Advanced Search (OLGA)

Gene: Gprasp3 (G protein-coupled receptor associated sorting protein family member 3) Rattus norvegicus

Analyze

Symbol:

Gprasp3

Name:

G protein-coupled receptor associated sorting protein family member 3

RGD ID:

1303224

Description:

Predicted to enable protein homodimerization activity. Predicted to be involved in learning or memory; negative regulation of neuron apoptotic process; and positive regulation of nervous system development. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Orthologous to human GPRASP3 (G protein-coupled receptor associated sorting protein family member 3); INTERACTS WITH 1,2-dimethylhydrazine; 2,4-dinitrotoluene; 2,6-dinitrotoluene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

basic helix-loop-helix domain containing, class B, 9; basic helix-loop-helix family member B9; Bhlhb9; G protein-coupled receptor associated sorting protein 3; KKPROT; LOC317407; p60TRP; transcription regulator of 60 kDa

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	103,639,366 - 103,644,561 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	103,609,243 - 103,650,463 (+)	Ensembl				GRCr8
mRatBN7.2	X	98,847,591 - 98,854,949 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	98,817,593 - 98,854,545 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	100,985,493 - 100,988,191 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	104,496,103 - 104,498,801 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	102,047,888 - 102,050,587 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	106,359,981 - 106,393,457 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	106,390,759 - 106,393,459 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	106,726,766 - 106,739,896 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	123,149,086 - 123,151,846 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	100,291,299 - 100,293,998 (-)	NCBI		Celera
RGSC_v3.1	X	123,222,518 - 123,225,279 (+)	NCBI
Cytogenetic Map	X	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (EXP)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (EXP)

2,6-dinitrotoluene (EXP)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

all-trans-retinoic acid (ISO)

antirheumatic drug (ISO)

azoxystrobin (EXP)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

cantharidin (ISO)

CGP 52608 (ISO)

chlorpyrifos (EXP)

choline (ISO)

clofibrate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dichloroacetic acid (ISO)

dorsomorphin (ISO)

endosulfan (EXP)

ethanol (ISO)

flutamide (EXP)

folic acid (ISO)

formaldehyde (ISO)

gentamycin (EXP)

glyphosate (EXP)

imidacloprid (EXP)

inulin (ISO)

L-methionine (ISO)

methyl methanesulfonate (ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

perfluorooctanoic acid (ISO)

permethrin (ISO)

phenobarbital (ISO)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

testosterone (ISO)

tetrachloromethane (ISO)

thiabendazole (EXP)

thioacetamide (EXP)

titanium dioxide (ISO)

trichostatin A (ISO)

triphenyl phosphate (ISO)

Triptolide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

troglitazone (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

learning or memory (IEA,ISO)

negative regulation of neuron apoptotic process (IEA,ISO)

positive regulation of dendritic spine morphogenesis (IEA,ISO)

positive regulation of neurogenesis (IEA,ISO)

positive regulation of synapse assembly (IEA,ISO)

Cellular Component

cytoplasm (IEA)

cytosol (IBA,IEA,ISO)

nucleoplasm (IEA,ISO)

nucleus (IBA,IEA)

Molecular Function

protein binding (ISO)

protein homodimerization activity (IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Characterizing the new transcription regulator protein p60TRP.	Heese K, etal., J Cell Biochem 2004 Apr 1;91(5):1030-42.
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:19056867	PMID:21199326

Genomics

Comparative Map Data

Gprasp3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	103,639,366 - 103,644,561 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	X	103,609,243 - 103,650,463 (+)	Ensembl				GRCr8
mRatBN7.2	X	98,847,591 - 98,854,949 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	98,817,593 - 98,854,545 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	X	100,985,493 - 100,988,191 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	104,496,103 - 104,498,801 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	102,047,888 - 102,050,587 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	106,359,981 - 106,393,457 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	106,390,759 - 106,393,459 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	X	106,726,766 - 106,739,896 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	X	123,149,086 - 123,151,846 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	X	100,291,299 - 100,293,998 (-)	NCBI		Celera
RGSC_v3.1	X	123,222,518 - 123,225,279 (+)	NCBI
Cytogenetic Map	X	q32	NCBI

