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Gene: Zfp169 (zinc finger protein 169) Rattus norvegicus

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Symbol:

Zfp169

Name:

zinc finger protein 169

RGD ID:

1304631

Description:

Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF169 (zinc finger protein 169); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,5-hexanedione.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC306816; Znf169

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF169 (zinc finger protein 169)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, PhylomeDB
Mus musculus (house mouse):	Zfp169 (zinc finger protein 169)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF169 (zinc finger protein 169)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF169 (zinc finger protein 169)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ZNF169 (zinc finger protein 169)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF169 (zinc finger protein 169)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Znf169 (zinc finger protein 169)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	REPIN1 (replication initiator 1)	HGNC	Treefam
Homo sapiens (human):	ZNF467 (zinc finger protein 467)	HGNC	Treefam
Homo sapiens (human):	ZNF786 (zinc finger protein 786)	HGNC	Treefam
Homo sapiens (human):	ZNF425 (zinc finger protein 425)	HGNC	Treefam
Alliance orthologs ³
Homo sapiens (human):	ZNF169 (zinc finger protein 169)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ZNF169 (zinc finger protein 169)	Alliance	DIOPT (Ensembl Compara\|HGNC\|OMA\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfp169 (zinc finger protein 169)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Zfp169 (zinc finger protein 169)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	crol	Alliance	DIOPT (Hieranoid\|InParanoid)
Drosophila melanogaster (fruit fly):	crol	Alliance	DIOPT (OrthoInspector\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	ZAP1	Alliance	DIOPT (Hieranoid\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG2712	Alliance	DIOPT (Ensembl Compara\|PANTHER)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	16,345,569 - 16,379,079 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	16,345,647 - 16,373,928 (+)	Ensembl				GRCr8
mRatBN7.2	17	16,139,204 - 16,167,242 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	16,139,253 - 16,169,914 (+)	Ensembl				mRatBN7.2
Rnor_6.0	17	16,443,324 - 16,471,329 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	16,455,026 - 16,470,842 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	18,499,298 - 18,527,534 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	22,150,391 - 22,175,482 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	15,865,642 - 15,893,659 (+)	NCBI		Celera
RGSC_v3.1	17	22,163,194 - 22,175,482 (+)	NCBI
Cytogenetic Map	17	p14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

obesity (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2,5-hexanedione (EXP)

4,4'-sulfonyldiphenol (ISO)

acrylamide (EXP,ISO)

aflatoxin B1 (EXP)

amphetamine (EXP)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium dichloride (ISO)

cyclophosphamide (EXP)

gentamycin (EXP)

okadaic acid (ISO)

tetrachloromethane (EXP)

titanium dioxide (ISO)

triptonide (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

nucleus (IBA,IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

metal ion binding (IEA)

protein binding (ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IBA)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Zfp169
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	17	16,345,569 - 16,379,079 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	17	16,345,647 - 16,373,928 (+)	Ensembl				GRCr8
mRatBN7.2	17	16,139,204 - 16,167,242 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	17	16,139,253 - 16,169,914 (+)	Ensembl				mRatBN7.2
Rnor_6.0	17	16,443,324 - 16,471,329 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	17	16,455,026 - 16,470,842 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	17	18,499,298 - 18,527,534 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	17	22,150,391 - 22,175,482 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	17	15,865,642 - 15,893,659 (+)	NCBI		Celera
RGSC_v3.1	17	22,163,194 - 22,175,482 (+)	NCBI
Cytogenetic Map	17	p14	NCBI

ZNF169
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	94,259,298 - 94,301,829 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	94,259,298 - 94,303,967 (+)	Ensembl			hg38	GRCh38
GRCh37	9	97,021,580 - 97,064,111 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	96,061,399 - 96,105,112 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	9	94,120,594 - 94,143,279	NCBI
Celera	9	67,463,117 - 67,506,809 (+)	NCBI		Celera
Cytogenetic Map	9	q22.32	NCBI
HuRef	9	66,699,287 - 66,743,328 (+)	NCBI		HuRef
CHM1_1	9	97,168,497 - 97,211,917 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	106,427,373 - 106,469,821 (+)	NCBI		T2T-CHM13v2.0

