Rpl29l3 (ribosomal protein L29 like 3) - Rat Genome Database

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Gene: Rpl29l3 (ribosomal protein L29 like 3) Rattus norvegicus
Analyze
Symbol: Rpl29l3
Name: ribosomal protein L29 like 3
RGD ID: 11501100
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L29 pseudogene; 60S ribosomal protein L29-like; large ribosomal subunit protein eL29-like; LOC108348937
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81955,663,555 - 55,664,231 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.21938,754,265 - 38,754,899 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.01940,864,922 - 40,865,678 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Celera1938,147,750 - 38,148,508 (+)NCBICelera
Cytogenetic Map19q12NCBI
JBrowse:




References

Genomics


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)191922068964220689Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032907674246245Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)194622677874246245Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)193236531174246245Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)193628974246245Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)192409397369093973Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191083361874246245Rat
2303628Vencon9Ventilatory control QTL 90.005respiration trait (VT:0001943)minute ventilation (CMO:0000132)192318858668188586Rat
2313395Anxrr26Anxiety related response QTL 26aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)194438513474246245Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)193253961574246245Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)193177788874246245Rat
1554318Bmd5Bone mineral density QTL 512.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)192318858668188586Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)192010930665109306Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19219431774246245Rat
1549835Tcas7Tongue tumor susceptibility QTL 70.001tongue integrity trait (VT:0010553)squamous cell carcinoma of the head and neck tumor number (CMO:0001876)194172254674246245Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19219431774246245Rat


Expression

RNA-SEQ Expression

circulatory system
ectoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
sensory system
visual system
1 4 1 9 2 6 7 4 4

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_039098242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_039098242   ⟹   XP_038954170
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81955,663,555 - 55,664,231 (+)NCBI
mRatBN7.21938,754,265 - 38,754,899 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038954170 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_038954170   ⟸   XM_039098242


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-5685 BioCyc
NCBI Gene LOC108348937 ENTREZGENE
PhenoGen Rpl29l3 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-19 Rpl29l3  ribosomal protein L29 like 3  LOC108348937  60S ribosomal protein L29 pseudogene  Symbol and Name Changed 1299863 APPROVED
2016-08-02 LOC108348937  60S ribosomal protein L29 pseudogene      Symbol and Name status set to provisional 70820 PROVISIONAL