GPRASP3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	102,720,743 - 102,753,540 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	102,720,688 - 102,753,540 (+)	Ensembl			hg38	GRCh38
GRCh37	X	101,975,671 - 102,008,468 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	101,862,310 - 101,894,024 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	X	101,781,798 - 101,813,513	NCBI
Celera	X	102,414,680 - 102,446,406 (+)	NCBI		Celera
Cytogenetic Map	X	q22.1	NCBI
HuRef	X	91,641,229 - 91,672,865 (+)	NCBI		HuRef
CHM1_1	X	101,868,307 - 101,900,034 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	101,165,692 - 101,198,489 (+)	NCBI		T2T-CHM13v2.0

Bhlhb9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	134,742,388 - 134,791,828 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	134,698,343 - 134,791,830 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	X	135,841,639 - 135,891,081 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	135,797,594 - 135,891,081 (+)	Ensembl			mm10	GRCm38
MGSCv37	X	132,420,390 - 132,425,620 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	X	131,235,266 - 131,237,439 (+)	NCBI		MGSCv36	mm8
Celera	X	119,202,603 - 119,207,835 (+)	NCBI		Celera
Cytogenetic Map	X	F1	NCBI
cM Map	X	57.31	NCBI

Gprasp3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955548	233,493 - 235,157 (+)	Ensembl
ChiLan1.0	NW_004955548	230,525 - 236,043 (+)	NCBI	ChiLan1.0	ChiLan1.0

GPRASP3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	102,327,152 - 102,360,738 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	102,330,757 - 102,363,242 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	91,944,691 - 91,978,289 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	102,324,471 - 102,358,183 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	102,353,621 - 102,355,264 (+)	Ensembl			panPan2	panpan1.1

GPRASP3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	76,635,887 - 76,651,465 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	76,636,667 - 76,638,319 (-)	Ensembl			canFam3	CanFam3.1
ROS_Cfam_1.0	X	77,830,292 - 77,845,859 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	77,695,389 - 77,846,736 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	75,380,346 - 75,395,910 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	77,043,280 - 77,058,840 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	76,753,328 - 76,768,896 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Gprasp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	62,370,715 - 62,375,944 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936813	1,099,208 - 1,132,128 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936813	1,099,164 - 1,137,974 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GPRASP3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	83,895,567 - 83,911,568 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	X	83,895,554 - 83,911,573 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	97,835,521 - 97,851,537 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GPRASP3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	90,695,125 - 90,735,910 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	90,732,449 - 90,734,092 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666065	15,532,543 - 15,573,372 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gprasp3
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	X	87,606,361 - 87,611,439 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Gprasp3
17 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	34
Count of miRNA genes:	26
Interacting mature miRNAs:	34
Transcripts:	ENSRNOT00000049375
Prediction methods:	Miranda, Pita, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1598872	Memor14	Memory QTL 14	4.5		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	97528096	142528096	Rat
61430	Cia18	Collagen induced arthritis QTL 18	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	80434318	125434318	Rat
738029	Stresp2	Stress response QTL 2	3.4	0.0004	stress-related behavior trait (VT:0010451)	defensive burying - approach	X	92979612	117740458	Rat
738035	Stresp1	Stress response QTL 1	4.96	0.000011	stress-related behavior trait (VT:0010451)	defensive burying - coping	X	45182909	117740458	Rat
2302047	Pia34	Pristane induced arthritis QTL 34	5.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	19	96916163	141916163	Rat

Markers in Region

RH133247

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	98,849,160 - 98,850,651 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	106,389,107 - 106,390,597	NCBI	Rnor6.0
Rnor_5.0	X	106,729,626 - 106,731,116	UniSTS	Rnor5.0
RGSC_v3.4	X	123,147,434 - 123,148,924	UniSTS	RGSC3.4
Celera	X	100,294,160 - 100,295,650	UniSTS
Cytogenetic Map	X	q35	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_207611	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017602068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF497483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474117	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ233074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000049375 ⟹ ENSRNOP00000042638