Zfp169
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	48,634,239 - 48,666,969 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	48,641,123 - 48,666,927 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	13	48,480,763 - 48,513,493 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	48,487,647 - 48,513,451 (-)	Ensembl			mm10	GRCm38
MGSCv37	13	48,583,028 - 48,608,805 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	13	48,499,596 - 48,525,331 (-)	NCBI		MGSCv36	mm8
Celera	13	49,577,441 - 49,603,302 (-)	NCBI		Celera
Cytogenetic Map	13	A5	NCBI
cM Map	13	24.81	NCBI

ZNF169
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	45,143,118 - 45,183,757 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	45,145,498 - 45,186,149 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	65,368,373 - 65,408,193 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	93,433,551 - 93,468,404 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	93,443,042 - 93,468,404 (+)	Ensembl			panPan2	panpan1.1

ZNF169
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	97,811,128 - 97,854,011 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	97,811,274 - 97,853,966 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	98,204,423 - 98,250,305 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	98,428,171 - 98,471,276 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	98,428,253 - 98,471,223 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	98,040,018 - 98,086,270 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	97,769,992 - 97,815,494 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	98,533,818 - 98,576,895 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

ZNF169
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	43,504,685 - 43,558,908 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	3	43,503,225 - 43,561,299 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	44,956,020 - 44,963,137 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF169
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	104,586,491 - 104,626,236 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666038	92,906,991 - 92,949,022 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Znf169
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	14	67,472,963 - 67,486,281 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Zfp169
246 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	106
Count of miRNA genes:	89
Interacting mature miRNAs:	92
Transcripts:	ENSRNOT00000022932
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354581	Bp247	Blood pressure QTL 247	4.5		arterial blood pressure trait (VT:2000000)	pulse pressure (CMO:0000292)	17	1	43999106	Rat
2300002	Iddm36	Insulin dependent diabetes mellitus QTL 36	1.98		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	17	9266755	40968173	Rat
2293664	Bmd28	Bone mineral density QTL 28	5.1	0.0001	femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	17	4360057	27233623	Rat
8552966	Pigfal18	Plasma insulin-like growth factor 1 level QTL 18	8.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	17	12860942	57860942	Rat
1300123	Bp194	Blood pressure QTL 194	2.82		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	17	2120843	42054133	Rat
1582224	Epfw4	Epididymal fat weight QTL 4	3.5	0.0058	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	17	9206505	23859062	Rat
1582225	Bw67	Body weight QTL 67	6.2	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	17	9206505	23859062	Rat
2302377	Scl61	Serum cholesterol level QTL 61	4.36		blood HDL cholesterol amount (VT:0000184)	serum high density lipoprotein cholesterol level (CMO:0000361)	17	6221998	58177198	Rat
1582226	Bw64	Body weight QTL 64	4.2	0.0017	body mass (VT:0001259)	body weight (CMO:0000012)	17	9206505	23859062	Rat
9589151	Insul30	Insulin level QTL 30	8.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	17	12860942	57860942	Rat
10401807	Kidm52	Kidney mass QTL 52			kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	17	1	31706603	Rat
10054088	Scort28	Serum corticosterone level QTL 28	2.04	0.0102	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	4733534	49733534	Rat
