Gene: Gm33332 (predicted gene, 33332) Mus musculus |
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Analyze |
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Symbol: |
Gm33332 |
Name: |
predicted gene, 33332 |
RGD ID: |
9667653 |
MGI Page |
MGI |
Description: |
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Type: |
ncrna (Ensembl: lncRNA)
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RefSeq Status: |
MODEL |
Latest Assembly: |
GRCm39 - Mouse Genome Assembly GRCm39 |
Position: |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 10 | 19,537,697 - 19,594,566 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 19,591,900 - 19,594,452 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 19,661,949 - 19,718,807 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 19,716,152 - 19,718,704 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | Celera | 10 | 19,560,310 - 19,616,914 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | A3 | NCBI | | | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
QTLs in Region (GRCm39)
11532725 | Sluc44b_m | susceptibility to lung cancer 44b (mouse) | | | | | 10 | 1 | 26289265 | Mouse | 11532724 | Sluc44c_m | susceptibility to lung cancer 44c (mouse) | | | | | 10 | 1 | 26289265 | Mouse | 11532723 | Sluc44d_m | susceptibility to lung cancer 44d (mouse) | | | | | 10 | 1 | 26289265 | Mouse | 11532722 | Sluc44e_m | susceptibility to lung cancer 44e (mouse) | | | | | 10 | 1 | 26289265 | Mouse | 11532721 | Sluc44_m | susceptibility to lung cancer 44 (mouse) | | | | | 10 | 1 | 26289265 | Mouse | 11532720 | Sluc44a_m | susceptibility to lung cancer 44a (mouse) | | | | | 10 | 1 | 26289265 | Mouse | 11532718 | Sluc44f_m | susceptibility to lung cancer 44f (mouse) | | | | | 10 | 1 | 26289265 | Mouse | 11532717 | Sluc44g_m | susceptibility to lung cancer 44g (mouse) | | | | | 10 | 1 | 26289265 | Mouse | 11533917 | Mts2_m | mammary tumor susceptibility 2 (mouse) | | | | | 10 | 1 | 26289265 | Mouse | 1300759 | Geot_m | geotaxia (mouse) | | | Not determined | | 10 | 1 | 26289265 | Mouse | 1300881 | Sluc29_m | susceptibility to lung cancer 29 (mouse) | | | Not determined | | 10 | 1 | 26289265 | Mouse | 12879494 | Facq1_m | fear acquisition QTL 1 (mouse) | | | | | 10 | 1 | 31279130 | Mouse | 15039341 | Nmrs28_m | NAFLD-associated magnetic resonance shift 28 (mouse) | | | | | 10 | 351001 | 34351001 | Mouse | 1357813 | Ath20_m | atherosclerosis 20 (mouse) | | | Not determined | | 10 | 3283185 | 37283334 | Mouse | 1300790 | Pgia6_m | proteoglycan induced arthritis 6 (mouse) | | | Not determined | | 10 | 3810171 | 37810295 | Mouse | 1300997 | Eae15_m | susceptibility to experimental allergic encephalomyelitis 15 (mouse) | | | Not determined | | 10 | 4408154 | 38408276 | Mouse | 13208561 | Wght8_m | weight 8 (mouse) | | | | | 10 | 4950000 | 43875996 | Mouse | 1302092 | Ath11_m | atherosclerosis 11 (mouse) | | | Not determined | | 10 | 6151945 | 58693521 | Mouse | 