Trim40 (tripartite motif-containing 40) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Trim40 (tripartite motif-containing 40) Rattus norvegicus
Analyze
Symbol: Trim40
Name: tripartite motif-containing 40
RGD ID: 1359645
Description: Predicted to enable ubiquitin protein ligase activity. Involved in negative regulation of NF-kappaB transcription factor activity and negative regulation of cell growth. Predicted to be part of IkappaB kinase complex. Predicted to be active in cytoplasm. Orthologous to human TRIM40 (tripartite motif containing 40); INTERACTS WITH bisphenol A; linsidomine; 2,3,7,8-tetrachlorodibenzodioxine (ortholog).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: E3 ubiquitin ligase TRIM40; probable E3 NEDD8-protein ligase; RING finger protein 35; Rnf35; tripartite motif protein 40; tripartite motif-containing protein 40; tripartite motif-containing protein 40-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8201,680,554 - 1,691,123 (+)NCBIGRCr8
mRatBN7.2201,676,114 - 1,685,906 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl201,676,270 - 1,685,214 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx201,729,830 - 1,738,396 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0201,733,332 - 1,741,894 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0201,673,911 - 1,682,490 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0202,169,674 - 2,178,477 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl202,169,545 - 2,178,601 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0204,205,817 - 4,216,051 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4201,768,482 - 1,777,393 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1201,768,481 - 1,777,393 (+)NCBI
Celera202,385,041 - 2,394,038 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Trim40Ratmegacolon  ISOTRIM40 (Homo sapiens)8554872ClinVar Annotator: match by term: MegacolonClinVarPMID:21681106
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Trim40Ratirritant dermatitis  ISOTRIM40 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:27258892

1 to 16 of 16 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Trim40Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOTrim40 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of TRIM40 mRNACTDPMID:21570461
Trim40Ratarsane affects methylationISOTRIM40 (Homo sapiens)6480464Arsenic affects the methylation of TRIM40 geneCTDPMID:25304211
Trim40Ratarsenic atom affects methylationISOTRIM40 (Homo sapiens)6480464Arsenic affects the methylation of TRIM40 geneCTDPMID:25304211
Trim40Ratbenzo[a]pyrene increases expressionISOTRIM40 (Homo sapiens)6480464Benzo(a)pyrene results in increased expression of TRIM40 mRNACTDPMID:22316170
Trim40Ratbenzo[a]pyrene increases methylationISOTRIM40 (Homo sapiens)6480464Benzo(a)pyrene results in increased methylation of TRIM40 exon and Benzo(a)pyrene results in increased methylation of TRIM40 promoterCTDPMID:27901495
Trim40Ratbenzo[a]pyrene affects methylationISOTRIM40 (Homo sapiens)6480464Benzo(a)pyrene affects the methylation of TRIM40 3' UTRCTDPMID:27901495
Trim40Ratbisphenol A decreases expressionEXP 6480464bisphenol A results in decreased expression of TRIM40 mRNACTDPMID:25181051
Trim40Ratbisphenol A decreases methylationISOTRIM40 (Homo sapiens)6480464bisphenol A results in decreased methylation of TRIM40 geneCTDPMID:31601247
Trim40Ratbisphenol A multiple interactionsISOTRIM40 (Homo sapiens)6480464[bisphenol A co-treated with Fulvestrant] results in decreased methylation of TRIM40 geneCTDPMID:31601247
Trim40RatCGP 52608 multiple interactionsISOTRIM40 (Homo sapiens)6480464CGP 52608 promotes the reaction [RORA protein binds to TRIM40 gene]CTDPMID:28238834
Trim40Ratfulvestrant multiple interactionsISOTRIM40 (Homo sapiens)6480464[bisphenol A co-treated with Fulvestrant] results in decreased methylation of TRIM40 geneCTDPMID:31601247
Trim40Ratlinsidomine increases oxidationEXP 6480464linsidomine results in increased oxidation of TRIM40 proteinCTDPMID:28086193
Trim40Ratsilicon dioxide increases expressionISOTRIM40 (Homo sapiens)6480464Silicon Dioxide analog results in increased expression of TRIM40 mRNACTDPMID:25895662
Trim40Ratsodium arsenite decreases expressionISOTrim40 (Mus musculus)6480464sodium arsenite results in decreased expression of TRIM40 mRNACTDPMID:37682722
Trim40Ratsodium hydroxide affects response to substanceISOTRIM40 (Homo sapiens)6480464TRIM40 SNP affects the susceptibility to Sodium HydroxideCTDPMID:27258892
Trim40Rattitanium dioxide increases expressionISOTrim40 (Mus musculus)6480464titanium dioxide results in increased expression of TRIM40 mRNACTDPMID:35295148

