GDB:176981 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: GDB:176981

Symbol: GDB:176981
Previously known as:
RGD ID: 1740967
Expected Size: 847 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711116,701,587 - 116,702,459UniSTSGRCh37
Build 3611116,206,797 - 116,207,669RGDNCBI36
Celera11113,859,402 - 113,860,261RGD
Cytogenetic Map11q23.3UniSTS
HuRef11112,633,860 - 112,634,717UniSTS
Is Marker For: Genes:   APOC3  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GAGTCCCAGGTGGCCCAGCAGGCCAG
Reverse Primer GTCCACCACAAAACTGGTCCCTGGTG
 

Region

Nucleotide Sequences
GenBank Nucleotide AC007707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC087065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP003070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AP006216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY422951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY555191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001619.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF444950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  J00098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976378.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X01392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X03120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 345 UniSTS
UniSTS GDB:176981 UniSTS SSLP Pipeline