1357740 | Obsty3_m | obesity 3 (mouse) | | | Not determined | | 10 | 8235478 | 116190980 | Mouse | 1558865 | Lith21_m | lithogenic gene 21 (mouse) | | | Not determined | | 10 | 8525003 | 42525126 | Mouse | 1301796 | Mop2_m | morphine preference 2 (mouse) | | | Not determined | | 10 | 9289119 | 29028424 | Mouse | 1301448 | Pas11_m | pulmonary adenoma susceptibility 11 (mouse) | | | Not determined | | 10 | 9890264 | 43890391 | Mouse | 1301129 | Alcp15_m | alcohol preference locus 15 (mouse) | | | Not determined | | 10 | 9890264 | 43890391 | Mouse | 1302133 | Alcp16_m | alcohol preference locus 16 (mouse) | | | Not determined | | 10 | 9890264 | 43890391 | Mouse | 1301386 | Sysbp1_m | systolic blood pressure 1 (mouse) | | | Not determined | | 10 | 10108265 | 87401095 | Mouse | 1357825 | Kidpq2_m | kidney weight percentage QTL 2 (mouse) | | | Not determined | | 10 | 12704051 | 84079784 | Mouse | 1357656 | Hrtq3_m | heart weight QTL 3 (mouse) | | | Not determined | | 10 | 12704051 | 84079784 | Mouse | 1357864 | Scfpq1_m | subcutaneous fat pad percentage QTL 1 (mouse) | | | Not determined | | 10 | 12704051 | 84079784 | Mouse | 39128215 | Lwq17_m | liver weight QTL 17 (mouse) | | | | | 10 | 12704051 | 84079784 | Mouse | 4141956 | Egq7_m | early growth QTL 7 (mouse) | | | Not determined | | | 12704051 | 84079784 | Mouse | 4141943 | W6q6_m | weight 6 weeks QTL 6 (mouse) | | | Not determined | | | 12704051 | 84079784 | Mouse | 4142272 | W10q5_m | weight 10 weeks QTL 5 (mouse) | | | Not determined | | | 12704051 | 84079784 | Mouse | 4142380 | W3q11_m | weight 3 weeks QTL 11 (mouse) | | | Not determined | | | 12704051 | 84079784 | Mouse | 13208570 | Bmiq9_m | body mass index QTL 9 (mouse) | | | | | 10 | 12875744 | 24875898 | Mouse | 1558857 | Igan1_m | IgA nephropathy 1 (mouse) | | | Not determined | | 10 | 17718313 | 29704155 | Mouse | 1302067 | Scc9_m | colon tumor susceptibility 9 (mouse) | | | Not determined | | 10 | 18259333 | 125575232 | Mouse | 27226772 | Tibl13_m | tibia length 13, 10 week (mouse) | | | | | 10 | 18875748 | 129635869 | Mouse | 10755518 | Chol16_m | cholesterol 16 (mouse) | | | | | 10 | 18915043 | 52915043 | Mouse | |
Expression
Sequence
RefSeq Acc Id: |
ENSMUST00000213761 |
Type: |
CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 Ensembl | 10 | 19,591,900 - 19,594,452 (-) | Ensembl | GRCm38.p6 Ensembl | 10 | 19,716,152 - 19,718,704 (-) | Ensembl |
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RefSeq Acc Id: |
XR_004936465 |
Type: |
NON-CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 | 10 | 19,537,697 - 19,594,566 (-) | NCBI |
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Sequence: |