9589057	Scfw6	Subcutaneous fat weight QTL 6	8.62	0.001	subcutaneous adipose mass (VT:1000472)	abdominal subcutaneous fat pad weight (CMO:0002069)	17	12860942	57860942	Rat
1582208	Kidm32	Kidney mass QTL 32	3.9	0.0018	kidney mass (VT:0002707)	both kidneys wet weight (CMO:0000085)	17	9206505	23859062	Rat
9590154	Scort9	Serum corticosterone level QTL 9	23.57	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	12860942	57860942	Rat
9590088	Insglur7	Insulin/glucose ratio QTL 7	20.38	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	17	12860942	57860942	Rat
1549900	Iddm20	Insulin dependent diabetes mellitus QTL 20	3.7		pancreas integrity trait (VT:0010560)	percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)	17	1	22181410	Rat
1331720	Rf43	Renal function QTL 43	2.881		kidney blood vessel physiology trait (VT:0100012)	absolute change in renal vascular resistance (CMO:0001900)	17	15537025	28637951	Rat
2317053	Aia25	Adjuvant induced arthritis QTL 25	2.69		joint integrity trait (VT:0010548)	right rear ankle joint diameter (CMO:0002150)	17	10604694	55604694	Rat
1354613	Kidm14	Kidney mass QTL 14	6.2		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	17	1	36045694	Rat
1331765	Hrtrt15	Heart rate QTL 15	4.094		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	17	15537025	60531414	Rat
7411666	Foco31	Food consumption QTL 31	11.4	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	17	12860942	57860942	Rat
2324619	Coatc4	Coat color QTL 4		0.001	coat/hair pigmentation trait (VT:0010463)	pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)	17	1	21499218	Rat
2303627	Vencon8	Ventilatory control QTL 8		0.001	respiration trait (VT:0001943)	tidal volume (CMO:0000222)	17	4733534	49733534	Rat
1581553	Pur14	Proteinuria QTL 14	5.3	0.0001	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	17	7985243	16523460	Rat
70184	BpQTLcluster14	Blood pressure QTL cluster 14	3.38		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	17	8574342	32199534	Rat
1582258	Bw76	Body weight QTL 76	4.6	0.0005	body mass (VT:0001259)	body weight (CMO:0000012)	17	9206505	23859062	Rat
631207	Niddm41	Non-insulin dependent diabetes mellitus QTL 41			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	17	1	38037084	Rat
1582199	Insul5	Insulin level QTL 5	3.4	0.0119	blood insulin amount (VT:0001560)	calculated serum insulin level (CMO:0000359)	17	9206505	23859062	Rat
1354662	Rf49	Renal function QTL 49	2.9		blood creatinine amount (VT:0005328)	plasma creatinine level (CMO:0000537)	17	1	43999106	Rat
2293648	Bmd31	Bone mineral density QTL 31	4.5	0.0001	femur size trait (VT:1000369)	femoral neck cortical cross-sectional area (CMO:0001702)	17	4360057	27233623	Rat
1354658	Spl8	Serum phospholipid level QTL 8	3.8		blood VLDL phospholipid amount (VT:0010507)	blood very low density lipoprotein phospholipid level (CMO:0001571)	17	1	43999106	Rat
1641902	Colcr7	Colorectal carcinoma resistance QTL 7	3.35	0.0044	intestine integrity trait (VT:0010554)	benign colorectal tumor surface area measurement (CMO:0001799)	17	2120843	22087569	Rat
1582241	Bw70	Body weight QTL 70	4.6	0.0003	body mass (VT:0001259)	body weight (CMO:0000012)	17	9206505	23859062	Rat
1582245	Bw73	Body weight QTL 73	4.6	0.0004	body mass (VT:0001259)	body weight (CMO:0000012)	17	9206505	23859062	Rat
9590316	Scort21	Serum corticosterone level QTL 21	4.75	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	17	1	22877318	Rat

Markers in Region

RH124916

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_5.0	14	84,142,902 - 84,142,993	NCBI	Rnor5.0
Rnor_5.0	17	16,910,297 - 16,910,388	NCBI	Rnor5.0
RGSC_v3.4	17	22,166,351 - 22,166,441	UniSTS	RGSC3.4
RGSC_v3.4	14	83,850,519 - 83,850,609	UniSTS	RGSC3.4
Celera	17	15,885,935 - 15,886,025	UniSTS
Celera	14	77,013,689 - 77,013,779	UniSTS
Cytogenetic Map	17	p14	UniSTS
Cytogenetic Map	14	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	160	91	90	59	92	59	6	353	192	10	139	78	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001427271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_001057444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006222360	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006253745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000022932 ⟹ ENSRNOP00000022932

