Tmem132a (transmembrane protein 132A) - Rat Genome Database

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Gene: Tmem132a (transmembrane protein 132A) Chinchilla lanigera
Analyze
Symbol: Tmem132a
Name: transmembrane protein 132A
RGD ID: 9020892
Description: ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of programmed cell death (ortholog); negative regulation of protein catabolic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); leukocyte adhesion deficiency 3 (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555115,567,415 - 5,574,522 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555115,567,413 - 5,574,759 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data
Tmem132a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555115,567,415 - 5,574,522 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555115,567,413 - 5,574,759 (+)NCBIChiLan1.0ChiLan1.0
TMEM132A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381160,924,460 - 60,937,159 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1160,924,460 - 60,937,159 (+)EnsemblGRCh38hg38GRCh38
GRCh371160,691,932 - 60,704,631 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361160,448,489 - 60,461,207 (+)NCBINCBI36Build 36hg18NCBI36
Celera1158,052,800 - 58,065,518 (+)NCBICelera
Cytogenetic Map11q12.2NCBI
HuRef1157,038,081 - 57,050,800 (+)NCBIHuRef
CHM1_11160,558,217 - 60,570,931 (+)NCBICHM1_1
T2T-CHM13v2.01160,875,611 - 60,888,306 (+)NCBIT2T-CHM13v2.0
Tmem132a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391910,835,193 - 10,847,569 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1910,835,186 - 10,847,304 (-)EnsemblGRCm39 Ensembl
GRCm381910,857,829 - 10,870,205 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1910,857,822 - 10,869,940 (-)EnsemblGRCm38mm10GRCm38
MGSCv371910,932,319 - 10,944,269 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361910,924,874 - 10,936,824 (-)NCBIMGSCv36mm8
Celera1911,550,897 - 11,562,848 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map197.26NCBI
Tmem132a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81216,931,962 - 216,943,644 (-)NCBIGRCr8
mRatBN7.21207,507,074 - 207,518,756 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1207,507,077 - 207,518,758 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1215,882,163 - 215,893,452 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01222,942,755 - 222,954,168 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01215,636,551 - 215,647,840 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01226,912,562 - 226,925,023 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1226,912,612 - 226,924,244 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01233,978,111 - 233,989,805 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41213,356,270 - 213,367,559 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11213,514,699 - 213,525,989 (-)NCBI
Celera1204,999,909 - 205,011,198 (-)NCBICelera
Cytogenetic Map1q43NCBI
TMEM132A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2962,093,725 - 62,106,412 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11163,137,762 - 63,150,456 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01156,187,444 - 56,200,353 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11159,628,353 - 59,640,910 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1159,628,534 - 59,640,658 (+)Ensemblpanpan1.1panPan2
TMEM132A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11855,363,713 - 55,376,227 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1855,363,698 - 55,385,587 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1853,936,900 - 53,949,410 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01856,412,326 - 56,424,636 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1856,412,326 - 56,424,601 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11855,469,692 - 55,482,178 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01855,091,271 - 55,103,648 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01855,972,452 - 55,984,779 (-)NCBIUU_Cfam_GSD_1.0
Tmem132a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494711,883,016 - 11,892,106 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365811,995,941 - 2,006,059 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365811,996,838 - 2,006,118 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM132A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl210,814,307 - 10,824,894 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1210,814,305 - 10,827,851 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2210,341,803 - 10,352,089 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM132A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1112,910,668 - 12,923,946 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl112,910,280 - 12,923,718 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038110,279,242 - 110,292,307 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem132a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624926286,227 - 292,714 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624926286,216 - 294,329 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000006032   ⟹   ENSCLAP00000005930
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555115,567,415 - 5,574,522 (+)Ensembl
RefSeq Acc Id: XM_013506452   ⟹   XP_013361906
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555115,567,413 - 5,574,759 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013506453   ⟹   XP_013361907
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555115,567,413 - 5,574,759 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013506454   ⟹   XP_013361908
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555115,567,413 - 5,574,759 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013506455   ⟹   XP_013361909
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555115,567,413 - 5,574,759 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013361906 (Get FASTA)   NCBI Sequence Viewer  
  XP_013361907 (Get FASTA)   NCBI Sequence Viewer  
  XP_013361908 (Get FASTA)   NCBI Sequence Viewer  
  XP_013361909 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000005930
  ENSCLAP00000005930.1
RefSeq Acc Id: XP_013361906   ⟸   XM_013506452
- Peptide Label: isoform X1
- UniProtKB: A0A8C2UV37 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013361907   ⟸   XM_013506453
- Peptide Label: isoform X2
- UniProtKB: A0A8C2UV37 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013361908   ⟸   XM_013506454
- Peptide Label: isoform X3
- UniProtKB: A0A8C2UV37 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013361909   ⟸   XM_013506455
- Peptide Label: isoform X4
- UniProtKB: A0A8C2UV37 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000005930   ⟸   ENSCLAT00000006032

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000004204 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000006032 ENTREZGENE
  ENSCLAT00000006032.1 UniProtKB/TrEMBL
InterPro TMEM132 UniProtKB/TrEMBL
  TMEM132_C UniProtKB/TrEMBL
  TMEM132_M UniProtKB/TrEMBL
  TMEM132_N UniProtKB/TrEMBL
NCBI Gene Tmem132a ENTREZGENE
PANTHER PTHR13388 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 132A UniProtKB/TrEMBL
Pfam TMEM132 UniProtKB/TrEMBL
  TMEM132D_C UniProtKB/TrEMBL
  TMEM132D_N UniProtKB/TrEMBL
UniProt A0A8C2UV37 ENTREZGENE, UniProtKB/TrEMBL