46,XY sex reversal 9; congenital diaphragmatic hernia; myelodysplastic syndrome; and tetralogy of Fallot. Orthologous to human ZFPM2 (zinc finger protein, FOG family member 2); INTERACTS WITH 6-propyl-2-thiouracil; acetamide; acrylamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

FOG-2; zinc finger protein ZFPM2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	73,563,732 - 74,001,041 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	73,563,732 - 74,001,041 (+)	Ensembl				GRCr8
mRatBN7.2	7	71,678,658 - 72,116,209 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	71,678,880 - 72,116,205 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	73,563,335 - 73,995,149 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	75,765,841 - 76,197,677 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	75,633,940 - 76,065,769 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	79,471,277 - 79,964,405 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	79,638,046 - 79,964,405 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	79,491,886 - 79,976,680 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	76,210,472 - 76,654,443 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	68,728,223 - 69,158,299 (+)	NCBI		Celera
RGSC_v3.1	7	76,324,843 - 76,675,169 (+)	NCBI
Cytogenetic Map	7	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

46,XY sex reversal 3 (ISO)

46,XY sex reversal 9 (ISO)

atrial heart septal defect (ISO)

cardiomyopathy (ISO)

congenital diaphragmatic hernia (ISS)

congestive heart failure (ISO)

Diaphragmatic Hernia (ISO)

Diaphragmatic Hernia 3 (ISO)

dilated cardiomyopathy (ISO)

double outlet right ventricle (ISO)

genetic disease (ISO)

myelodysplastic syndrome (ISO)

Perinatal Death (ISO)

tetralogy of Fallot (ISO,ISS)

tricuspid atresia (ISO,ISS)

Venous Thromboembolism (ISO)

ventricular septal defect (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2-palmitoylglycerol (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

alpha-Zearalanol (EXP)

antirheumatic drug (ISO)

aristolochic acid A (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

CGP 52608 (ISO)

cocaine (EXP)

cyclosporin A (ISO)

cytarabine (ISO)

DDT (ISO)

diarsenic trioxide (ISO)

dimethylarsinic acid (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

fenvalerate (EXP)

folic acid (ISO)

formaldehyde (ISO)

fulvestrant (ISO)

genistein (ISO)

glufosinate (ISO)

malathion (ISO)

methylmercury chloride (ISO)

N-ethyl-N-nitrosourea (ISO)

nickel atom (ISO)

nickel dichloride (ISO)

p-chloromercuribenzoic acid (ISO)

paracetamol (ISO)

perfluorooctanoic acid (EXP)

phenylephrine (EXP,ISO)

phenylmercury acetate (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

Soman (EXP)

testosterone (ISO)

tetrachloromethane (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

anatomical structure morphogenesis (IEA)

biological_process (ND)

cardiac muscle tissue development (ISO)

cardiac muscle tissue morphogenesis (IEA)

cell differentiation (IBA,IEA)

DNA-templated transcription (IEA)

embryonic organ development (ISO)

fat cell differentiation (IEA,ISO)

heart development (IBA,ISO)

in utero embryonic development (ISO)

lung development (ISO)

mitral valve formation (IEA)

negative regulation of DNA-templated transcription (IEA,ISO)

negative regulation of fat cell differentiation (IEA,ISO)

negative regulation of female gonad development (IEA,ISO)

negative regulation of transcription by RNA polymerase II (IBA,IEA,ISO)

outflow tract morphogenesis (IEA)

outflow tract septum morphogenesis (IEA,ISO)

positive regulation of cardiac muscle cell proliferation (IEA,ISO)

positive regulation of DNA-templated transcription (IEA,ISO)

positive regulation of macromolecule biosynthetic process (IEA)

positive regulation of male gonad development (IEA,ISO)

positive regulation of transcription by RNA polymerase II (IBA,IEA,ISO)

regulation of transcription by RNA polymerase II (IEA)

right ventricular cardiac muscle tissue morphogenesis (IEA,ISO)

tricuspid valve formation (IEA)

vasculogenesis (ISO)

ventricular septum morphogenesis (IEA,ISO)

Cellular Component

cytoplasm (IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IBA,IEA,ISO)

Molecular Function

DNA binding (IEA)

metal ion binding (IEA)

protein binding (IPI,ISO)

