RGD:155947085 Rat Genome Database

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Variant: RGD:155947085 -  Homo sapiens

RGD ID: 155947085
ClinVar ID: CV2234766
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: ATF3  
Reference Nucleotide: T
Variant Nucleotide: C
Position
Assembly Chr Position
GRCh37 1 212,788,397
GRCh38 1 212,615,055
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001206484.3:c.-127-11T>C
NM_001206488.3:c.-138T>C
NM_001030287.4:c.34T>C
NM_001040619.3:c.34T>C
More... 		09/09/2021 5 prime utr variant uncertain significance AllHighlyPenetrant

Variant Details
Variant Transcripts
Gene Symbol:ATF3
Accession:NM_001206488
Location:5UTRS;EXON

Gene Symbol:ATF3
Accession:NM_001206484
Location:5UTRS;INTRON

Gene Symbol:ATF3
Accession:XM_005273146
Location:EXON
Amino Acid Prediction: S to P (nonsynonymous)
Amino Acid Position: 12
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MMLQHPGQVSAPEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSSALESVTVSDRPLGVSITKAE
VAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNG
RTPEDERNLFIQQIKEGTLQS*

Gene Symbol:ATF3
Accession:NM_001674
Location:EXON
Amino Acid Prediction: S to P (nonsynonymous)
Amino Acid Position: 12
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MMLQHPGQVSAPEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSSALESVTVSDRPLGVSITKAE
VAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNG
RTPEDERNLFIQQIKEGTLQS*

Gene Symbol:ATF3
Accession:XM_011509579
Location:EXON
Amino Acid Prediction: S to P (nonsynonymous)
Amino Acid Position: 12
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MMLQHPGQVSAPEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSSALESVTVSDRPLGVSITKAE
VAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNG
RTPEDERNLFIQQIKEGTLQS*

Gene Symbol:ATF3
Accession:NM_001206486
Location:EXON
Amino Acid Prediction: S to P (nonsynonymous)
Amino Acid Position: 12
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MMLQHPGQVSAPEEELRFAIQNKHLCHRMSSALESVTVSDRPLGVSITKAEVAPEEDERKKRRRERNKIAAAKCRNKKKE
KTECLQKLPRPFWVQKTCIWAVDSCK*

Gene Symbol:ATF3
Accession:NM_001040619
Location:EXON
Amino Acid Prediction: S to P (nonsynonymous)
Amino Acid Position: 12
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MMLQHPGQVSAPEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSSALESVTVSDRPLGVSITKAE
VAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKLPRPFWVQKTCIWAVDSCK*

Gene Symbol:ATF3
Accession:NM_001030287
Location:EXON
Amino Acid Prediction: S to P (nonsynonymous)
Amino Acid Position: 12
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MMLQHPGQVSAPEVSASAIVPCLSPPGSLVFEDFANLTPFVKEELRFAIQNKHLCHRMSSALESVTVSDRPLGVSITKAE
VAPEEDERKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQIEELKNEKQHLIYMLNLHRPTCIVRAQNG
RTPEDERNLFIQQIKEGTLQS*

Gene Symbol:ATF3
Accession:XM_047421211
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV004111211 CLINVAR
MedGen CN169374 CLINVAR
NCBI Gene ATF3 CLINVAR
OMIM 603148 CLINVAR