RGD:150513038 Rat Genome Database

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Variant: RGD:150513038 -  Homo sapiens

RGD ID: 150513038
RS ID: rs1052482
ClinVar ID: CV1213083
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: CASTOR3P  STAG3  
Reference Nucleotide: T
Variant Nucleotide: C
Position
Assembly Chr Position
GRCh37 7 99,811,836
GRCh38 7 100,214,213
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001282716.1:c.*198A>T
NM_001282717.2:c.*198A>T
NM_001282718.2:c.*198A>T
NM_001375438.1:c.*198A>T
More... 		10/17/2019 3 prime utr variant benign none provided

Variant Details
Variant Transcripts
Gene Symbol:STAG3
Accession:NM_001282718
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:XM_047419789
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:NM_001375438
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:NM_001282717
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:XM_047419790
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:XM_047419788
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:NM_012447
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:XM_047419796
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:XM_047419791
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:NM_001282716
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:XM_047419794
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:XM_047419795
Location:3UTRS;EXON

Gene Symbol:STAG3
Accession:XM_017011687
Location:INTRON

Gene Symbol:STAG3
Accession:XM_017011686
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419792
Location:INTRON

Gene Symbol:STAG3
Accession:XM_017011684
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419793
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419786
Location:INTRON

Gene Symbol:STAG3
Accession:XM_017011685
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419787
Location:INTRON

Gene Symbol:STAG3
Accession:XM_017011683
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419798
Location:INTRON

Gene Symbol:STAG3
Accession:XM_047419797
Location:INTRON

Gene Symbol:CASTOR3P
Accession:NR_028040
Location:INTRON;NON-CODING

Gene Symbol:CASTOR3P
Accession:NR_028039
Location:INTRON;NON-CODING

Gene Symbol:CASTOR3P
Accession:NR_028038
Location:INTRON;NON-CODING

Gene Symbol:CASTOR3P
Accession:NR_166147
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV001598316 CLINVAR
dbSNP (RS) rs1052482 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene STAG3 CLINVAR
OMIM 608489 CLINVAR