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	16,345,647 - 16,373,928 (+)	Ensembl
mRatBN7.2 Ensembl	17	16,139,253 - 16,169,914 (+)	Ensembl
Rnor_6.0 Ensembl	17	16,455,026 - 16,470,842 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000124749 ⟹ ENSRNOP00000102330

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	16,349,925 - 16,373,604 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000133482 ⟹ ENSRNOP00000111135

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	17	16,345,647 - 16,373,928 (+)	Ensembl

RefSeq Acc Id:

NM_001427271 ⟹ NP_001414200

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	16,345,647 - 16,373,604 (+)	NCBI

RefSeq Acc Id:

XM_006253745 ⟹ XP_006253807

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	17	16,345,569 - 16,379,079 (+)	NCBI
mRatBN7.2	17	16,139,204 - 16,167,242 (+)	NCBI
Rnor_6.0	17	16,443,324 - 16,471,329 (+)	NCBI
Rnor_5.0	17	18,499,298 - 18,527,534 (+)	NCBI

Sequence:

show sequence

CGCTGCGTGGGTAGTGAAGTGCGCGCGCGTCATCCCGGTCGGTGTACTTCCGCATCCTGCAGTC
GTCACCTGTGCCTGTGGACGATCCTCCCGCGGTTCTGATTGGACTCTGAAGGCAGACACCTCTC
TGAGGAGAGTATTCTGGAACGTGGGAAATGGCCCCAGGGCTCCTGACAACCAGAGACAAGGCAT
TAATGGCTTTTCATGACGTGGCCGTGGCCTTCAGCCAGACGGAGTGGAAGCTGTTGAGTCCTGC
TCAGAGGATCCTATACAGGGAAGTGATGCTGGAGAACTATAGCCATCTGGTCTCCCTGGGAATT
GCTTTTCCCAAACCGAAACTCATCACACAGCTGGAACAAGGAACAGAGCCCTGGAGAGATGGAT
GTCTTCTGGACCTCTGTTCAGCAGAACCCAGGACAGAATTAGAGGCCGGTCTCTCCTGCCCGAT
ATCCTTTGCTAGTCCAGAAGTCCTCAGAGTGTGTGTGCTGAATGGATCTCCCTCTCAGACTTTC
CCAAGCCCACCAGAAGGAGGCAACTTCCAGTCAGAAGCTCCAGGCTGTTCTAGCAATGGAGGAG
GTGAAGAGAGAGACAACAGTGATGCTCTGTTGCAGAGGACGAGTCCAACAAGGATTCTGAAGAC
GTTCTTTAGCCCATGTCAAGGTCAGATGGCATACTGGGCAGAAGGCGACAGTAAGCAAACAGAC
CTTGGCCTGGCCCCTGAGGAGGCAGTCCCGGTGTTGAAGGGACCCGATGAGTCAGCATCTGGAG
CCGTCATACAAGGAGCGTTTCCACTAGGGCTTAATGATGTCACAAACCTGTTCAGCCCTCAGAA
GCATCACGTATATCCTGACTGTGGAGGGGGCTTTTGCCAGAGTTCGGACCTCATGAAGCTCCAG
AGAATGGACGGAGGGGAGAAGCCTTACTCGTGCTCGGAGTGTGGGCACCAGTTTACTCAGAAGG
CTTCTCTCACTGTCCATCAGAGGAAACACTCGGGAGAGAAGCCACACGTGTGTGGGGAGTGTGG
GCGAGGCTTCATGTATGTATCGTCCCTCAACAGCCACAAGAAGATTATTCACTCTGGAGAGAGA
CCCCTTGTATGTCCGGAGTGTGGGCGTGGCTTCCGCCAGAAGATAGACCTCCTCCTCCACCAGC
