Asxl2 (ASXL transcriptional regulator 2) - Rat Genome Database

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Gene: Asxl2 (ASXL transcriptional regulator 2) Rattus norvegicus
Analyze
Symbol: Asxl2
Name: ASXL transcriptional regulator 2
RGD ID: 1304710
Description: Predicted to enable chromatin binding activity and peroxisome proliferator activated receptor binding activity. Predicted to be involved in several processes, including positive regulation of fat cell differentiation; positive regulation of peroxisome proliferator activated receptor signaling pathway; and positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including heart development; positive regulation of bone mineralization involved in bone maturation; and positive regulation of myeloid leukocyte differentiation. Predicted to be located in nucleus. Predicted to be part of PR-DUB complex. Orthologous to human ASXL2 (ASXL transcriptional regulator 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; gentamycin; valproic acid.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: additional sex combs like 2; additional sex combs like 2 (Drosophila); additional sex combs like 2, transcriptional regulator; additional sex combs like transcriptional regulator 2; LOC313922; putative Polycomb group protein ASXL2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8632,090,497 - 32,234,487 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl632,145,607 - 32,227,851 (+)EnsemblGRCr8
mRatBN7.2626,425,017 - 26,514,899 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl626,425,954 - 26,507,477 (+)EnsemblmRatBN7.2
Rnor_6.0627,835,346 - 27,919,285 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl627,887,797 - 27,915,563 (+)Ensemblrn6Rnor6.0
Rnor_5.0637,644,433 - 37,732,264 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4626,400,855 - 26,482,465 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera625,902,447 - 25,987,120 (+)NCBICelera
RGSC_v3.1626,470,864 - 26,484,531 (+)NCBI
Cytogenetic Map6q14NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleoplasm  (IEA,ISO)
nucleus  (IEA,ISO)
PR-DUB complex  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Reciprocal regulation of LXRα activity by ASXL1 and ASXL2 in lipogenesis. Park UH, etal., Biochem Biophys Res Commun. 2014 Jan 10;443(2):489-94. doi: 10.1016/j.bbrc.2013.11.124. Epub 2013 Dec 7.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19270745   PMID:20577743   PMID:21047783   PMID:21490954   PMID:23046516   PMID:24860998  