RNA polymerase II-specific DNA-binding transcription factor binding (IBA,IEA,ISO)

transcription coactivator activity (IEA,ISO)

transcription corepressor activity (IBA,IEA,ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	AML1-FOG2 fusion protein in myelodysplasia.	Chan EM, etal., Blood. 2005 Jun 1;105(11):4523-6. Epub 2005 Feb 10.
2.	Retinoid X receptor alpha represses GATA-4-mediated transcription via a retinoid-dependent interaction with the cardiac-enriched repressor FOG-2.	Clabby ML, etal., J Biol Chem 2003 Feb 21;278(8):5760-7.
3.	FOG-2 mediated recruitment of the NuRD complex regulates cardiomyocyte proliferation during heart development.	Garnatz AS, etal., Dev Biol. 2014 Nov 1;395(1):50-61. doi: 10.1016/j.ydbio.2014.08.030. Epub 2014 Sep 6.
4.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5.	Genetic Analysis of Venous Thromboembolism in UK Biobank Identifies the ZFPM2 Locus and Implicates Obesity as a Causal Risk Factor.	Klarin D, etal., Circ Cardiovasc Genet. 2017 Apr;10(2):e001643. doi: 10.1161/CIRCGENETICS.116.001643.
6.	Mutation within the hinge region of the transcription factor Nr2f2 attenuates salt-sensitive hypertension.	Kumarasamy S, etal., Nat Commun. 2015 Feb 17;6:6252. doi: 10.1038/ncomms7252.
7.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
8.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
9.	Mutations of ZFPM2/FOG2 gene in sporadic cases of tetralogy of Fallot.	Pizzuti A, etal., Hum Mutat. 2003 Nov;22(5):372-7.
10.	GOA pipeline	RGD automated data pipeline
11.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
13.	Comprehensive gene review and curation	RGD comprehensive gene curation
14.	The zinc finger and C-terminal domains of MTA proteins are required for FOG-2-mediated transcriptional repression via the NuRD complex.	Roche AE, etal., J Mol Cell Cardiol. 2008 Feb;44(2):352-60. Epub 2007 Nov 12.
15.	Increased FOG-2 in failing myocardium disrupts thyroid hormone-dependent SERCA2 gene transcription.	Rouf R, etal., Circ Res. 2008 Aug 29;103(5):493-501. doi: 10.1161/CIRCRESAHA.108.181487. Epub 2008 Jul 25.
16.	CpG island shore methylation of ZFPM2 is identified in tetralogy of fallot samples.	Sheng W, etal., Pediatr Res. 2016 Jul;80(1):151-8. doi: 10.1038/pr.2016.42. Epub 2016 Mar 9.
17.	A syndrome of tricuspid atresia in mice with a targeted mutation of the gene encoding Fog-2.	Svensson EC, etal., Nat Genet. 2000 Jul;25(3):353-6. doi: 10.1038/77146.

Additional References at PubMed

PMID:9927675	PMID:10225993	PMID:10438528	PMID:10892744	PMID:12213678	PMID:12606418	PMID:15220332	PMID:15766748	PMID:16103912	PMID:17445768	PMID:19301398	PMID:20206639
PMID:20705609	PMID:20807224	PMID:22267003

Genomics

Comparative Map Data

Zfpm2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	73,563,732 - 74,001,041 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	73,563,732 - 74,001,041 (+)	Ensembl				GRCr8
mRatBN7.2	7	71,678,658 - 72,116,209 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	71,678,880 - 72,116,205 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	73,563,335 - 73,995,149 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	75,765,841 - 76,197,677 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	75,633,940 - 76,065,769 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	79,471,277 - 79,964,405 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	79,638,046 - 79,964,405 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	79,491,886 - 79,976,680 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	76,210,472 - 76,654,443 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	68,728,223 - 69,158,299 (+)	NCBI		Celera
RGSC_v3.1	7	76,324,843 - 76,675,169 (+)	NCBI
Cytogenetic Map	7	q31	NCBI

ZFPM2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	105,318,438 - 105,804,539 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	104,590,733 - 105,804,539 (+)	Ensembl			hg38	GRCh38
GRCh37	8	106,330,666 - 106,816,767 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	106,400,323 - 106,885,943 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	8	106,400,322 - 106,885,941	NCBI
Celera	8	102,518,281 - 103,003,726 (+)	NCBI		Celera
Cytogenetic Map	8	q23.1	NCBI
HuRef	8	101,532,803 - 102,138,045 (+)	NCBI		HuRef
CHM1_1	8	106,371,762 - 106,857,264 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	8	106,445,857 - 106,932,108 (+)	NCBI		T2T-CHM13v2.0

Zfpm2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	40,518,438 - 40,967,988 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	40,518,431 - 40,967,988 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	40,655,042 - 41,104,592 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	40,655,035 - 41,104,592 (+)	Ensembl			mm10	GRCm38
MGSCv37	15	40,486,588 - 40,936,138 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	40,485,116 - 40,934,666 (+)	NCBI		MGSCv36	mm8
Celera	15	41,140,194 - 41,582,164 (+)	NCBI		Celera
Cytogenetic Map	15	B3.1	NCBI
cM Map	15	15.74	NCBI