GGACTCACCTGGATAAAAAGCCCTTCGTGTGCCCTGAGTGTGGGAGGGGCTTTTGCCGGAAGGC
CTCACTACTGCAACACCGGTGGTCACACTCTGGTGACAACCCCTTCATATGCTCAGTGTGTGGG
CGTGGCTTCAGGCTGCTCTCCAGGCTTCTCACTCATCAGATCACCCACTCCGGGGAGAAACCAC
ACGTTTGCCCCGATTGCGGGCAACGCTTTGGCCAAAAGGGTACGCTCATGAGACATCAGAAGAC
ACACACAGGGGAGAAGCCTTACGTGTGTCGCCAGTGTGGCTGGAGTTTCACCCAGAAGGTCAAC
CTCATTAGGCACCAGAGGATTCATACAGAGGTAAAACCTTTCCTGTGCCCCGAGTGTGGACGAG
CCTTTGAGTTTAAGTCGCTCCTCACCAGACACCGGAAGACACACACCGGGGAGAAGCCCTATGT
GTGCCCCCAGTGCGGTAGGGGGTTTAGCCAGAAGTTCAACCTCATTGGGCATCAGAGGATTCAT
GCAGGGGAGTTACCTTTTCTGTGTCCTGAGTGTGGGCGTGCATTTGTAAAGAAGGCCACGCTCA
TCCGACACCAGAGGACCCACGCAGGGTGGGAGAAGCCTTACCAGTGCCCCGAGTGTGGACGAAC
CTTTGAGTTTAAATCGCTCCTCACAAGACACCAGAAGATACACACAGGGGAGAAGCCTTATGTG
TGTCCTCAGTGTGGTAGGGGGTTTAGCCAGAAGTTCAACCTCATTGGGCACCAGAAGACGCATA
CAGGGGAAAAGCCCTATGCCTGTCCCCAGTGTGGCCAGCGTTTCAGGCAGAAGTTCAACCTCGT
TAGGCACCAGAGGATTCACACAGGGGAGAAGCCGTTCCTCTGCGCAGAGTGTGGGCGAGCATTT
GGAAAGAAGGTCTCTCTCATTAGACACCAGAGGACCCACGGAGAGGAGAAACCTTACAAGTGCC
CTGAGTGTGGACGAGCCTTTGAGTTTAAGTCTCTCTTCATCAGACACCAGAAGACACACACGGG
GGAGAAGCCCTATGTATGCACCGAGTGTGGCAAGGCTTTTAGCCAAAAGTTCAACCTCATTGGG
CACCAGAGGAGCCATACAGGGGAGAAGCCTTACCTGTGCTCCCAGTGCGGGCGTGCTTTTGGTT
TTAAGTCACTTCTCACCAGACACCAGAGGACACACTCCAAGTAGAAGAGGCTTTTTGTAAACAG
CTTATGTGGGTAGGGAGTGGATGGGATGCCACACCTCACGTCTGACTAGAGGACTCAGTCCAGT
TGGTAGAGAAGCCTTTGGCTTTAACTCTGCCCTCATCAGACATCAGCAGACCTACTCTGGCAAG
AAGCCCTTAAGTGCAGGGATCGTGGGCGTGGCTTCAGCTGGACGTTTCACCTCCACAGACTTAG
GAAGACCCAAGTGTGGGCCATCGGCTCCTAGCCTGAGAGGTGTTTGCCTGACCTGTTGTTTCCT
TTCCCCAGGATCAGGGAGCTGGCAGAAATCACTAGTGAATGTTCCTGGAAATAGAGTAGGGGAA
AAGTCCTTGCTTGTTCATGAAATCATTGGTTTATTGTTTATTATCTTTGGTTAATAGTATGTGT
TAGTTTTCTAGGGCTTCCTAACAAAATACCCCGGACCGTACAGCTTAGGCAAAAGAAATTTACT
CTGCTGTATATATGGAGCCTAGAAGTCCTCTGTCAAACCGGCTCAGGTGTTGCTGTAGCCACAC
CTCCCCGTAGCGGGTGGATGGCTTCCTGATGTGCTGTGCACCTACAGGTCCATCCCTCCTGTAT
ATACTTTCCTGGTGCCTCTCATCCTGGACCACATCCAGATGACCTTGTTTAATCTTGAGTAAAT
GTCCTGCCTCCAAGTCACATCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001414200	(Get FASTA)	NCBI Sequence Viewer
	XP_006253807	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000022932
	ENSRNOP00000022932.5
	ENSRNOP00000102330.1
	ENSRNOP00000111135
	ENSRNOP00000111135.1