1 to 16 of 16 rows

Biological Process
1 to 10 of 10 rows

  
1 to 10 of 10 rows

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Trim40Ratcytoplasm is_active_inIBAMGI:106657 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Trim40RatIkappaB kinase complex part_ofISOTRIM40 (Homo sapiens)1624291 PMID:21474709RGDPMID:21474709
Trim40RatIkappaB kinase complex part_ofIEAUniProtKB:Q6P9F5 and ensembl:ENSP000003798261600115GO_REF:0000107EnsemblGO_REF:0000107

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Trim40Ratmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
Trim40Ratmetal ion binding enablesIEAInterPro:IPR0189571600115GO_REF:0000002InterProGO_REF:0000002
Trim40Ratprotein binding enablesISOTRIM40 (Homo sapiens)1624291UniProtKB:O14920 more ...RGDPMID:21474709
Trim40Rattransferase activity enablesIEAUniProtKB-KW:KW-08081600115GO_REF:0000043UniProtGO_REF:0000043
Trim40Ratubiquitin protein ligase activity enablesIBAMGI:2137355 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Trim40Ratzinc ion binding enablesIEAUniProtKB-KW:KW-08631600115GO_REF:0000043UniProtGO_REF:0000043
Trim40Ratzinc ion binding enablesIEAInterPro:IPR0003151600115GO_REF:0000002InterProGO_REF:0000002


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. TRIM40 promotes neddylation of IKKgamma and is downregulated in gastrointestinal cancers. Noguchi K, etal., Carcinogenesis. 2011 Jul;32(7):995-1004. doi: 10.1093/carcin/bgr068. Epub 2011 Apr 7.
3. GOA pipeline RGD automated data pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:15060004  



Trim40
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8201,680,554 - 1,691,123 (+)NCBIGRCr8
mRatBN7.2201,676,114 - 1,685,906 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl201,676,270 - 1,685,214 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx201,729,830 - 1,738,396 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0201,733,332 - 1,741,894 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0201,673,911 - 1,682,490 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0202,169,674 - 2,178,477 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl202,169,545 - 2,178,601 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0204,205,817 - 4,216,051 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4201,768,482 - 1,777,393 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1201,768,481 - 1,777,393 (+)NCBI
Celera202,385,041 - 2,394,038 (+)NCBICelera
Cytogenetic Map20p12NCBI
TRIM40
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38630,136,140 - 30,148,735 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl630,136,124 - 30,148,735 (+)EnsemblGRCh38hg38GRCh38
GRCh37630,103,917 - 30,116,512 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36630,212,489 - 30,224,488 (+)NCBINCBI36Build 36hg18NCBI36
Build 34630,212,488 - 30,223,570NCBI
Celera631,702,776 - 31,714,781 (+)NCBICelera
Cytogenetic Map6p22.1NCBI
HuRef629,902,691 - 29,914,687 (+)NCBIHuRef
CHM1_1630,106,586 - 30,118,587 (+)NCBICHM1_1
T2T-CHM13v2.0630,000,415 - 30,013,010 (+)NCBIT2T-CHM13v2.0
Trim40
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391737,192,488 - 37,201,049 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1737,192,490 - 37,201,015 (-)EnsemblGRCm39 Ensembl
GRCm381736,881,596 - 36,890,157 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1736,881,598 - 36,890,123 (-)EnsemblGRCm38mm10GRCm38
MGSCv371737,018,543 - 37,027,070 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361736,489,651 - 36,498,098 (-)NCBIMGSCv36mm8
Celera1740,300,820 - 40,309,325 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1719.16NCBI
Trim40
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955583242,054 - 259,008 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955583242,054 - 260,565 (+)NCBIChiLan1.0ChiLan1.0
TRIM40
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2544,720,791 - 44,744,925 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1640,683,795 - 40,704,421 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0629,912,857 - 29,926,550 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1630,583,968 - 30,596,583 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl630,584,272 - 30,599,635 (+)Ensemblpanpan1.1panPan2
Trim40
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494632,681,400 - 32,696,823 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936723896,054 - 909,263 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936723897,213 - 909,263 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TRIM40
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl722,702,925 - 22,717,511 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1722,702,891 - 22,717,850 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2724,860,690 - 24,873,040 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TRIM40
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11742,358,748 - 42,370,400 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604429,786,939 - 29,798,392 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Trim40
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475425,278,747 - 25,285,378 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Trim40
123 total Variants

Predicted Target Of
Summary Value
Count of predictions:108
Count of miRNA genes:91
Interacting mature miRNAs:94
Transcripts:ENSRNOT00000029070
Prediction methods:Microtar, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 17 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2306850Pia40Pristane induced arthritis QTL 400.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)2015279595304575Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20153065546530655Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20126123605Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600972Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20152784246527842Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124159021Rat
1600382Edcs3Endometrial carcinoma susceptibility QTL33.50.003uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)20125159026Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129191651Rat
724519Bp144Blood pressure QTL 1440.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2013624629Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129191651Rat

