Zdhhc21 (zDHHC palmitoyltransferase 21) - Rat Genome Database

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Gene: Zdhhc21 (zDHHC palmitoyltransferase 21) Rattus norvegicus
Analyze
Symbol: Zdhhc21
Name: zDHHC palmitoyltransferase 21 (Ensembl:zinc finger DHHC-type palmitoyltransferase 21)
RGD ID: 1305750
Description: Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in several processes, including regulation of establishment of endothelial barrier; regulation of leukocyte adhesion to arterial endothelial cell; and regulation of vascular associated smooth muscle contraction. Predicted to act upstream of or within hair follicle development and sebaceous gland development. Predicted to be located in plasma membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC21 (zinc finger DHHC-type palmitoyltransferase 21); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: palmitoyltransferase ZDHHC21; probable palmitoyltransferase ZDHHC21; zinc finger DHHC-type palmitoyltransferase 21; zinc finger, DHHC domain containing 21; zinc finger, DHHC-type containing 21
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85102,273,561 - 102,333,174 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl5102,278,710 - 102,327,247 (-)EnsemblGRCr8
mRatBN7.2597,227,621 - 97,286,866 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl597,229,345 - 97,286,537 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx599,611,105 - 99,659,736 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05101,409,446 - 101,457,993 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05101,421,958 - 101,470,589 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.05100,924,621 - 100,983,412 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5100,924,622 - 100,977,902 (-)Ensemblrn6Rnor6.0
Rnor_5.05104,943,485 - 105,005,337 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.45101,682,165 - 101,730,978 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera595,785,329 - 95,833,846 (-)NCBICelera
RGSC_v3.15101,688,931 - 101,728,070 (-)NCBI
Cytogenetic Map5q31NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
Golgi apparatus  (IEA,ISO)
membrane  (IEA)
plasma membrane  (IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:16647879   PMID:19956733   PMID:19997487   PMID:22031296   PMID:23034182  


