Smug1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 7 | 136,166,157 - 136,177,673 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 134,288,565 - 134,302,179 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 134,287,675 - 134,297,226 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 136,045,289 - 136,047,414 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 138,274,666 - 138,276,791 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 138,260,724 - 138,262,849 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 144,774,155 - 144,788,333 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 144,774,160 - 144,778,656 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 142,560,270 - 142,569,924 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 142,064,428 - 142,066,553 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 142,144,616 - 142,151,752 (-) | NCBI | | | | | Celera | 7 | 130,715,767 - 130,717,892 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | q36 | NCBI | | | | |
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SMUG1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 54,158,235 - 54,188,985 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 54,121,277 - 54,189,008 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 54,574,150 - 54,582,769 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 52,861,519 - 52,869,024 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 12 | 54,226,170 - 54,233,675 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q13.13 | NCBI | | | | | HuRef | 12 | 51,611,811 - 51,620,446 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 54,540,762 - 54,549,526 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 54,119,277 - 54,154,492 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Smug1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 15 | 103,061,717 - 103,077,360 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 15 | 103,061,717 - 103,075,519 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 15 | 103,153,290 - 103,168,939 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 15 | 103,153,290 - 103,167,092 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 15 | 102,983,721 - 102,993,715 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 15 | 102,981,324 - 102,991,318 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 15 | 105,314,542 - 105,324,536 (-) | NCBI | | Celera | | | Cytogenetic Map | 15 | F3 | NCBI | | | | | cM Map | 15 | 58.2 | NCBI | | | | |
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Smug1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955458 | 1,431,721 - 1,447,292 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955458 | 1,432,988 - 1,449,019 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SMUG1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 39,991,866 - 39,999,340 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 39,988,635 - 39,996,093 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 34,564,624 - 34,572,063 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 35,288,412 - 35,296,670 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 35,288,412 - 35,296,670 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SMUG1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 27 | 1,086,675 - 1,093,175 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 1,089,808 - 1,111,129 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 45,157,542 - 45,164,017 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 1,088,178 - 1,094,647 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 1,088,357 - 1,235,362 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 1,107,011 - 1,113,490 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 1,088,345 - 1,094,825 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 45,561,546 - 45,568,018 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Smug1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404945 | 61,762,394 - 61,796,876 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936512 | 11,395,834 - 11,402,377 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936512 | 11,395,513 - 11,416,426 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SMUG1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 5 | 19,398,252 - 19,412,648 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 19,375,244 - 19,412,656 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 20,035,790 - 20,050,156 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SMUG1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 50,292,780 - 50,307,828 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 50,289,154 - 50,300,492 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 195,741,787 - 195,751,095 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Smug1 (Heterocephalus glaber - naked mole-rat) |
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