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,635,078 - 103,649,736 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,847,713 - 98,854,545 (+)	Ensembl
Rnor_6.0 Ensembl	X	106,390,759 - 106,393,459 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000103691 ⟹ ENSRNOP00000089209

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	98,848,164 - 98,854,545 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108351 ⟹ ENSRNOP00000080161

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,632,737 - 103,650,463 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,817,593 - 98,854,545 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110806 ⟹ ENSRNOP00000089980

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	X	103,609,243 - 103,649,736 (+)	Ensembl
mRatBN7.2 Ensembl	X	98,848,023 - 98,854,545 (+)	Ensembl

RefSeq Acc Id:

NM_207611 ⟹ NP_997494

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	103,639,366 - 103,644,561 (+)	NCBI
mRatBN7.2	X	98,847,732 - 98,852,927 (+)	NCBI
Rnor_6.0	X	106,390,759 - 106,393,457 (+)	NCBI
Rnor_5.0	X	106,726,766 - 106,739,896 (-)	NCBI
RGSC_v3.4	X	123,149,086 - 123,151,846 (+)	RGD
Celera	X	100,291,299 - 100,293,998 (-)	RGD

Sequence:

show sequence

AGTTACCAAGTATAAAGATACCAGCCTGGAACAGAGAACTAAGGATAAGACTGGACAGGTGTAT
ATAACTGTGCTTCAACCATGACTGGCTCAAAGAATAAGGCTCGGGCTCAGGCTAAACTGGAAAA
GAGGGCAAGTGCACAAGCCAAAGCTGCAGCAGAGAGAGAGGCTGCTAATGCAGGCAGAGGTGCA
GGCAAAAACCGGGACAAAGGGAAGGGTAAGGCAGGCTCTAAAACAGATGCAGTGGCAGAGGCGA
AGGCGGGCTCTAAGAGCAAGGTAGTTGCTGAGACAAAAGAAGGAGCAAGACCAGAATCTAAGGC
TGTAGCAAAAGGCACATCAGATTTCAACCATAAGGCTGAGAACAAGTACGCTAGATCCGCACGT
AAAGATAAGCCCAGTAGTGATAGCTGGTTTTGGGCTGGAGAAGATTCTGGTATCAATTCCTGGT
TCTGGAAGGGAGAAGAGGTTAGTAACAATTCTGTTGCCAAGTGTGAAAATAAACCTAGTACTAG
TATCCAGGCCCGTGTGGAGGAGCACACGCCTAGAACCAGCCACAAGTCTAGGTCAGGAGCTGAG
GAAGAGGAGGAAGAGAATGTTATAGGGAACTGGTTTTGGGAAGGAGATGACACTGGTTTTGATT
CTGATCCTAAACCTGTGTTCAAAATAGTAAAACCTCAGCCAGTAGATGAAATAAATGAAAAGGA
TAGGCCAAAGGACTGGTCCGAGGTAACTATCTGGCCCAAAGCTCCTGCTGTAACTCCAGCAGTG
TTAGGTTATAGATCTCAGGACTCATCTGAGGGAAGGCCCTCTTCATATATTGTTCTGGCCTCAA
ATGAAGAGGAAACTTCAACAACCTGTACTAAGAATACTCGTTCAAGCCTCCAGCCTATACCTGA
GTATCCATTTGGATCTGATCCTTGCATACAGACCTTAGATGAAATTAGACAGCAAATCAAGATC
