LOC102015580 (myosin regulatory light chain 12B) - Rat Genome Database

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Gene: LOC102015580 (myosin regulatory light chain 12B) Chinchilla lanigera
Analyze
Symbol: LOC102015580 (Ensembl: MYL12B)
Name: myosin regulatory light chain 12B
RGD ID: 8936301
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Myl12b; myosin, light chain 12B, regulatory
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554027,237,569 - 7,242,476 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554027,237,291 - 7,251,530 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000012972   ⟹   ENSCLAP00000012824
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554027,237,569 - 7,242,476 (-)Ensembl
RefSeq Acc Id: XM_005372655   ⟹   XP_005372712
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554027,237,291 - 7,251,530 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005372712 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000012824.1
Reference Protein Sequences
RefSeq Acc Id: XP_005372712   ⟸   XM_005372655
- UniProtKB: A0A8C2VD04 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000012824   ⟸   ENSCLAT00000012972
Protein Domains
EF-hand


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000008854 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000012972.1 UniProtKB/TrEMBL
Gene3D-CATH EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
NCBI Gene Myl12b ENTREZGENE
PANTHER MYOSIN REGULATORY LIGHT CHAIN 12B UniProtKB/TrEMBL
  MYOSIN REGULATORY LIGHT CHAIN 2 UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
SMART EFh UniProtKB/TrEMBL
Superfamily-SCOP SSF47473 UniProtKB/TrEMBL
UniProt A0A8C2VD04 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-25 LOC102015580  myosin regulatory light chain 12B  Myl12b  myosin, light chain 12B, regulatory  Symbol and/or name change 5135510 APPROVED