RGD:8625890 Rat Genome Database

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Variant: RGD:8625890 -  Homo sapiens

RGD ID: 8625890
ClinVar ID: CV81014
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: LOC107986366  MCC  TSSK1B  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 5 112,770,048
GRCh38 5 113,434,351
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001085377.1:c.171-49139G>A
NM_032028.3:c.489G>A
NG_012265.1:g.59480G>A
NC_000005.10:g.113434351C>T
More... 		intron|synonymous variant|intron variant not provided Malignant melanoma, somatic

Variant Details
Variant Transcripts
Gene Symbol:STK22D
Accession:NM_032028
Location:EXON
Amino Acid Prediction: R to R (synonymous)
Amino Acid Position: 163
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MDDAAVLKRRGYLLGINLGEGSYAKVKSAYSERLKFNVAIKIIDRKKAPADFLEKFLPREIEILAMLNHCSIIKTYEIFE
TSHGKVYIVMELAVQGDLLELIKTRGALHEDEARKKFHQLSLAIKYCHDLDVVHRDLKCDNLLLDKDFNIKLSDFSFSKR
CLRDDSGRMALSKTFCGSPAYAAPEVLQGIPYQPKVYDIWSLGVILYIMVCGSMPYDDSNIKKMLRIQKEHRVNFPRSKH
LTGECKDLIYHMLQPDVNRRLHIDEILSHCWMQPKARGSPSVAINKEGESSRGTEPLWTPEPGSDKKSATKLEPEGEAQP
QAQPETKPEGTAMQMSRQSEILGFPSKPSTMETEEGPPQQPPETRAQ*

Gene Symbol:MCC
Accession:NM_001085377
Location:INTRON

Gene Symbol:MCC
Accession:NM_002387
Location:INTRON

Gene Symbol:LOC107986366
Accession:XR_001742459
Location:INTRON;NON-CODING

Variant Samples