STS-N90879 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: STS-N90879

Symbol: STS-N90879
Previously known as:
RGD ID: 1648167
Expected Size: 214 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371738,077,302 - 38,077,515UniSTSGRCh37
Build 361735,330,828 - 35,331,041RGDNCBI36
Celera1734,737,562 - 34,737,775RGD
Cytogenetic Map17q12UniSTS
HuRef1733,871,304 - 33,871,517UniSTS
GeneMap99-GB4 RH Map17304.49UniSTS
Is Marker For: Genes:   ORMDL3  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AACATGTTGCCCTTTTATTTGC
Reverse Primer ATTTTGAAAAGGTGTGGGTCC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_139280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC090844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF373101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK074811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK075212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC071833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001625.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR589878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR936851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR936885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR938745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR954268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL294936.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976397.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 94103 UniSTS
UniSTS STS-N90879 UniSTS SSLP Pipeline