Nmur1 (neuromedin U receptor 1) - Rat Genome Database

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Gene: Nmur1 (neuromedin U receptor 1) Chinchilla lanigera
Analyze
Symbol: Nmur1
Name: neuromedin U receptor 1
RGD ID: 8964982
Description: ENCODES a protein that exhibits neuromedin U binding (ortholog); neuromedin U receptor activity (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); chloride transport (ortholog); neuropeptide signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); Joubert syndrome 22 (ortholog); Perlman syndrome (ortholog); FOUND IN cilium (ortholog); membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: neuromedin-U receptor 1
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554534,120,110 - 4,124,927 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554534,118,532 - 4,126,143 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cilium  (ISO)
membrane  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Nmur1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554534,120,110 - 4,124,927 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554534,118,532 - 4,126,143 (+)NCBIChiLan1.0ChiLan1.0
NMUR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382231,518,455 - 231,530,445 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2231,523,187 - 231,530,445 (-)EnsemblGRCh38hg38GRCh38
GRCh372232,387,898 - 232,395,156 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362232,096,116 - 232,103,452 (-)NCBINCBI36Build 36hg18NCBI36
Build 342232,213,375 - 232,220,707NCBI
Celera2226,164,278 - 226,171,589 (-)NCBICelera
Cytogenetic Map2q37.1NCBI
HuRef2224,229,326 - 224,236,645 (-)NCBIHuRef
CHM1_12232,393,685 - 232,400,994 (-)NCBICHM1_1
T2T-CHM13v2.02232,002,894 - 232,014,900 (-)NCBIT2T-CHM13v2.0
Nmur1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39186,313,964 - 86,317,083 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl186,314,025 - 86,353,950 (-)EnsemblGRCm39 Ensembl
GRCm38186,386,242 - 86,389,361 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl186,386,303 - 86,426,228 (-)EnsemblGRCm38mm10GRCm38
MGSCv37188,282,900 - 88,284,716 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36188,217,496 - 88,219,312 (-)NCBIMGSCv36mm8
Celera189,354,761 - 89,356,568 (-)NCBICelera
Cytogenetic Map1C5NCBI
cM Map143.94NCBI
Nmur1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8994,480,002 - 94,486,147 (-)NCBIGRCr8
mRatBN7.2987,033,231 - 87,038,070 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl987,033,279 - 87,036,684 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx995,450,336 - 95,453,852 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.09100,579,513 - 100,582,978 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0998,961,616 - 98,965,029 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0993,402,871 - 93,407,264 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl993,403,314 - 93,404,883 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0993,131,707 - 93,133,277 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4985,146,808 - 85,148,380 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1985,330,226 - 85,331,797 (-)NCBI
Celera984,448,712 - 84,452,127 (-)NCBICelera
Cytogenetic Map9q35NCBI
NMUR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213134,144,511 - 134,225,457 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B134,159,476 - 134,240,422 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B118,773,713 - 118,854,590 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B237,556,920 - 237,564,268 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B237,556,920 - 237,564,268 (-)Ensemblpanpan1.1panPan2
NMUR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12543,395,711 - 43,400,670 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2543,399,597 - 43,411,087 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2543,954,267 - 43,963,017 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02543,653,048 - 43,661,799 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2543,654,204 - 43,663,250 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12543,580,573 - 43,589,297 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02543,422,295 - 43,432,143 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02543,578,790 - 43,587,539 (-)NCBIUU_Cfam_GSD_1.0
Nmur1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303185,553,423 - 185,559,248 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365255,382,372 - 5,385,788 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365255,355,570 - 5,386,284 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NMUR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15132,217,223 - 132,228,645 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115132,217,236 - 132,228,645 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215145,991,968 - 146,016,042 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NMUR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110117,547,123 - 117,557,405 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604081,893,793 - 81,900,968 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nmur1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248434,655,198 - 4,659,942 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000016727   ⟹   ENSCLAP00000016563
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554534,120,110 - 4,124,927 (+)Ensembl
RefSeq Acc Id: XM_005395393   ⟹   XP_005395450
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554534,118,532 - 4,126,143 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005395450 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000016563
  ENSCLAP00000016563.1
Reference Protein Sequences
RefSeq Acc Id: XP_005395450   ⟸   XM_005395393
- UniProtKB: A0A8C2YQU8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000016563   ⟸   ENSCLAT00000016727
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000011387 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000016727 ENTREZGENE
  ENSCLAT00000016727.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  NeuromedU_rcpt UniProtKB/TrEMBL
  NeuromedU_rcpt_1 UniProtKB/TrEMBL
NCBI Gene Nmur1 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  NEUROMEDIN-U RECEPTOR 1 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  NEUROMEDINUR UniProtKB/TrEMBL
  NEUROMEDNU1R UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C2YQU8 ENTREZGENE, UniProtKB/TrEMBL