Zfpm2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955417	28,920,210 - 29,269,271 (+)	Ensembl
ChiLan1.0	NW_004955417	28,931,428 - 29,268,778 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZFPM2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	122,596,111 - 123,154,098 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	98,118,921 - 98,676,812 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	101,872,850 - 102,430,622 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	104,193,343 - 104,577,698 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	104,023,062 - 104,576,688 (+)	Ensembl			panPan2	panpan1.1

ZFPM2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	6,435,368 - 6,796,903 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	6,336,794 - 6,796,322 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	6,442,921 - 6,803,153 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	6,588,050 - 7,045,717 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	6,587,518 - 7,044,757 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	6,451,443 - 6,811,875 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	6,571,226 - 6,931,950 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	6,646,836 - 7,007,257 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Zfpm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	31,006,795 - 31,431,557 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936470	38,432,897 - 38,857,662 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936470	38,432,894 - 38,857,656 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZFPM2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	31,606,773 - 32,094,287 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	4	31,607,968 - 31,996,226 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	34,232,973 - 34,242,599 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Sscrofa10.2	4	34,441,657 - 34,641,574 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZFPM2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	100,138,867 - 100,620,355 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666039	39,958,226 - 40,438,731 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zfpm2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624763	21,388,244 - 21,707,953 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624763	21,388,060 - 21,708,969 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Zfpm2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	214,333,917 - 214,343,557 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Zfpm2
3102 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	199
Count of miRNA genes:	114
Interacting mature miRNAs:	150
Transcripts:	ENSRNOT00000029419
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
10053722	Scort27	Serum corticosterone level QTL 27	2.41	0.0083	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	45113903	90113903	Rat
2317035	Aia16	Adjuvant induced arthritis QTL 16	2.71		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	7	71103011	106126789	Rat
1300127	Srn1	Serum renin concentration QTL 1	3.87		blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	7	24179478	86817926	Rat
1357336	Gluco6	Glucose level QTL 6	3.4		blood glucose amount (VT:0000188)	serum glucose level (CMO:0000543)	7	51700643	96700643	Rat
1358361	Sradr5	Stress Responsive Adrenal Weight QTL 5	5.55		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	7	31770293	110435881	Rat
1298525	Cm1	Cardiac mass QTL 1	2.7		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	7	56625161	101625161	Rat
1357338	Stl17	Serum triglyceride level QTL 17	3.23		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	71621154	114982716	Rat
70159	Bp61	Blood pressure QTL 61		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	73618702	118618702	Rat
631513	Scl7	Serum cholesterol level QTL 7	4.1		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	39845902	84845902	Rat
10755453	Coatc12	Coat color QTL 12		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	32998702	77998702	Rat
631504	Cm27	Cardiac mass QTL 27	3.45		heart left ventricle mass (VT:0007031)	heart left ventricle wet weight (CMO:0000071)	7	46307490	127866166	Rat
7411605	Foco14	Food consumption QTL 14	24.1	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	7	36178764	81178764	Rat
1300151	Bp181	Blood pressure QTL 181	3.36		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	7	55498584	105834451	Rat
1559283	Emca4	Estrogen-induced mammary cancer QTL 4	3.7		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	7	63889858	108889858	Rat
1643004	Pain2	Pain QTL 2	1		mechanical nociception trait (VT:0002734)	self mutilation severity score (CMO:0002145)	7	10112916	99900612	Rat
738030	Anxrr8	Anxiety related response QTL 8	4.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	48475049	93475049	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	1	104117804	Rat
631534	Lnnr1	Liver neoplastic nodule remodeling QTL 1	3.85	0.001	liver integrity trait (VT:0010547)	liver remodeling tumorous lesion number to liver total tumorous lesion number ratio (CMO:0001705)	7	36178764	81178764	Rat
631201	Panci1	Pancreas inflammation QTL 1	0	0.001	pancreas integrity trait (VT:0010560)	percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)	7	73557047	118557047	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	1509236	116977875	Rat
61357	Bp38	Blood pressure QTL 38	1.6	0.052	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	40540077	123682549	Rat
2316947	Rf58	Renal function QTL 58	7.8		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	7	49682832	115766396	Rat
10450862	Kidm55	Kidney mass QTL 55	4.9		kidney mass (VT:0002707)	kidney weight (CMO:0000081)	7	72725037	117725037	Rat
1298528	Bp169	Blood pressure QTL 169		0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	62963207	107963207	Rat
1300132	Bp182	Blood pressure QTL 182	3.49		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	21541977	86817926	Rat
1576303	Ept7	Estrogen-induced pituitary tumorigenesis QTL 7	3.7		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	7	63889858	108889858	Rat
10450856	Livw4	Liver weight QTL 4	3.8		liver mass (VT:0003402)	liver weight (CMO:0000092)	7	72725037	117725037	Rat
2316955	Stl24	Serum triglyceride level QTL 24	7.1		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	7	49682832	115766396	Rat
2316952	Pur22	Proteinuria QTL 22	5.2		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	7	49682832	115766396	Rat
2303582	Gluco53	Glucose level QTL 53	3		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	7	48603087	93603087	Rat
631540	Bw9	Body weight QTL 9	4.5		body mass (VT:0001259)	body weight (CMO:0000012)	7	71621154	119349044	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	71827901	136544683	Rat