Genomics

Comparative Map Data
Asxl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8632,090,497 - 32,234,487 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl632,145,607 - 32,227,851 (+)EnsemblGRCr8
mRatBN7.2626,425,017 - 26,514,899 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl626,425,954 - 26,507,477 (+)EnsemblmRatBN7.2
Rnor_6.0627,835,346 - 27,919,285 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl627,887,797 - 27,915,563 (+)Ensemblrn6Rnor6.0
Rnor_5.0637,644,433 - 37,732,264 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4626,400,855 - 26,482,465 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera625,902,447 - 25,987,120 (+)NCBICelera
RGSC_v3.1626,470,864 - 26,484,531 (+)NCBI
Cytogenetic Map6q14NCBI
ASXL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38225,733,753 - 25,878,487 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl225,733,753 - 25,878,487 (-)Ensemblhg38GRCh38
GRCh37225,956,622 - 26,101,356 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36225,815,757 - 25,954,816 (-)NCBIBuild 36Build 36hg18NCBI36
Build 34225,873,909 - 26,013,007NCBI
Celera225,802,588 - 25,941,650 (-)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef225,699,339 - 25,838,712 (-)NCBIHuRef
CHM1_1225,891,914 - 26,030,899 (-)NCBICHM1_1
T2T-CHM13v2.0225,769,050 - 25,913,813 (-)NCBIT2T-CHM13v2.0
Asxl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39123,476,892 - 3,560,811 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl123,476,857 - 3,556,852 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38123,426,857 - 3,510,811 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl123,426,857 - 3,506,852 (+)Ensemblmm10GRCm38
MGSCv37123,426,884 - 3,506,849 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36123,426,901 - 3,502,468 (+)NCBIMGSCv36mm8
Celera123,353,949 - 3,434,249 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map121.81NCBI
Asxl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554697,786,154 - 7,923,500 (-)Ensembl
ChiLan1.0NW_0049554697,786,030 - 7,923,739 (-)NCBIChiLan1.0ChiLan1.0
ASXL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212100,638,203 - 100,792,850 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A100,642,167 - 100,796,817 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A25,730,155 - 25,880,089 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A25,824,278 - 25,973,659 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A25,832,527 - 25,973,659 (-)EnsemblpanPan2panpan1.1
ASXL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11719,914,026 - 20,065,141 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1719,895,568 - 20,044,691 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1719,810,081 - 19,960,956 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01720,235,589 - 20,386,543 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1720,244,106 - 20,366,511 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11719,923,297 - 20,074,379 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01719,932,920 - 20,084,155 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01719,978,936 - 20,130,179 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Asxl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629264,237,321 - 64,375,709 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364936,463,744 - 6,594,252 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049364936,463,771 - 6,602,244 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ASXL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3113,044,836 - 113,180,742 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.13113,044,788 - 113,184,809 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23119,991,762 - 120,173,786 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ASXL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11481,770,068 - 81,919,200 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604530,233,714 - 30,387,990 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Asxl2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247387,603,252 - 8,100,369 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247387,958,610 - 8,100,223 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Asxl2
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1724,116,267 - 24,198,159 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Asxl2
719 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:42
Count of miRNA genes:20
Interacting mature miRNAs:21
Transcripts:ENSRNOT00000015827, ENSRNOT00000061505
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6197587946975879Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)62009763565097635Rat
8552910Pigfal5Plasma insulin-like growth factor 1 level QTL 54.3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)62265388967653889Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)62009763565097635Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6323998948239989Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63118500276185002Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6197587946975879Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6197587946975879Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6144788383Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6197587946975879Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6197587946975879Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)620859430113082285Rat
2301964Bp323Blood pressure QTL 3234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6186868070Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6323998948239989Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6323998948239989Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62661831486868070Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6140163351Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)63093763275937632Rat
70199Coreg1Compensatory renal growth QTL 111.8kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)61459947363457687Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)61608937261967788Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6144788383Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6323998948239989Rat
1359023Bp272Blood pressure QTL 2722.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)62228825732981219Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)62228825767288257Rat

Markers in Region
BF404323  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2626,425,745 - 26,425,935 (+)MAPPERmRatBN7.2
Rnor_6.0627,835,324 - 27,835,513NCBIRnor6.0
Rnor_5.0637,645,596 - 37,645,785UniSTSRnor5.0
RGSC_v3.4626,400,946 - 26,401,135UniSTSRGSC3.4
Celera625,902,425 - 25,902,614UniSTS
RH 3.4 Map6117.39UniSTS
Cytogenetic Map6q14UniSTS
BF399538  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2626,425,599 - 26,425,768 (+)MAPPERmRatBN7.2
Rnor_6.0627,835,178 - 27,835,346NCBIRnor6.0
Rnor_5.0637,645,450 - 37,645,618UniSTSRnor5.0
RGSC_v3.4626,400,800 - 26,400,968UniSTSRGSC3.4
Celera625,902,279 - 25,902,447UniSTS
RH 3.4 Map6116.9UniSTS
Cytogenetic Map6q14UniSTS
AU048346  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0627,856,385 - 27,856,508NCBIRnor6.0
Rnor_5.0637,666,657 - 37,666,780UniSTSRnor5.0
RGSC_v3.4626,422,007 - 26,422,131UniSTSRGSC3.4
Celera625,923,486 - 25,923,610UniSTS
Cytogenetic Map6q14UniSTS
RH140747  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2626,426,076 - 26,426,222 (+)MAPPERmRatBN7.2
Rnor_6.0627,835,655 - 27,835,800NCBIRnor6.0
Rnor_5.0637,645,927 - 37,646,072UniSTSRnor5.0
RGSC_v3.4626,401,277 - 26,401,422UniSTSRGSC3.4
Celera625,902,756 - 25,902,901UniSTS
RH 3.4 Map6117.5UniSTS
Cytogenetic Map6q14UniSTS
Asxl2DS-g-a-48f06_r1_177  
Rat AssemblyChrPosition (strand)SourceJBrowse
RGSC_v3.4626,458,168 - 26,458,168 (+)RGDRGSC3.4