Genomics

Comparative Map Data
Zdhhc21
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85102,273,561 - 102,333,174 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl5102,278,710 - 102,327,247 (-)EnsemblGRCr8
mRatBN7.2597,227,621 - 97,286,866 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl597,229,345 - 97,286,537 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx599,611,105 - 99,659,736 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05101,409,446 - 101,457,993 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05101,421,958 - 101,470,589 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.05100,924,621 - 100,983,412 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5100,924,622 - 100,977,902 (-)Ensemblrn6Rnor6.0
Rnor_5.05104,943,485 - 105,005,337 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.45101,682,165 - 101,730,978 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera595,785,329 - 95,833,846 (-)NCBICelera
RGSC_v3.15101,688,931 - 101,728,070 (-)NCBI
Cytogenetic Map5q31NCBI
ZDHHC21
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38914,588,797 - 14,693,432 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl914,586,766 - 14,693,737 (-)Ensemblhg38GRCh38
GRCh37914,611,069 - 14,693,430 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36914,607,028 - 14,683,474 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34914,607,027 - 14,683,469NCBI
Celera914,544,591 - 14,626,897 (-)NCBICelera
Cytogenetic Map9p22.3NCBI
HuRef914,574,541 - 14,656,729 (-)NCBIHuRef
CHM1_1914,611,116 - 14,693,518 (-)NCBICHM1_1
T2T-CHM13v2.0914,598,473 - 14,703,138 (-)NCBIT2T-CHM13v2.0
Zdhhc21
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39482,716,975 - 82,778,892 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl482,716,975 - 82,778,195 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38482,798,738 - 82,859,897 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl482,798,738 - 82,859,958 (-)Ensemblmm10GRCm38
MGSCv37482,444,642 - 82,505,565 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36482,273,794 - 82,330,738 (-)NCBIMGSCv36mm8
Celera481,327,649 - 81,390,311 (-)NCBICelera
Cytogenetic Map4C3NCBI
cM Map439.4NCBI
Zdhhc21
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543417,661,364 - 17,713,159 (-)Ensembl
ChiLan1.0NW_00495543417,653,708 - 17,712,565 (-)NCBIChiLan1.0ChiLan1.0
ZDHHC21
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v211109,844,487 - 109,986,606 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan19109,850,477 - 109,990,705 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0914,430,035 - 14,528,888 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1914,961,495 - 15,037,553 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl914,969,373 - 15,037,554 (-)EnsemblpanPan2panpan1.1
ZDHHC21
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11135,073,639 - 35,139,854 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1135,079,886 - 35,131,372 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1133,720,429 - 33,782,587 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01135,981,522 - 36,043,801 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1135,981,554 - 36,029,868 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11134,685,871 - 34,748,067 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01134,477,838 - 34,540,076 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01135,134,666 - 35,196,925 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Zdhhc21
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947149,783,085 - 149,852,127 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365398,243,274 - 8,305,044 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365398,243,134 - 8,304,811 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZDHHC21
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1207,836,573 - 207,912,546 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11207,836,490 - 207,913,463 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21231,595,560 - 231,605,033 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZDHHC21
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11264,890,380 - 64,983,993 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1264,905,489 - 64,956,788 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366603853,108,387 - 53,203,367 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zdhhc21
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473618,873,563 - 18,937,704 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462473618,876,167 - 18,937,383 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Zdhhc21
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1170,869,582 - 70,921,113 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Zdhhc21
283 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:56
Count of miRNA genes:44
Interacting mature miRNAs:47
Transcripts:ENSRNOT00000013950
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357396Bw44Body weight QTL 444.19body mass (VT:0001259)body weight (CMO:0000012)573779642118779642Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)5102105698152749382Rat
2303586Gluco52Glucose level QTL 522blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)5100826632145826632Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)544924861153890773Rat
61380Edpm5Estrogen-dependent pituitary mass QTL 54.50.92pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)573779642103472210Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)538207390136631402Rat
1298070Scl18Serum cholesterol level QTL 183.7blood LDL cholesterol amount (VT:0000181)calculated plasma low density lipoprotein cholesterol level (CMO:0001245)584630798129630798Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)565089051103648916Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)599905133172190305Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)548523123134369373Rat
2302381Bw84Body weight QTL 844.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)573779642118779642Rat
1357402Bw46Body weight QTL 464.47body mass (VT:0001259)body mass index (BMI) (CMO:0000105)573779642118779642Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)592583776137583776Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)565089051166764498Rat
1598859Cm66Cardiac mass QTL 662heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)584630798129630798Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)551657967166600247Rat
7411564Bw135Body weight QTL 1350.001body mass (VT:0001259)body weight gain (CMO:0000420)592583776137583776Rat
8657050Bw146Body weight QTL 14619.840.001body mass (VT:0001259)body weight gain (CMO:0000420)598972960143972960Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555124766172190305Rat
7411601Foco12Food consumption QTL 1219.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)592583776137583776Rat
2303618Vencon1Ventilatory control QTL 13.8respiration trait (VT:0001943)oxygen consumption (CMO:0002169)5100826632145826632Rat
7394708Emca11Estrogen-induced mammary cancer QTL 11mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)573176602118176602Rat
1598846Bp293Blood pressure QTL 2933.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)584630798129630798Rat
7394710Emca12Estrogen-induced mammary cancer QTL 12mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)594034903139034903Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)569474415114474415Rat
1358909Kidm25Kidney mass QTL 251.87kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)595062526133270832Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)560601597137492949Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)560511627105511627Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)536460764136631402Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)564589016109589016Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)574335621156302135Rat
1600362Mcs19Mammary carcinoma susceptibility QTL 192.5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)582032155127032155Rat
1298086Bp156Blood pressure QTL 156arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)589369373134369373Rat
2290005Mcs24Mammary carcinoma susceptibility QTL 24mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)569835120114835120Rat
2306971Anxrr21Anxiety related response QTL 219.47fear/anxiety-related behavior trait (VT:1000241)number of entries into a discrete space in an experimental apparatus (CMO:0000960)570969494136328156Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)597492524133270832Rat
2312671Scl64Serum cholesterol level QTL 640.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)573779642118779642Rat
6903316Bw113Body weight QTL 11320.0103body mass (VT:0001259)body weight (CMO:0000012)592881678137881678Rat
1358889Bp261Blood pressure QTL 2612.86arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)595062526133270832Rat