Markers in Region

D7Rat22

Rat Assembly	Chr	Position (strand)	Source	JBrowse
RGSC_v3.4	7	76,615,342 - 76,615,501	UniSTS	RGSC3.4
RGSC_v3.4	7	76,615,341 - 76,615,501	RGD	RGSC3.4
Celera	7	69,120,095 - 69,120,250	UniSTS
RGSC_v3.1	7	76,636,071 - 76,636,231	RGD
RH 3.4 Map	7	620.3	RGD
RH 3.4 Map	7	620.3	UniSTS
RH 2.0 Map	7	478.6	RGD
SHRSP x BN Map	7	45.53	RGD
FHH x ACI Map	7	36.75	RGD
Cytogenetic Map	7	q22-q31	UniSTS

D7Rat142

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	71,788,963 - 71,789,091 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	79,629,118 - 79,629,245	NCBI	Rnor6.0
Rnor_5.0	7	79,648,702 - 79,648,829	UniSTS	Rnor5.0
RGSC_v3.4	7	76,323,357 - 76,323,874	RGD	RGSC3.4
RGSC_v3.4	7	76,323,578 - 76,323,705	UniSTS	RGSC3.4
Celera	7	68,837,793 - 68,837,920	UniSTS
RGSC_v3.1	7	76,344,308 - 76,344,435	RGD
RH 3.4 Map	7	621.8	UniSTS
RH 3.4 Map	7	621.8	RGD
SHRSP x BN Map	7	45.53	UniSTS
SHRSP x BN Map	7	45.53	RGD
Cytogenetic Map	7	q22-q31	UniSTS

D7Got234

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	71,906,963 - 71,907,149 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	79,745,450 - 79,745,635	NCBI	Rnor6.0
Rnor_5.0	7	79,765,034 - 79,765,219	UniSTS	Rnor5.0
RGSC_v3.4	7	76,442,431 - 76,442,616	UniSTS	RGSC3.4
Celera	7	68,949,245 - 68,949,428	UniSTS
Cytogenetic Map	7	q22-q31	UniSTS

AW532229

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	71,806,271 - 71,806,429 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	79,646,431 - 79,646,589	NCBI	Rnor6.0
Rnor_5.0	7	79,666,015 - 79,666,173	UniSTS	Rnor5.0
RGSC_v3.4	7	76,340,888 - 76,341,045	UniSTS	RGSC3.4
Celera	7	68,855,075 - 68,855,232	UniSTS
RH 3.4 Map	7	621.5	UniSTS
Cytogenetic Map	7	q22-q31	UniSTS

PMC303372P1

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	72,115,403 - 72,115,888 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	79,963,604 - 79,964,088	NCBI	Rnor6.0
Rnor_5.0	7	79,975,879 - 79,976,363	UniSTS	Rnor5.0
RGSC_v3.4	7	76,653,642 - 76,654,126	UniSTS	RGSC3.4
Celera	7	69,157,498 - 69,157,982	UniSTS
Cytogenetic Map	7	q22-q31	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	145	91	90	59	28	59	6	272	128	11	124	61	92	31	15	15

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001130501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079162	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000029419 ⟹ ENSRNOP00000035072

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	73,563,732 - 74,001,041 (+)	Ensembl
mRatBN7.2 Ensembl	7	71,678,880 - 72,116,205 (+)	Ensembl
Rnor_6.0 Ensembl	7	79,638,046 - 79,964,405 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000121714 ⟹ ENSRNOP00000104529

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	73,564,045 - 74,001,041 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000128336 ⟹ ENSRNOP00000099393

