Gm31641 (predicted gene, 31641) - Rat Genome Database

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Gene: Gm31641 (predicted gene, 31641) Mus musculus
Analyze
Symbol: Gm31641
Name: predicted gene, 31641
RGD ID: 9596711
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391694,985,396 - 95,060,561 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1694,984,498 - 95,156,535 (-)EnsemblGRCm39 Ensembl
GRCm381695,184,537 - 95,259,702 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1695,183,639 - 95,355,676 (-)EnsemblGRCm38mm10GRCm38
Celera1696,270,123 - 96,323,580 (-)NCBICelera
Cytogenetic Map16C4NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in Gm31641
104 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301125Sluc27_msusceptibility to lung cancer 27 (mouse)Not determined166160864495608764Mouse
4141113Tgq28_mtriglyceride QTL 28 (mouse)Not determined6298664696986646Mouse
1300928Etia_methanol induced activation (mouse)Not determined166331390797314016Mouse
1558740Bpq9_mblood pressure QTL 9 (mouse)Not determined166332733697327472Mouse
1302194Pgia10_mproteoglycan induced arthritis 10 (mouse)Not determined166860072298008968Mouse
1301032Tauph_mtau phosphorylation (mouse)Not determined166907613298008968Mouse
11049573Lmr18b_mleishmaniasis resistance 18b (mouse)166912761198008968Mouse
11049574Lmr18a_mleishmaniasis resistance 18a (mouse)166912761198008968Mouse
4142262Lmr18_mleishmaniasis resistance 18 (mouse)Not determined166912761198008968Mouse
11522753Cocia19_mcocaine-induced activity, QTL 19 (mouse)166925448298008968Mouse
1301598Renf2_mrenal failure 2 (mouse)Not determined167038025298008968Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000232091
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1694,984,498 - 95,060,561 (-)Ensembl
GRCm38.p6 Ensembl1695,183,639 - 95,259,702 (-)Ensembl
RefSeq Acc Id: ENSMUST00000232605
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1695,038,630 - 95,156,535 (-)Ensembl
GRCm38.p6 Ensembl1695,237,771 - 95,355,676 (-)Ensembl
RefSeq Acc Id: NR_153766
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391694,985,396 - 95,060,561 (-)NCBI
GRCm381695,184,537 - 95,259,702 (-)NCBI
Sequence:
Promoters
RGD ID:15094750
Promoter ID:EPDNEWNC_M2652
Type:single initiation site
Name:Gm31641_1
Description:predicted gene, 31641 [Source:MGI Symbol;Acc:MGI:5590800]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381695,259,702 - 95,259,762EPDNEWNC

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000116720 Ensembl
MGD MGI:5590800 ENTREZGENE
NCBI Gene Gm31641 ENTREZGENE
PhenoGen Gm31641 PhenoGen
RNAcentral URS0000CCE043 RNACentral