Markers in Region
RH134292  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2597,232,874 - 97,233,075 (+)MAPPERmRatBN7.2
Rnor_6.05100,924,726 - 100,924,926NCBIRnor6.0
Rnor_5.05104,947,750 - 104,947,950UniSTSRnor5.0
RGSC_v3.45101,682,270 - 101,682,470UniSTSRGSC3.4
Celera595,785,434 - 95,785,634UniSTS
RH 3.4 Map5727.6UniSTS
Cytogenetic Map5q31UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000013950   ⟹   ENSRNOP00000013949
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl5100,935,230 - 100,970,043 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000077429   ⟹   ENSRNOP00000072168
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl597,229,345 - 97,286,537 (-)Ensembl
Rnor_6.0 Ensembl5100,924,622 - 100,977,902 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000168442   ⟹   ENSRNOP00000106635
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl5102,278,710 - 102,327,247 (-)Ensembl
RefSeq Acc Id: NM_001039009   ⟹   NP_001034098
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85102,278,709 - 102,327,247 (-)NCBI
mRatBN7.2597,232,770 - 97,281,308 (-)NCBI
Rnor_6.05100,924,621 - 100,977,902 (-)NCBI
Rnor_5.05104,943,485 - 105,005,337 (-)NCBI
RGSC_v3.45101,682,165 - 101,730,978 (-)RGD
Celera595,785,329 - 95,833,846 (-)RGD
Sequence:
RefSeq Acc Id: XM_008763766   ⟹   XP_008761988
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85102,273,561 - 102,332,645 (-)NCBI
mRatBN7.2597,227,621 - 97,286,717 (-)NCBI
Rnor_6.05100,935,095 - 100,983,243 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008763767   ⟹   XP_008761989
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85102,273,561 - 102,333,174 (-)NCBI
mRatBN7.2597,227,621 - 97,286,866 (-)NCBI
Rnor_6.05100,935,095 - 100,983,412 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008763768   ⟹   XP_008761990
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85102,273,561 - 102,330,120 (-)NCBI
mRatBN7.2597,227,621 - 97,284,178 (-)NCBI
Rnor_6.05100,935,095 - 100,980,801 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039109506   ⟹   XP_038965434
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85102,273,561 - 102,332,645 (-)NCBI
mRatBN7.2597,227,621 - 97,286,714 (-)NCBI
RefSeq Acc Id: XM_039109507   ⟹   XP_038965435
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85102,273,561 - 102,332,645 (-)NCBI
mRatBN7.2597,227,621 - 97,286,716 (-)NCBI
RefSeq Acc Id: XM_063287366   ⟹   XP_063143436
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85102,273,561 - 102,332,609 (-)NCBI
RefSeq Acc Id: NP_001034098   ⟸   NM_001039009
- UniProtKB: Q2TGI9 (UniProtKB/TrEMBL),   A6J842 (UniProtKB/TrEMBL),   A0A0G2K2A9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008761989   ⟸   XM_008763767
- Peptide Label: isoform X1
- UniProtKB: Q2TGI9 (UniProtKB/TrEMBL),   A6J842 (UniProtKB/TrEMBL),   A0A0G2K2A9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008761988   ⟸   XM_008763766
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008761990   ⟸   XM_008763768
- Peptide Label: isoform X1
- UniProtKB: Q2TGI9 (UniProtKB/TrEMBL),   A6J842 (UniProtKB/TrEMBL),   A0A0G2K2A9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000072168   ⟸   ENSRNOT00000077429
Ensembl Acc Id: ENSRNOP00000013949   ⟸   ENSRNOT00000013950
RefSeq Acc Id: XP_038965435   ⟸   XM_039109507
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038965434   ⟸   XM_039109506
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063143436   ⟸   XM_063287366
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000106635   ⟸   ENSRNOT00000168442
Protein Domains
Palmitoyltransferase DHHC

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q2TGI9-F1-model_v2 AlphaFold Q2TGI9 1-265 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305750 AgrOrtholog
BioCyc Gene G2FUF-40890 BioCyc
Ensembl Genes ENSRNOG00000010484 Ensembl
  ENSRNOG00000074898 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000168442 ENTREZGENE
  ENSRNOT00000168442.1 UniProtKB/TrEMBL
InterPro PFA4/ZDH16/20/ERF2-like UniProtKB/TrEMBL
  Znf_DHHC UniProtKB/TrEMBL
KEGG Report rno:298184 UniProtKB/TrEMBL
NCBI Gene 298184 ENTREZGENE
PANTHER PALMITOYLTRANSFERASE ZDHHC21 UniProtKB/TrEMBL
  ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN UniProtKB/TrEMBL
Pfam zf-DHHC UniProtKB/TrEMBL
PhenoGen Zdhhc21 PhenoGen
PROSITE DHHC UniProtKB/TrEMBL
RatGTEx ENSRNOG00000010484 RatGTEx
  ENSRNOG00000074898 RatGTEx
UniProt A0A0G2K2A9 ENTREZGENE, UniProtKB/TrEMBL
  A6J842 ENTREZGENE, UniProtKB/TrEMBL
  Q2TGI9 ENTREZGENE
UniProt Secondary Q2TGI9 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2025-11-13 Zdhhc21  zDHHC palmitoyltransferase 21  Zdhhc21  zinc finger DHHC-type palmitoyltransferase 21  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2019-11-11 Zdhhc21  zinc finger DHHC-type palmitoyltransferase 21  Zdhhc21  zinc finger, DHHC-type containing 21  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-11-17 Zdhhc21  zinc finger, DHHC-type containing 21  Zdhhc21  zinc finger, DHHC domain containing 21  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 Zdhhc21  zinc finger, DHHC domain containing 21  Zdhhc21_predicted  zinc finger, DHHC domain containing 21 (predicted)  Symbol and Name status set to approved 1299863 APPROVED
2005-01-12 Zdhhc21_predicted  zinc finger, DHHC domain containing 21 (predicted)      Symbol and Name status set to approved 70820 APPROVED