RH140637 Marker Search Result - Rat Genome Database

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Marker: RH140637

Symbol: RH140637
Previously known as: AA818623; 
RGD ID: 5033925
Expected Size: 212 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.225,190,510 - 5,190,722 (+)MAPPERmRatBN7.2
Rnor_6.022,457,326 - 2,457,537NCBIRnor6.0
Rnor_5.022,450,494 - 2,450,705UniSTSRnor5.0
RGSC_v3.422,726,126 - 2,726,337UniSTSRGSC3.4
Celera21,663,078 - 1,663,289UniSTS
Cytogenetic Map2q11UniSTS
Is Marker For: Genes:   Ell2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CTAGCTTGTTTGGTCCCGAGAA
Reverse Primer GTGTCTCCGAGTCCCTGAGAAT
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
7532700LOC102548988uncharacterized LOC102548988251653675190944Rat
1309296Ell2elongation factor for RNA polymerase II 2251893755258781Rat

Nucleotide Sequences
GenBank Nucleotide CH473955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 309918 UniSTS
UniSTS 222706 UniSTS