RefSeq Acc Id:	XP_006253807 ⟸ XM_006253745
- Peptide Label:	isoform X1
- UniProtKB:	D3Z9A8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAPGLLTTRDKALMAFHDVAVAFSQTEWKLLSPAQRILYREVMLENYSHLVSLGIAFPKPKLIT QLEQGTEPWRDGCLLDLCSAEPRTELEAGLSCPISFASPEVLRVCVLNGSPSQTFPSPPEGGNF QSEAPGCSSNGGGEERDNSDALLQRTSPTRILKTFFSPCQGQMAYWAEGDSKQTDLGLAPEEAV PVLKGPDESASGAVIQGAFPLGLNDVTNLFSPQKHHVYPDCGGGFCQSSDLMKLQRMDGGEKPY SCSECGHQFTQKASLTVHQRKHSGEKPHVCGECGRGFMYVSSLNSHKKIIHSGERPLVCPECGR GFRQKIDLLLHQRTHLDKKPFVCPECGRGFCRKASLLQHRWSHSGDNPFICSVCGRGFRLLSRL LTHQITHSGEKPHVCPDCGQRFGQKGTLMRHQKTHTGEKPYVCRQCGWSFTQKVNLIRHQRIHT EVKPFLCPECGRAFEFKSLLTRHRKTHTGEKPYVCPQCGRGFSQKFNLIGHQRIHAGELPFLCP ECGRAFVKKATLIRHQRTHAGWEKPYQCPECGRTFEFKSLLTRHQKIHTGEKPYVCPQCGRGFS QKFNLIGHQKTHTGEKPYACPQCGQRFRQKFNLVRHQRIHTGEKPFLCAECGRAFGKKVSLIRH QRTHGEEKPYKCPECGRAFEFKSLFIRHQKTHTGEKPYVCTECGKAFSQKFNLIGHQRSHTGEK PYLCSQCGRAFGFKSLLTRHQRTHSK hide sequence

Ensembl Acc Id:

ENSRNOP00000022932 ⟸ ENSRNOT00000022932

RefSeq Acc Id:

NP_001414200 ⟸ NM_001427271

Ensembl Acc Id:

ENSRNOP00000111135 ⟸ ENSRNOT00000133482

Ensembl Acc Id:

ENSRNOP00000102330 ⟸ ENSRNOT00000124749

Protein Domains

C2H2-type KRAB

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3Z9A8-F1-model_v2	AlphaFold	D3Z9A8	1-764	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304631	AgrOrtholog
BioCyc Gene	G2FUF-9953	BioCyc
Ensembl Genes	ENSRNOG00000017092	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000022932	ENTREZGENE
	ENSRNOT00000022932.7	UniProtKB/TrEMBL
	ENSRNOT00000124749.1	UniProtKB/TrEMBL
	ENSRNOT00000133482	ENTREZGENE
	ENSRNOT00000133482.1	UniProtKB/TrEMBL
Gene3D-CATH	6.10.140.140	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	KRAB_dom_sf	UniProtKB/TrEMBL
	Krueppel-associated_box	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
NCBI Gene	306816	ENTREZGENE
PANTHER	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN 169	UniProtKB/TrEMBL
Pfam	KRAB	UniProtKB/TrEMBL
	zf-C2H2	UniProtKB/TrEMBL
PhenoGen	Zfp169	PhenoGen
PROSITE	KRAB	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000017092	RatGTEx
SMART	KRAB	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	Krueppel-associated_box	UniProtKB/TrEMBL
	SSF57667	UniProtKB/TrEMBL
UniProt	A0ABK0L1K7_RAT	UniProtKB/TrEMBL
	A0ABK0LZU8_RAT	UniProtKB/TrEMBL
	D3Z9A8	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Zfp169	zinc finger protein 169	Zfp169_predicted	zinc finger protein 169 (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-30	Zfp169_predicted	zinc finger protein 169 (predicted)	Znf169_predicted		Symbol updated	1299863	APPROVED
2005-01-12	Znf169_predicted	zinc finger protein 169 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD