Gm34396 (predicted gene, 34396) - Rat Genome Database

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Gene: Gm34396 (predicted gene, 34396) Mus musculus
Analyze
Symbol: Gm34396
Name: predicted gene, 34396
RGD ID: 9615189
MGI Page MGI
Description:
Type: protein-coding (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Previously known as: Gm2692; keratin-associated protein 20-2-like; predicted gene 2692
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391688,980,203 - 88,980,388 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1688,980,203 - 88,980,385 (+)EnsemblGRCm39 Ensembl
GRCm381689,183,315 - 89,183,500 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1689,183,315 - 89,183,497 (+)EnsemblGRCm38mm10GRCm38
MGSCv371689,183,560 - 89,183,745 (+)MERGEGRCm37MGSCv37mm9NCBIm37
Celera1689,386,273 - 89,386,458 (+)NCBICelera
Cytogenetic Map16C3.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Gm34396
3 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884376Skwq4_mskull length QTL 4, 5 week (mouse)16841786490896888Mouse
1302096Aod1a_mautoimmune ovarian dysgenesis 1a (mouse)Not determined163544664392573008Mouse
1301364Lith14_mlithogenic gene 14 (mouse)Not determined165566184689661961Mouse
1301125Sluc27_msusceptibility to lung cancer 27 (mouse)Not determined166160864495608764Mouse
4141113Tgq28_mtriglyceride QTL 28 (mouse)Not determined6298664696986646Mouse
1300928Etia_methanol induced activation (mouse)Not determined166331390797314016Mouse
1558740Bpq9_mblood pressure QTL 9 (mouse)Not determined166332733697327472Mouse
1302194Pgia10_mproteoglycan induced arthritis 10 (mouse)Not determined166860072298008968Mouse
1301032Tauph_mtau phosphorylation (mouse)Not determined166907613298008968Mouse
11049573Lmr18b_mleishmaniasis resistance 18b (mouse)166912761198008968Mouse
11049574Lmr18a_mleishmaniasis resistance 18a (mouse)166912761198008968Mouse
4142262Lmr18_mleishmaniasis resistance 18 (mouse)Not determined166912761198008968Mouse
11522753Cocia19_mcocaine-induced activity, QTL 19 (mouse)166925448298008968Mouse
1301598Renf2_mrenal failure 2 (mouse)Not determined167038025298008968Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_006523125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC117230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000232130
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1688,980,203 - 88,980,385 (+)Ensembl
GRCm38.p6 Ensembl1689,183,315 - 89,183,497 (+)Ensembl
RefSeq Acc Id: XM_006523125   ⟹   XP_006523188
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391688,980,203 - 88,980,388 (+)NCBI
GRCm381689,183,315 - 89,183,500 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_006523188 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_006523188   ⟸   XM_006523125
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000116552 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000232130 ENTREZGENE
MGD MGI:5593555 ENTREZGENE
NCBI Gene Gm34396 ENTREZGENE
PhenoGen Gm34396 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-05 Gm34396  predicted gene, 34396  Gm2692  predicted gene 2692  Data merged from RGD:2299610 737654 PROVISIONAL