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Strain Registration

Strain: SS.LEW-(D1Mgh7-D1Mco41)/Jr

Symbol: SS.LEW-(D1Mgh7-D1Mco41)/Jr
Strain: SS.LEW-(D1Mgh7-D1Mco41)
Substrain: Jr
RGD ID: 734471
Citation ID: RRID:RGD_734471
Ontology ID: RS:0000869
Also Known As: Chr1 X 8; SS.LEW-(D1Mgh7-D1Mco41)/Jr
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio, USA
Description: This is a congenic substrain derived from SS.LEW-(D1Mco2-D1Mco35)/Jr. A 71 cM fragment of LEW chr 1 was introgressed into SS background.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21106,047,847 - 221,920,075RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01113,593,576 - 242,177,304RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01114,600,888 - 249,451,438RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41106,445,165 - 227,693,454RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Localization of a blood pressure QTL on rat chromosome 1 using dahl rat congenic strains Saad Y, etal., Physiol Genomics 1999 Nov 11;1(3):119-25.

Region

Position Markers

Flank 1 / 1 (D1Mgh7)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21106,047,847 - 106,047,988 (+)MAPPER
Rnor_6.01113,593,576 - 113,593,716NCBI
Rnor_5.01114,600,888 - 114,601,028UniSTS
RGSC_v3.41106,445,166 - 106,445,306UniSTS
RGSC_v3.41106,445,165 - 106,445,306RGD
RGSC_v3.11106,523,508 - 106,523,649RGD
Celera1100,289,873 - 100,290,013UniSTS
RH 3.4 Map1940.7RGD
RH 3.4 Map1940.7UniSTS
SHRSP x BN Map153.8299UniSTS
SHRSP x BN Map153.8299RGD
FHH x ACI Map153.4RGD
Cytogenetic Map1 RGD

Flank 2 / 1 (D1Mco41)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21221,919,753 - 221,920,075 (+)MAPPER
Rnor_6.01242,176,983 - 242,177,304NCBI
Rnor_5.01249,451,117 - 249,451,438UniSTS
RGSC_v3.41227,693,132 - 227,693,454RGD
RGSC_v3.41227,693,133 - 227,693,454UniSTS
RGSC_v3.11227,857,155 - 227,857,477RGD
Celera1219,129,755 - 219,130,078UniSTS
Cytogenetic Map1q51UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease Blood pressure is significantly lower than the SS rats. 61514