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003754155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003754156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006225712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006225713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000015827   ⟹   ENSRNOP00000015827
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl632,145,607 - 32,227,851 (+)Ensembl
mRatBN7.2 Ensembl626,460,689 - 26,507,477 (+)Ensembl
Rnor_6.0 Ensembl627,887,797 - 27,915,563 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000105980   ⟹   ENSRNOP00000081020
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl632,145,607 - 32,227,851 (+)Ensembl
mRatBN7.2 Ensembl626,425,954 - 26,507,477 (+)Ensembl
RefSeq Acc Id: XM_063262610   ⟹   XP_063118680
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,144,276 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262611   ⟹   XP_063118681
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,144,276 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262612   ⟹   XP_063118682
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,090,497 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262613   ⟹   XP_063118683
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,160,204 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262614   ⟹   XP_063118684
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,168,740 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262615   ⟹   XP_063118685
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,168,740 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262616   ⟹   XP_063118686
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,168,740 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262617   ⟹   XP_063118687
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,168,738 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262618   ⟹   XP_063118688
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,174,354 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262619   ⟹   XP_063118689
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,200,678 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262620   ⟹   XP_063118690
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,213,209 - 32,234,487 (+)NCBI
RefSeq Acc Id: XR_010052213
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,144,276 - 32,234,487 (+)NCBI
Ensembl Acc Id: ENSRNOP00000015827   ⟸   ENSRNOT00000015827
Ensembl Acc Id: ENSRNOP00000081020   ⟸   ENSRNOT00000105980
RefSeq Acc Id: XP_063118682   ⟸   XM_063262612
- Peptide Label: isoform X3
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118680   ⟸   XM_063262610
- Peptide Label: isoform X1
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118681   ⟸   XM_063262611
- Peptide Label: isoform X2
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118683   ⟸   XM_063262613
- Peptide Label: isoform X3
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118687   ⟸   XM_063262617
- Peptide Label: isoform X4
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118686   ⟸   XM_063262616
- Peptide Label: isoform X4
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118685   ⟸   XM_063262615
- Peptide Label: isoform X4
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118684   ⟸   XM_063262614
- Peptide Label: isoform X4
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118688   ⟸   XM_063262618
- Peptide Label: isoform X4
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118689   ⟸   XM_063262619
- Peptide Label: isoform X5
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118690   ⟸   XM_063262620
- Peptide Label: isoform X6
- UniProtKB: D3Z8N9 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3Z8N9-F1-model_v2 AlphaFold D3Z8N9 1-1225 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1304710 AgrOrtholog
BioCyc Gene G2FUF-38293 BioCyc
Ensembl Genes ENSRNOG00000011908 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000015827 ENTREZGENE
  ENSRNOT00000015827.10 UniProtKB/TrEMBL
  ENSRNOT00000105980 ENTREZGENE
  ENSRNOT00000105980.2 UniProtKB/TrEMBL
InterPro ASX-like_PHD UniProtKB/TrEMBL
  ASX/ASX-like UniProtKB/TrEMBL
  ASXH UniProtKB/TrEMBL
  DEUBAD_dom UniProtKB/TrEMBL
NCBI Gene 313922 ENTREZGENE
PANTHER PTHR13578 UniProtKB/TrEMBL
  PTHR13578:SF11 UniProtKB/TrEMBL
Pfam ASXH UniProtKB/TrEMBL
  PHD_3 UniProtKB/TrEMBL
PhenoGen Asxl2 PhenoGen
PROSITE DEUBAD UniProtKB/TrEMBL
RatGTEx ENSRNOG00000011908 RatGTEx
UniProt A0A8I5ZR15_RAT UniProtKB/TrEMBL
  D3Z8N9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-18 Asxl2  ASXL transcriptional regulator 2  Asxl2  additional sex combs like 2, transcriptional regulator  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-12-02 Asxl2  additional sex combs like 2, transcriptional regulator  Asxl2  additional sex combs like transcriptional regulator 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2014-06-25 Asxl2  additional sex combs like transcriptional regulator 2  Asxl2  additional sex combs like 2 (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Asxl2  additional sex combs like 2 (Drosophila)   Asxl2_predicted  additional sex combs like 2 (Drosophila) (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Asxl2_predicted  additional sex combs like 2 (Drosophila) (predicted)      Symbol and Name status set to approved 70820 APPROVED