bac5366T Marker Search Result - Rat Genome Database

Symbol:

bac5366T

Previously known as:

RGD ID:

1780942

Expected Size:

208 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	5	140,362,911 - 140,363,118	UniSTS	GRCh37
Build 36	5	140,343,095 - 140,343,302	RGD	NCBI36
Celera	5	136,439,695 - 136,439,902	RGD
Cytogenetic Map	5	q31	UniSTS
HuRef	5	135,507,626 - 135,507,833	UniSTS

Is Marker For:

Genes: PCDHA4 PCDHA3 PCDHA2 PCDHAC2 PCDHA8 PCDHA13 PCDHA12 PCDHA6 PCDHA9 PCDHA10 PCDHA1 PCDHAC1 PCDHA5 PCDHACT PCDHA11 PCDHA@ PCDHA7

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	CATACAATGTACTTGGCACAGTGTC
Reverse Primer	CCTATCACTAAAGCAGGGTCATGT

Region

Nucleotide Sequences


GenBank Nucleotide	AC004776	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC010223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003500	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001613.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL301909.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL582980	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976330.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message