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	73,845,360 - 74,001,041 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000171636 ⟹ ENSRNOP00000103913

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	73,563,734 - 74,001,036 (+)	Ensembl

RefSeq Acc Id:

NM_001130501 ⟹ NP_001123973

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	73,563,732 - 74,001,041 (+)	NCBI
mRatBN7.2	7	71,678,880 - 72,116,205 (+)	NCBI
Rnor_6.0	7	79,471,277 - 79,964,405 (+)	NCBI
Rnor_5.0	7	79,491,886 - 79,976,680 (+)	NCBI
RGSC_v3.4	7	76,210,472 - 76,654,443 (+)	RGD
Celera	7	68,728,223 - 69,158,299 (+)	RGD

Sequence:

show sequence

GCAGTGCGAGCGCGGCGCGGCCCGGAGCGGCAGCGGCGGCGCCTGAGTCTCTGCCCGGCAGCCG
GGGACACGGGGAGCGAGTGCGCGCCTCCTCCTGCACCCTCCGCCCCTCGCAGCCCCGGTCCCCC
TGCGCGCTCTCCTTCCCTCCCTCCTTCTCTTCCTTCTCTTACCCCACCACCCCCTTCTTCCCCT
TTTCTCTCTGCCTGGCCGATCGCTCCTAGATTCCCATCCTCCCCCCAAAAGCCCCATCGCTCTC
CCCGTCGCCCCCTCCCCTCTTCTCTGTCACACTCTCTCTGGCCCTTCGCTCGGCCTCTCATTTG
CTTGCTCATCTCCAAACGTGGATCCGCGGCTCCCGGAGGAGCCTAGCTCCGGGATCCCGCGCGC
ACGGAGCACCTGGAGTCCGGCCGGCGGCGGCCCGAGCCTGGCCAGAGGCAGAGGCAGCGACAAC
CCAGGGAACGGTAGCAGGGACCGCGGACACCGCAGGAACCCCAGCGGCAGCGGCCGCGGCCGAG
ATGTCCCGGCGAAAGCAGAGTAAACCCCGGCAGATCAAACGGCCGCTGGAAGATGCCATCGAAG
ATGAGGAAGAAGAGTGTCCCGTAGAGGAGGCTGACGTCATCGCGAAAGGAGACTTTCCATTGGA
GGAAAGCTTCCCCACAGGCTTCGAGTCAGAAAATCTGAGCTGTGAAGAAGTGGAGTTCTTTTGT
AACAAAGGTGATGACGAAGGAATCCAGGAGCCAGCAGAATCAGATGGGGACAGCCATTCAGACA
AACCGGGGCAGCCTGGAGTAGAGACAGATGACTGGGATGGACCAGGAGAGCTAGAAGTATTTCA
GAGAGATGGGGAAAGGAAGATTCAGAGTCGGCAGCAGCTTCCGGTGGGAACAACCTGGGGCCCT
TTCGCTGGGAAGATGGACTTGAACAATAATTCCTTGAAGACGAAGGCTCAGGTCTCCATGGTGC
TGACTGCTGGTCCCAAGTGGCTTCTGGATGTGACTTGGCAAGGAGTGGAGGACAGCAAAAACAA
CTGCATTGTGTACAGCAAAGGGGGTCAGCTTTGGTGCACCACGACGAAGGCCATCTCGGAGGGT
GAAGAACTAATTGCCTTTGTGGTGGACTTTGACTCAAGGCTACAAACTGCTAGCCAGATGACTC
TCACAGAAGGGATGTACCCGGCCCGCCTGCTGGACTCAATTCAGCTGCTTCCTCAGCAAGCTGC
