LOC102004103 (EF-hand calcium-binding domain-containing protein 1-like) - Rat Genome Database

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Gene: LOC102004103 (EF-hand calcium-binding domain-containing protein 1-like) Chinchilla lanigera
Analyze
Symbol: LOC102004103
Name: EF-hand calcium-binding domain-containing protein 1-like
RGD ID: 9044240
Description:
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554329,467,793 - 9,483,554 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005388019   ⟹   XP_005388076
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554329,467,793 - 9,483,554 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013515941   ⟹   XP_013371395
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554329,467,793 - 9,483,554 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005388076 (Get FASTA)   NCBI Sequence Viewer  
  XP_013371395 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000005595
  ENSCLAP00000005595.1
  ENSCLAP00000005596.1
Reference Protein Sequences
RefSeq Acc Id: XP_005388076   ⟸   XM_005388019
- Peptide Label: isoform X2
- UniProtKB: A0A8C2UX88 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013371395   ⟸   XM_013515941
- Peptide Label: isoform X1
- UniProtKB: A0A8C2UX88 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
EF-hand


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000003974 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000005696 ENTREZGENE
  ENSCLAT00000005696.1 UniProtKB/TrEMBL
  ENSCLAT00000005697.1 UniProtKB/TrEMBL
Gene3D-CATH EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
  Recoverin UniProtKB/TrEMBL
NCBI Gene LOC102004103 ENTREZGENE
PANTHER PTHR23055 UniProtKB/TrEMBL
  RIKEN CDNA 1700109H08 GENE UniProtKB/TrEMBL
Pfam EF-hand_5 UniProtKB/TrEMBL
  EF-hand_7 UniProtKB/TrEMBL
PRINTS RECOVERIN UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
SMART EFh UniProtKB/TrEMBL
Superfamily-SCOP SSF47473 UniProtKB/TrEMBL
UniProt A0A8C2UX88 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2UZI9_CHILA UniProtKB/TrEMBL