Gm30794 (predicted gene, 30794) - Rat Genome Database

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Gene: Gm30794 (predicted gene, 30794) Mus musculus
Analyze
Symbol: Gm30794
Name: predicted gene, 30794
RGD ID: 9677543
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391787,762,405 - 87,767,787 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1787,762,280 - 87,767,792 (-)EnsemblGRCm39 Ensembl
GRCm381787,454,977 - 87,460,359 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1787,454,969 - 87,460,364 (-)EnsemblGRCm38mm10GRCm38
Celera1791,853,197 - 91,857,351 (-)NCBICelera
Cytogenetic Map17E4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:18799693  


Genomics

Variants

.
Variants in Gm30794
239 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175710765191107803Mouse
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175710765191107803Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175710765191107803Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175710765191107803Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175710765191107803Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175710765191107803Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175753444793507179Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5758908991589197Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176230101095294699Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176230101095294699Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176388554895294699Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176521493895294699Mouse
14928308Manh82_mmandible shape 82 (mouse)176631524395294699Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176894131995294699Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177070119895294699Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177070119895294699Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177070119895294699Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177070119895294699Mouse
1357528Nhdlq3_mnon-HDL QTL 3 (mouse)Not determined177339513295294699Mouse
4141195Nilac11_mnicotine induced locomotor activity 11 (mouse)Not determined177339513295294699Mouse
4141697Hbnr3_mHeligmosomoides bakeri nematode resistance 3 (mouse)Not determined7410765193507179Mouse
1357646Axtq3_manxiety QTL 3 (mouse)Not determined177458908990395270Mouse
1357552Aaj4_manxiety in A/J 4 (mouse)Not determined177458908990395270Mouse
14697708Stsl5_mSalmonella typhimurium susceptibility locus 5 (mouse)178080742991407428Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000234358
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1787,762,302 - 87,766,924 (-)Ensembl
GRCm38.p6 Ensembl1787,455,112 - 87,459,427 (-)Ensembl
RefSeq Acc Id: ENSMUST00000234806
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1787,762,397 - 87,767,792 (-)Ensembl
GRCm38.p6 Ensembl1787,454,969 - 87,460,364 (-)Ensembl
RefSeq Acc Id: ENSMUST00000241669
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1787,762,399 - 87,766,906 (-)Ensembl
RefSeq Acc Id: ENSMUST00000242619
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1787,762,280 - 87,766,918 (-)Ensembl
RefSeq Acc Id: ENSMUST00000246687
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1787,762,405 - 87,766,889 (-)Ensembl
RefSeq Acc Id: NR_168623
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391787,762,405 - 87,767,787 (-)NCBI
GRCm381787,454,977 - 87,460,359 (-)NCBI
Sequence:
RefSeq Acc Id: NR_168624
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391787,762,405 - 87,766,906 (-)NCBI
GRCm381787,454,977 - 87,459,478 (-)NCBI
Sequence:
Promoters
RGD ID:15094903
Promoter ID:EPDNEWNC_M2818
Type:single initiation site
Name:Gm30794_1
Description:predicted gene, 30794 [Source:MGI Symbol;Acc:MGI:5589953]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381787,459,468 - 87,459,528EPDNEWNC

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000117545 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000234358 ENTREZGENE
  ENSMUST00000234806 ENTREZGENE
MGD MGI:5589953 ENTREZGENE
NCBI Gene Gm30794 ENTREZGENE
PhenoGen Gm30794 PhenoGen
RNAcentral URS0001BBE3BE RNACentral
  URS0001BBE63F RNACentral