CATGGCTTCTATTTTGCCTACAGCTATTGTCAATAAGGATATATTCCCTTGCAAGTCCTGTGGC
ATTTGGTACCGGAGCGAGCGGAACCTGCAAGCCCATTTGATGTACTACTGTAGTGGGAGGCAAA
GAGAAGCTGCTCCAGTGTCTGAAGAAAATGAAGACAGTACGCATCAGATTTCCAGCCTGTGCCC
CTTCCCACAATGCACCAAGAGCTTTTCCAATGCCCGAGCTCTAGAAATGCACCTGACTTCACAC
AGTGGAGTGAAAATGGAAGAGTTCCTGCCTCCCGGGGCGAGTTTGAAATGCACGGTGTGTAGCT
ACACTGCTGATTCCGTGATCAACTTCCACCAACACCTGTTCTCGCATCTCACTCAAGCTGCCTT
CCGTTGCAACCACTGCCATTTTGGCTTCCAGACCCAAAGGGAGTTACTGCAGCACCAGGAGCTC
CATGTCCCCGGTGGCAAACTTCCCAGAGAAAGCGACATGGAGCACTCTCCAAGTGGAACAGAAG
ACAGCTTACAGCCAGCCACAGACTTGTTGGCCAGAAGTGACCTCTCCCAGAGCCAAAAGGCCAT
GCCGACTAAAGATGCAAGCTCAGACACAGAGCTGGACAAGTGTGAGAAAAAGACTCAACTCTTT
CTCACCAATCAGAGACCAGAGATGCAGCCTGCGGCAAACAAGCAGAACTTCTCTTACACAAAAA
TAAAGTCTGAGCCTTCCAGCCCCAGACTTGCCTCATCTCCAGTGCAACCCAACCTAGGGCCCTC
TTTCCCTGTGGGACCTTTCCTGTCTCAGTTTGCTTTCCCCCAAGATATCACCATGGTCCCTCAA
GCTTCAGAGATCTTAGCCAAGATGTCCGAGCTGGTGCACCGACGCCTGAGGCACGGGAGTAGTA
GCTACCCTCCTGTAATTTACAGCCCTTTGATGCCCAAAGGGGCTACATGCTTTGAGTGTAACAT
AACGTTCAATAATCTGGATAACTATCTAGTTCATAAAAAACACTACTGCAGCAGCCGATGGCAG
CAGATGGCCAAATCCCCTGAGTTTCCAAGTGTTTCTGAAAAGATACCGGAAGCTCTGAGTCCTA
ACACTGGCCAGACTTCCATAAACCTTCTCAACCCGGCGGCTCATCCACCGGACCCGGAGAATCC
ACTTCTTCAAACATCCTGCATCAACTCTTCCACGGTTTTAGATTTGATTGGGCCAAACGGAAAG
GGCCATGAGAAGGACTTTTCCACTCAAGCCAAAAAGTTGCCCACCTCCAACAACAATGACGACA
AAATAAATGGAAAGCCCGTTGATGTGAAAAATCCCAGCGGCCCCTTAGTGGATGGGGAAAGTGA
CCCAAATAAGACTACCTGTGAAGCTTGTAACATCACCTTCAGCAGGCATGAAACCTATATGGTC
CACAAACAGTATTACTGTGCAACGCGCCATGACCCTCCGCTAAAGAGGTCTGCTTCCAACAAAG
TGCCGGCCATGCAGAGAACCATGCGCACACGCAAGCGAAGAAAGATGTACGAAATGTGCCTACC
CGAGCAAGAGCAACGGCCACCCCTAGTTCAGCAGAGATTTCTTGATGTAGCCAACCTCAGCAAT
CCTTGTAGCTCCACTCAAGAGCCCACTGAAGGGCTAGGAGAATGCTACCACCCGAGATGCGACA
TCTTCCCAGGAATTGTCTCAAAGCACTTGGAAACATCGTTGGCCATAAACAAATGTGTTCCGGT
TCCCAAATGTGATACAACTCATTCCAGTGTTTCCTGCCTGGAGATGGACGTCCCCATAGATCTC
AGCAAAAAGTGTTTATCGCAGTCTGAGCGGACGACAGCATCTCCTAAAAGGCTACTAGACTACC
ACGAGTGCACCGTGTGCAAGATCAGCTTCAATAAGGTCGAGAACTACCTGGCCCACAAGCAGAA