TGTATTGATGCGACAGAGAACTGCAGAGCACAGTGACTTGTTCTGCCAATGACCTGGAGGTGGG TCTGTACCCACAGGACTCCTAACTCCTACCCACCGGGTAACCACCACTTTCAGAAAGAACATCC TCTCTGCCATGCTGCCGTTTCTTTGTTCAGATGTGTTTTACGTGTTTATCTTCCGTTGCATCTT TCCTTCTGATCTACGTAGGAAGAACGTGACATGGTGCATTGTCCTAGTTCCCTTTGTACCATGG TGACAGGGACACCCAGCAGAAGAATTTAGGAGAGGAAGTCAACCATGATGTGGCTGAGTCGGTT TCACCAATCTCGATGCATAATGTTCTGCTCAAGCATCTGGGGCCAAGAAATGATGAACTTCTGA AACCATGACCGAAATTAGCCTTTCCTCTTCTGTCTCTGTCAGCCATCATTATGTACAGTAATGC TGTCACAAGAAGAGTAAACAAGAAACCTTCTTAGCTCAGAACTGCTTACCACAGCCCTCTCACA GGCTTGTCTTCACTCACTGGCCTTTGCTTCTTTTCCCATGTTGTCTCTGTTGCGCACCGGGAAA GGGTGTTTAGATAGTAATAGAATCCCATTTGTATTGCCTCTCTTTTAACTCCTAGTGATGGGTA GAGGCTTGGAATATTTTTAAAGAGACCTCTAAGATTCAAAGGAATAAAAATCCTCATTGTAGAA TTGCATCTTCTAGGCCAAACAGGTAATATAATGAAAAGAGGAATACTCTCTTACCTTTCAGTAA CGCCATTTTGGAAGAAGCCCATTGTCCTAGACATTAAGAGGCATCAGTATTTATTCTGCCATCA GTATAAACTCATGATGTTGACTGTCCTACCTAGCCTCTCTGAATCTGTGTTTCTAGAACTTCAC AGTGGGTTTAAGATCTCCAACTCATATAAAAAATACCTCTTAAGATAAGACATTGGACAAATAT TAGTGACTACAATTTGATATTTATGAACATGTGGAATATTAGGTTTATAATAAGATGACTTAGT TACCATTCTCAGTAGGTATTTTTGAGAGAGAAGAAAGTGAAGACTGTAGAGACTACTGGGATAA TAGCAATTATCCAGGGAAAAACCTGTATCTTTGG
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RefSeq Acc Id: |
XR_004936466 |
Type: |
NON-CODING |
Position: |
Mouse Assembly | Chr | Position (strand) | Source |
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GRCm39 | 10 | 19,537,697 - 19,594,555 (-) | NCBI |
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Sequence: |
GACAGAGAACTGCAGAGCACAGTGACTTGTTCTGCCAATGACCTGGAGGTGGGTCTGTACCCAC AGGACTCCTAACTCCTACCCACCGGGTAACCACCACTTTCAGAAAGAACATCCTCTCTGCCATG CTGCCGTTTCTTTGTTCAGATGTGTTTTGAAGAACGTGACATGGTGCATTGTCCTAGTTCCCTT TGTACCATGGTGACAGGGACACCCAGCAGAAGAATTTAGGAGAGGAAGTCAACCATGATGTGGC TGAGTCGGTTTCACCAATCTCGATGCATAATGTTCTGCTCAAGCATCTGGGGCCAAGAAATGAT GAACTTCTGAAACCATGACCGAAATTAGCCTTTCCTCTTCTGTCTCTGTCAGCCATCATTATGT ACAGTAATGCTGTCACAAGAAGAGTAAACAAGAAACCTTCTTAGCTCAGAACTGCTTACCACAG CCCTCTCACAGGCTTGTCTTCACTCACTGGCCTTTGCTTCTTTTCCCATGTTGTCTCTGTTGCG CACCGGGAAAGGGTGTTTAGATAGTAATAGAATCCCATTTGTATTGCCTCTCTTTTAACTCCTA GTGATGGGTAGAGGCTTGGAATATTTTTAAAGAGACCTCTAAGATTCAAAGGAATAAAAATCCT CATTGTAGAATTGCATCTTCTAGGCCAAACAGGTAATATAATGAAAAGAGGAATACTCTCTTAC CTTTCAGTAACGCCATTTTGGAAGAAGCCCATTGTCCTAGACATTAAGAGGCATCAGTATTTAT TCTGCCATCAGTATAAACTCATGATGTTGACTGTCCTACCTAGCCTCTCTGAATCTGTGTTTCT AGAACTTCACAGTGGGTTTAAGATCTCCAACTCATATAAAAAATACCTCTTAAGATAAGACATT GGACAAATATTAGTGACTACAATTTGATATTTATGAACATGTGGAATATTAGGTTTATAATAAG ATGACTTAGTTACCATTCTCAGTAGGTATTTTTGAGAGAGAAGAAAGTGAAGACTGTAGAGACT ACTGGGATAATAGCAATTATCCAGGGAAAAACCTGTATCTTTGG
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Promoters
RGD ID: | 15093725 |
Promoter ID: | EPDNEWNC_M1629 |
Type: | multiple initiation site |
Name: | Gm33332_1 |
Description: | predicted gene, 33332 [Source:MGI Symbol;Acc:MGI:5592491] |
SO ACC ID: | SO:0000170 |
Source: | EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/) |
Experiment Methods: | Single-end sequencing. |
Position: | Mouse Assembly | Chr | Position (strand) | Source |
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GRCm38 | 10 | 19,718,703 - 19,718,763 | EPDNEWNC |
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Additional Information
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