1 to 10 of 17 rows
D20Yum3  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2201,679,261 - 1,679,465 (+)MAPPERmRatBN7.2
Rnor_6.0202,172,537 - 2,172,740NCBIRnor6.0
Rnor_5.0204,209,526 - 4,209,729UniSTSRnor5.0
RGSC_v3.4201,771,345 - 1,771,548UniSTSRGSC3.4
Celera202,387,904 - 2,388,107UniSTS
Cytogenetic Map20p12UniSTS




alimentary part of gastrointestinal system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
9 3 17 16 11 7 11 28 8 2 14 5



Ensembl Acc Id: ENSRNOT00000029070   ⟹   ENSRNOP00000035419
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl201,676,270 - 1,685,214 (+)Ensembl
Rnor_6.0 Ensembl202,169,545 - 2,178,601 (+)Ensembl
RefSeq Acc Id: NM_001009175   ⟹   NP_001009175
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8201,681,333 - 1,691,123 (+)NCBI
mRatBN7.2201,676,114 - 1,685,906 (+)NCBI
Rnor_6.0202,169,674 - 2,178,469 (+)NCBI
Rnor_5.0204,205,817 - 4,216,051 (+)NCBI
RGSC_v3.4201,768,482 - 1,777,393 (+)RGD
Celera202,385,041 - 2,394,038 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063279326   ⟹   XP_063135396
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8201,680,554 - 1,691,123 (+)NCBI
RefSeq Acc Id: XM_063279327   ⟹   XP_063135397
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8201,680,554 - 1,691,123 (+)NCBI
Protein RefSeqs NP_001009175 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135396 (Get FASTA)   NCBI Sequence Viewer  
  XP_063135397 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein CAE84059 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000035419.5
  ENSRNOP00000098139
GenBank Protein Q6MFY8 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001009175   ⟸   NM_001009175
- UniProtKB: Q6MFY8 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000035419   ⟸   ENSRNOT00000029070
RefSeq Acc Id: XP_063135396   ⟸   XM_063279326
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063135397   ⟸   XM_063279327
- Peptide Label: isoform X2
- UniProtKB: Q6MFY8 (UniProtKB/Swiss-Prot)

Name Modeler Protein Id AA Range Protein Structure
AF-Q6MFY8-F1-model_v2 AlphaFold Q6MFY8 1-247 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 25 of 25 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-4973 BioCyc
Ensembl Genes ENSRNOG00000000783 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000029070.7 UniProtKB/Swiss-Prot
  ENSRNOT00000120475 ENTREZGENE
Gene3D-CATH 3.30.40.10 UniProtKB/Swiss-Prot
  Classic Zinc Finger UniProtKB/Swiss-Prot
InterPro TRIM/RBCC UniProtKB/Swiss-Prot
  Znf_B-box UniProtKB/Swiss-Prot
  Znf_C3HC4_RING-type UniProtKB/Swiss-Prot
  Znf_RING UniProtKB/Swiss-Prot
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot
  Znf_RING_CS UniProtKB/Swiss-Prot
KEGG Report rno:365528 UniProtKB/Swiss-Prot
NCBI Gene 365528 ENTREZGENE
PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIM UniProtKB/Swiss-Prot
Pfam zf-C3HC4 UniProtKB/Swiss-Prot
PhenoGen Trim40 PhenoGen
PROSITE ZF_BBOX UniProtKB/Swiss-Prot
  ZF_RING_1 UniProtKB/Swiss-Prot
  ZF_RING_2 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000000783 RatGTEx
SMART RING UniProtKB/Swiss-Prot
Superfamily-SCOP B-box zinc-binding domain UniProtKB/Swiss-Prot
  RING/U-box UniProtKB/Swiss-Prot
UniProt Q6MFY8 ENTREZGENE, UniProtKB/Swiss-Prot
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-05-24 Trim40  tripartite motif-containing 40  LOC100364386  tripartite motif-containing protein 40-like  Data merged from RGD:2321173 1643240 APPROVED
2010-05-05 LOC100364386  tripartite motif-containing protein 40-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-03-07 Trim40  tripartite motif-containing 40  Trim40  tripartite motif protein 40  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Trim40  tripartite motif protein 40    tripartite motif-containing 40  Name updated 1299863 APPROVED
2005-12-06 Trim40  tripartite motif-containing 40      Symbol and Name updated 1559027 APPROVED
2005-11-17 Trim40  tripartite motif-containing 40      Symbol and Name status set to approved 1299863 APPROVED
2005-07-29 Trim40  tripartite motif-containing 40      Symbol and Name status set to provisional 70820 PROVISIONAL