Fem1b-ps1 (feminization of XX and XO animals 1B, pseudogene 1) - Rat Genome Database

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Gene: Fem1b-ps1 (feminization of XX and XO animals 1B, pseudogene 1) Rattus norvegicus
Analyze
Symbol: Fem1b-ps1
Name: feminization of XX and XO animals 1B, pseudogene 1
RGD ID: 9287253
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: LOC103690937; protein fem-1 homolog B-like
Related Functional Gene: Fem1b  
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr813,833,500 - 3,839,316 (+)NCBIGRCr8
mRatBN7.212,013,117 - 2,018,583 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.011,637,755 - 1,643,348 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Celera1563,144 - 568,737 (+)NCBICelera
Cytogenetic Map1p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Fem1b-ps1
40 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354647Despr8Despair related QTL 80.0000341locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1124744506Rat
2298546Neuinf4Neuroinflammation QTL 45.1nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)1128736750Rat
2313053Bss51Bone structure and strength QTL 513.80.0001tibia length (VT:0004357)tibia length (CMO:0000450)1132356093Rat
2313070Bss52Bone structure and strength QTL 524.40.0001body length (VT:0001256)body length (CMO:0000013)1132356093Rat
2313090Bmd69Bone mineral density QTL 694.40.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)1132356093Rat
738020Pia8Pristane induced arthritis QTL 84.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1165833076Rat
1578650Bmd6Bone mineral density QTL 612.2femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)150910843284926Rat
1578651Bmd7Bone mineral density QTL 714.2femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)150910843284926Rat
1578669Bss9Bone structure and strength QTL 96.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)150910843284926Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_017590412   ⟹   XP_017445901
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.011,637,755 - 1,643,348 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017604562   ⟹   XP_017460051
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1563,144 - 568,737 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-62458 BioCyc
NCBI Gene LOC103690937 ENTREZGENE
PhenoGen Fem1b-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Fem1b-ps1  feminization of XX and XO animals 1B, pseudogene 1  LOC103690937  protein fem-1 homolog B-like  Symbol and Name Changed 1299863 APPROVED
2014-08-25 LOC103690937  protein fem-1 homolog B-like      Symbol and Name status set to provisional 70820 PROVISIONAL