AGAGAAGAGAATGGCATCAAGCCCTTTGCTTGCCCTTGCAAAATGGAGTGCTATTTGGATTCTC
CGGAATTTGAAAAGCTTGTTAACATACTTAAGTCAACTACTGATCCCCTTATTCATAAAATAGC
ACAGATTGCAATGGGTATCCATAAAGTTCATCCGTTTGCCCAGGAATTCATTAATGAAGTGGGT
GTGGTGACGCTTATTGAAAGCTTGCTCAGTTTTTCTTCCCCTGAAGTTAGTATAAAAAAGGCTG
TTATTACTCTGAACTCTTCCGGGGATGACAGACAACAAATGGTTGAATTTCATGTTAAGCATAT
GTGTAAAGAAACGGTATCTTTCCCCTTGAACTCACCTGGCCAGCAATCTGGATTAAAGATAATA
GGGCAGCTGACGACTGAGTCTGTCCATCACTACATTGTAGTTAGCTACTTTTCAGAGCTTTTCC
ATTTGCTGTCCCAGGGAAATCGTAAGACTAGGAATCTTGTTTTGAAAGTATTTTTGAATATGTC
TGAAAATCCCAAGGCAGCCAGAGATATGATAAATATGAAGGCATTAGCAGCATTAAAACTCATC
TTTAACCAAAAAGAGGCAAAAGCCAATCTTGTGAGTGCTGTGGCCATCTTTATTAACATAAAGG
AGCATATTAGAAAGGGCTCAATTGTAGTAGTTGATCACTTGAGTTACAATACTCTTACTGCCAT
ATTCCGTGAAGTTAAAGGGATTATTGAAAGAATGTAAAATGACCAAGAAATTGAAGAGAACACT
GAACAGTGTCCAAAATCTGATTGGCTGTACATTCCCAAAGAGTTTTGCATAATATTTTGGTAAT
TACTGCTCACACATTTTTGTCTTAACATCTTTTACATATTATTACCTGTGGCAGGTTCTAGATC
AAAGCTGGAACATTTTTGATGTATCAAATGAATATTACATCTTGAGATAAAAAGTTTGGTGATT
TCTATCTTATCTAGATTAGCAGATTTTAACATTTTACTTAAGGAAACTGATCCAACTCTCAAAA
GTACAGTGTCTTGAGGAATAGTATCTGCTTAGGTCTGGTTGTGGCTTCAGGTAGCAAAAAGAAA
CTAATGGGCTTGGGATCTAGTTACAGAAATAAGGCATATGGAAATAAAGATATGTGATGGTACT
TACACTGTGTGTGTGTACATGATATAAACATATATATGCCTATTGCCAAATGTGTACTCTTGAC
TCAAAAAGGAGGGAGGTCACTATACGCTATTAAATAGAAGAGTGATTTCTATATCCCTCTTTAT
CCAACTGCATCAAACATTTCACTGAAGAATACAGAATGGCCCTGAAGTATACAAATCTATAATA
TATTCATTTTAAAATTTGCTTTTATAACTAAAATTCCAATTTTACACTATTTTATCTGTCACCT
CAAAGAATAAAAAGGTAAGCATGAAAAGAATATATTTTTATTATCAGTTGCTATTACACACTTA
TATTGGCATATTTTACAACTTTTATTTTTTATGGTGATCCTGTGAACTAGTTAACTCATTTTTT
TATCTCACTATACCACTTTTACACTCATTCCCTCTTTTAGGTGATAGCCTTCACAGCACAGAGA
CTGTTTAGGTTATAGTAGTAGTTTAAATTTCTGATGAATAATGTCCCCTACCAGGTTAACAGCT
ATTGGCTTCCTTCACATTCAGGTTGACTAGTCAGTTATCTGGCTAGATGCCAGATGGAGTGTCT
GAAATGAGTACTT

hide sequence

Protein Sequences


Protein RefSeqs	NP_997494	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAQ07247	(Get FASTA)	NCBI Sequence Viewer
	EDL85819	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000042638
	ENSRNOP00000042638.4
	ENSRNOP00000080161.1
	ENSRNOP00000089209.1
	ENSRNOP00000089980.1
GenBank Protein	Q71HP2	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_997494 ⟸ NM_207611