TTTCTGCCCTGTCACTGCACATCAACGCAACGACCTAGGTCAGCTTGATGGCAAAGTGTTTCCG
AATCCAGAAAGTGAACGGAACAGCCCGGAAGTCAGCTTTGAAAGAAACATGATCAAATGTGAGA
AGAATGGGAATCCGAAGCAGCCTTCTCCCAACGGAAACTTGTTTTCATCCCATTTGGCAACCTT
GCAAGGCCTGAAAGTCTTCAGTGAGGCGGCTCAGCTCATTGCTACAAAAGAAGAAAACAAACAT
TTGTTTCTTCCCCAATGCCTTTACCCTGGAGCAATAAAGAAGACGAAAGGAGCCGACCAGCTTT
CTCCATACTATGGCATAAAGCCAAGCGATTATATCGCCGGTTCTCTTGTCATCCACAACACCGA
CGTCGAACAGAACACAAACACAGAAAACGAGTCTCCTAAAGGCCAGGCCTCCTCAAATGGGTGT
GCGGTACCCAAGAAAGATTCTCTGCCATTGTTGCCCAAAAACAGAGGCATGGTCATAGTGAATG
GTGGACTGAAGCAAGATGAAAGGCCTACCGCAAACCCACAGCAAGAGAACATTTCCCAGAATGC
CCAGCACGAAGACGGCCACAAATCCCCTTCGTGGATCTCTGAGAACCCGTTAGCTGCAAATGAG
AATGTCTCCCCAGGAATTCCCTGCGCAGAAGAACAGTTGTCTAGCATAGCAAAAGGTGTGAATG
GCTCTACCCAGGCCCCCAGCAGTGGGAAATACTGCCGGCTATGCGATATCCAGTTCAATAACCT
TTCAAACTTTATAACTCACAAGAAGTTTTATTGCTCATCACATGCAGCAGAACATGTCAAATGA
ACTAACTGAGTAACTAAAGAAAGCAGTCACCTTTGGTACCGTGTTTAGTATGTTCTTCTAAACA
GTCCAGAAAACAAAGAAGCTGTTTGAATTACATCTGCCGATCAGGAGATAATTCATAATGGCTG
AGTTGAAGACTTGGTGTAATTTCATTACAGACCATTAGTAAAGTGTATTATTGGTGCCATTTTC
AGAAAAAAAATTAATTTATTTTACCAGCAGTATTCATAGCTGTGGTTATGTTATTTTTATTTAA
AAACTTTATATTAAAGTCATTTGTAATGTTATTGTATAGTTATTGTGTAGCACATATGGTTTGC
ACTGTATAGTAGCTTTTAAAGAAAATAGTCACAAACAATACAGAAGAGCATTTTAGAAATAGCT
TCAAAAGCACTTGTGTATCCTGATTTTTTTTCTTATATGCTGTTGCAGATATACGTATATGCTA
AAATATAACCTGCAAACATGTTCTAAATACACATGCTGTAAGTTCGCCTTAAGGTTTCGATTCT
CGGCTAATCAGGCCCCAGTTGCACTTTATATTTTAGCAAATACAGTCCCTTAGTCTCTAGGCTT
TGCATTTGTATGTAGCCGTATATTTCCGTCCATTTCCTCAGACTGAAACATGTATGTTAAACGA
AGATGGCAATTTTTTCTTGTATAGTACTTGTATTTTCTTTCGCCGATGCAGCCCTGTCCCAATT
TTTAAACCTTGGCTGTTAAATGCAATACTTTATAAAGAATGAACAAAATTACTGGAAGCAGTAT
TGTAAGGATCGGAGTAGTGGTAATCAGTTTTATCTTTCGAAAGGCACAGTCTAAATCGAACCCC
TAAACTCAATGCTGCAAGTATGAATTTAATTCATATATAAGATCTATTTAAATATAAGAGTAGC
AATACTGCACCTGGTGATCACAAAGATAATGTTCTACTTCTGATAGAAAATAATTTCTCAACAA
ATGTTGTTACTATGCATGTACATGGATGGAATAAAATTCCAAATTGTTGGAGATGTT

