RGD:26902406 Rat Genome Database

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Variant: RGD:26902406 -  Homo sapiens

RGD ID: 26902406
RS ID: rs1845952054
ClinVar ID: CV851236
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: TSC1  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 9 135,786,835
GRCh38 9 132,911,448
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
LRG_486t1:c.1029+5G>A
NM_000368.5:c.1029+5G>A
NM_001162426.2:c.1029+5G>A
NM_001362177.2:c.666+5G>A
More... 		12/13/2019 intron variant uncertain significance Cancer predisposition; Hereditary Cancer Syndrome; Hereditary neoplastic syndrome; Neoplastic Syndromes, Hereditary; Tumor predisposition
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:TSC1
Accession:NM_001406629
Location:5UTRS;EXON

Gene Symbol:TSC1
Accession:NM_001406630
Location:5UTRS;EXON

Gene Symbol:TSC1
Accession:NM_001162427
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001162426
Location:INTRON

Gene Symbol:TSC1
Accession:NM_000368
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:TSC1
Accession:XM_011518979
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001362177
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406620
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406618
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406625
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406621
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406617
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406613
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406612
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406610
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406627
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406603
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406609
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406597
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406602
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406606
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406592
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406600
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406595
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406619
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406598
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406607
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406593
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406596
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406622
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406614
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406611
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406628
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406626
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406604
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406608
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406601
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406605
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406624
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406616
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406623
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406615
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406599
Location:INTRON

Gene Symbol:TSC1
Accession:NM_001406594
Location:INTRON

Gene Symbol:TSC1
Accession:NR_176216
Location:INTRON;NON-CODING

Gene Symbol:TSC1
Accession:NR_176217
Location:INTRON;NON-CODING

Gene Symbol:TSC1
Accession:NR_176214
Location:INTRON;NON-CODING

Gene Symbol:TSC1
Accession:NR_176218
Location:INTRON;NON-CODING

Gene Symbol:TSC1
Accession:NR_176215
Location:INTRON;NON-CODING

Variant Samples
Additional References at PubMed
PMID:9536098   PMID:17576681   PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV001035955 CLINVAR
  RCV002379480 CLINVAR
dbSNP (RS) rs1845952054 CLINVAR
MedGen C0027672 CLINVAR
  C1854465 CLINVAR
NCBI Gene TSC1 CLINVAR
OMIM 191100 CLINVAR
  605284 CLINVAR
SNOMED CT 699346009 CLINVAR