RGD:15197602 Rat Genome Database

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Variant: RGD:15197602 -  Homo sapiens

RGD ID: 15197602
RS ID: rs140742906
ClinVar ID: CV777594
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: CASTOR3P  STAG3  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 7 99,799,496
GRCh38 7 100,201,873
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001282718.2:c.2127+7G>A
NM_001282716.1:c.2301+7G>A
NM_001282717.2:c.2301+7G>A
NM_001375438.1:c.2301+7G>A
More... 		01/24/2018 3 prime utr variant|intron variant benign none provided

Variant Details
Variant Transcripts
Gene Symbol:CASTOR3P
Accession:NR_028040
Location:EXON;NON-CODING

Gene Symbol:CASTOR3P
Accession:NR_166147
Location:EXON;NON-CODING

Gene Symbol:CASTOR3P
Accession:NR_028039
Location:EXON;NON-CODING

Gene Symbol:STAG3
Accession:XM_017011687
Location:INTRON

Gene Symbol:STAG3
Accession:NM_001282717
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419794
Location:INTRON

Gene Symbol:STAG3
Accession:NM_001282716
Location:INTRON

Gene Symbol:STAG3
Accession:NM_001282718
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419793
Location:INTRON

Gene Symbol:STAG3
Accession:XM_017011685
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419792
Location:INTRON

Gene Symbol:STAG3
Accession:NM_001375438
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419787
Location:INTRON

Gene Symbol:STAG3
Accession:XM_017011684
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419786
Location:INTRON

Gene Symbol:STAG3
Accession:XM_017011686
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419791
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419789
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419798
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419788
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419795
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419796
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419790
Location:INTRON

Gene Symbol:STAG3
Accession:XM_017011683
Location:INTRON

Gene Symbol:STAG3
Accession:NM_012447
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419797
Location:INTRON

Gene Symbol:CASTOR3P
Accession:NR_028038
Location:INTRON;NON-CODING

Variant Samples
Additional References at PubMed
PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV000956511 CLINVAR
dbSNP (RS) rs140742906 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene STAG3 CLINVAR
OMIM 608489 CLINVAR