hide sequence

RefSeq Acc Id:

XM_039079162 ⟹ XP_038935090

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	73,564,151 - 74,001,035 (+)	NCBI
mRatBN7.2	7	71,678,658 - 72,116,209 (+)	NCBI

RefSeq Acc Id:

XM_039079163 ⟹ XP_038935091

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	73,845,276 - 74,001,035 (+)	NCBI
mRatBN7.2	7	71,959,241 - 72,116,209 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001123973	(Get FASTA)	NCBI Sequence Viewer
	NP_001421508	(Get FASTA)	NCBI Sequence Viewer
	XP_038935090	(Get FASTA)	NCBI Sequence Viewer
	XP_038935091	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM16331	(Get FASTA)	NCBI Sequence Viewer
	EDM16332	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000035072
	ENSRNOP00000035072.7
	ENSRNOP00000099393
	ENSRNOP00000099393.1
	ENSRNOP00000103913
	ENSRNOP00000103913.1
	ENSRNOP00000104529.1

RefSeq Acc Id:

NP_001123973 ⟸ NM_001130501

- UniProtKB:

D4A0R1 (UniProtKB/TrEMBL), A6HR90 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSRRKQSKPRQIKRPLEDAIEDEEEECPVEEADVIAKGDFPLEESFPTGFESENLSCEEVEFFC
NKGDDEGIQEPAESDGDSHSDKPGQPGVETDDWDGPGELEVFQRDGERKIQSRQQLPVGTTWGP
FAGKMDLNNNSLKTKAQVSMVLTAGPKWLLDVTWQGVEDSKNNCIVYSKGGQLWCTTTKAISEG
EELIAFVVDFDSRLQTASQMTLTEGMYPARLLDSIQLLPQQAAMASILPTAIVNKDIFPCKSCG
IWYRSERNLQAHLMYYCSGRQREAAPVSEENEDSTHQISSLCPFPQCTKSFSNARALEMHLTSH
SGVKMEEFLPPGASLKCTVCSYTADSVINFHQHLFSHLTQAAFRCNHCHFGFQTQRELLQHQEL
HVPGGKLPRESDMEHSPSGTEDSLQPATDLLARSDLSQSQKAMPTKDASSDTELDKCEKKTQLF
LTNQRPEMQPAANKQNFSYTKIKSEPSSPRLASSPVQPNLGPSFPVGPFLSQFAFPQDITMVPQ
ASEILAKMSELVHRRLRHGSSSYPPVIYSPLMPKGATCFECNITFNNLDNYLVHKKHYCSSRWQ
QMAKSPEFPSVSEKIPEALSPNTGQTSINLLNPAAHPPDPENPLLQTSCINSSTVLDLIGPNGK
GHEKDFSTQAKKLPTSNNNDDKINGKPVDVKNPSGPLVDGESDPNKTTCEACNITFSRHETYMV
HKQYYCATRHDPPLKRSASNKVPAMQRTMRTRKRRKMYEMCLPEQEQRPPLVQQRFLDVANLSN
PCSSTQEPTEGLGECYHPRCDIFPGIVSKHLETSLAINKCVPVPKCDTTHSSVSCLEMDVPIDL
SKKCLSQSERTTASPKRLLDYHECTVCKISFNKVENYLAHKQNFCPVTAHQRNDLGQLDGKVFP
NPESERNSPEVSFERNMIKCEKNGNPKQPSPNGNLFSSHLATLQGLKVFSEAAQLIATKEENKH
LFLPQCLYPGAIKKTKGADQLSPYYGIKPSDYIAGSLVIHNTDVEQNTNTENESPKGQASSNGC
AVPKKDSLPLLPKNRGMVIVNGGLKQDERPTANPQQENISQNAQHEDGHKSPSWISENPLAANE
NVSPGIPCAEEQLSSIAKGVNGSTQAPSSGKYCRLCDIQFNNLSNFITHKKFYCSSHAAEHVK

hide sequence

Ensembl Acc Id:

ENSRNOP00000035072 ⟸ ENSRNOT00000029419

RefSeq Acc Id:	XP_038935090 ⟸ XM_039079162
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038935091 ⟸ XM_039079163
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSRNOP00000103913 ⟸ ENSRNOT00000171636

Ensembl Acc Id:

ENSRNOP00000099393 ⟸ ENSRNOT00000128336

Ensembl Acc Id:

ENSRNOP00000104529 ⟸ ENSRNOT00000121714

Protein Domains

C2H2-type CCHC FOG-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A0R1-F1-model_v2	AlphaFold	D4A0R1	1-1090	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1306021	AgrOrtholog
BioCyc Gene	G2FUF-33537	BioCyc
Ensembl Genes	ENSRNOG00000004109	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000029419	ENTREZGENE
	ENSRNOT00000029419.8	UniProtKB/TrEMBL
	ENSRNOT00000121714.1	UniProtKB/TrEMBL
	ENSRNOT00000128336	ENTREZGENE
	ENSRNOT00000128336.1	UniProtKB/TrEMBL
	ENSRNOT00000171636	ENTREZGENE
	ENSRNOT00000171636.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	FOG	UniProtKB/TrEMBL
	ZF_CCHC_FOG	UniProtKB/TrEMBL
	ZFPM1/2_PR	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
KEGG Report	rno:314930	UniProtKB/TrEMBL
NCBI Gene	314930	ENTREZGENE
PANTHER	PTHR12958	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN ZFPM2	UniProtKB/TrEMBL
Pfam	CCHC_ZFPM2	UniProtKB/TrEMBL
	FOG1-like_PR	UniProtKB/TrEMBL
PhenoGen	Zfpm2	PhenoGen
PROSITE	ZF_CCHC_FOG	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000004109	RatGTEx
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0ABK0L4P1_RAT	UniProtKB/TrEMBL
	A0ABK0LEL3_RAT	UniProtKB/TrEMBL
	A0ABK0LRI2_RAT	UniProtKB/TrEMBL
	A6HR90	ENTREZGENE, UniProtKB/TrEMBL
	D4A0R1	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Zfpm2	zinc finger protein, multitype 2	Zfpm2_predicted	zinc finger protein, multitype 2 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Zfpm2_predicted	zinc finger protein, multitype 2 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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