- UniProtKB:

Q71HP2 (UniProtKB/Swiss-Prot), A6KT33 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MTGSKNKARAQAKLEKRASAQAKAAAEREAANAGRGAGKNRDKGKGKAGSKTDAVAEAKAGSKS
KVVAETKEGARPESKAVAKGTSDFNHKAENKYARSARKDKPSSDSWFWAGEDSGINSWFWKGEE
VSNNSVAKCENKPSTSIQARVEEHTPRTSHKSRSGAEEEEEENVIGNWFWEGDDTGFDSDPKPV
FKIVKPQPVDEINEKDRPKDWSEVTIWPKAPAVTPAVLGYRSQDSSEGRPSSYIVLASNEEETS
TTCTKNTRSSLQPIPEYPFGSDPCIQTLDEIRQQIKIREENGIKPFACPCKMECYLDSPEFEKL
VNILKSTTDPLIHKIAQIAMGIHKVHPFAQEFINEVGVVTLIESLLSFSSPEVSIKKAVITLNS
SGDDRQQMVEFHVKHMCKETVSFPLNSPGQQSGLKIIGQLTTESVHHYIVVSYFSELFHLLSQG
NRKTRNLVLKVFLNMSENPKAARDMINMKALAALKLIFNQKEAKANLVSAVAIFINIKEHIRKG
SIVVVDHLSYNTLTAIFREVKGIIERM

hide sequence

Ensembl Acc Id:

ENSRNOP00000042638 ⟸ ENSRNOT00000049375

Ensembl Acc Id:

ENSRNOP00000089980 ⟸ ENSRNOT00000110806

Ensembl Acc Id:

ENSRNOP00000080161 ⟸ ENSRNOT00000108351

Ensembl Acc Id:

ENSRNOP00000089209 ⟸ ENSRNOT00000103691

Protein Domains

Armadillo repeat-containing

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q71HP2-F1-model_v2	AlphaFold	Q71HP2	1-539	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1303224	AgrOrtholog
BioCyc Gene	G2FUF-1644	BioCyc
Ensembl Genes	ENSRNOG00000003191	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000049375	ENTREZGENE
	ENSRNOT00000049375.6	UniProtKB/Swiss-Prot
	ENSRNOT00000103691.1	UniProtKB/Swiss-Prot
	ENSRNOT00000108351.1	UniProtKB/Swiss-Prot
	ENSRNOT00000110806.1	UniProtKB/Swiss-Prot
Gene3D-CATH	1.25.10.10	UniProtKB/Swiss-Prot
InterPro	ARM-like	UniProtKB/Swiss-Prot
	ARM-rpt_dom	UniProtKB/Swiss-Prot
	ARM-type_fold	UniProtKB/Swiss-Prot
	BHLHb9/GASP-1/GASP-2	UniProtKB/Swiss-Prot
KEGG Report	rno:317407	UniProtKB/Swiss-Prot
NCBI Gene	317407	ENTREZGENE
PANTHER	PROTEIN BHLHB9	UniProtKB/Swiss-Prot
	PTHR46414	UniProtKB/Swiss-Prot
Pfam	Arm_2	UniProtKB/Swiss-Prot
PhenoGen	Gprasp3	PhenoGen
RatGTEx	ENSRNOG00000003191	RatGTEx
Superfamily-SCOP	SSF48371	UniProtKB/Swiss-Prot
UniProt	A6KT33	ENTREZGENE, UniProtKB/TrEMBL
	BHLH9_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-07-29	Gprasp3	G protein-coupled receptor associated sorting protein family member 3	Bhlhb9	basic helix-loop-helix family member B9	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2017-03-09	Bhlhb9	basic helix-loop-helix family member B9	Bhlhb9	basic helix-loop-helix domain containing, class B, 9	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-02-21	Bhlhb9	basic helix-loop-helix domain containing, class B, 9	LOC317407	KKPROT	Symbol and Name updated	1299863	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message