B4galt5 (beta-1,4-galactosyltransferase 5)

Gene: B4galt5 (beta-1,4-galactosyltransferase 5) Chinchilla lanigera

Analyze

Symbol:

B4galt5

Name:

beta-1,4-galactosyltransferase 5

RGD ID:

8894373

Description:

ENCODES a protein that exhibits N-acetyllactosamine synthase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN central nervous system myelination (ortholog); central nervous system neuron axonogenesis (ortholog); ganglioside biosynthetic process via lactosylceramide (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN Golgi apparatus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	8,534,220 - 8,559,672 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955445	8,471,684 - 8,559,672 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

COVID-19 (ISO)

Experimental Liver Cirrhosis (ISO)

juvenile rheumatoid arthritis (ISO)

multiple sclerosis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

central nervous system myelination (ISO)

central nervous system neuron axonogenesis (ISO)

ganglioside biosynthetic process via lactosylceramide (ISO)

glycosylation (ISO)

neuron maturation (ISO)

poly-N-acetyllactosamine biosynthetic process (ISO)

positive regulation of embryonic development (ISO)

protein glycosylation (ISO)

regulation of protein stability (ISO)

Cellular Component

Golgi apparatus (ISO)

Molecular Function

N-acetyllactosamine synthase activity (ISO)

protein binding (ISO)

UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

B4galt5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955445	8,534,220 - 8,559,672 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955445	8,471,684 - 8,559,672 (+)	NCBI	ChiLan1.0	ChiLan1.0

B4GALT5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	49,632,945 - 49,713,878 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	49,632,945 - 49,713,878 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	48,249,482 - 48,330,415 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	47,682,889 - 47,763,745 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	47,682,888 - 47,763,745	NCBI
Celera	20	44,954,098 - 45,035,021 (-)	NCBI		Celera
Cytogenetic Map	20	q13.13	NCBI
HuRef	20	44,998,184 - 45,021,953 (-)	NCBI		HuRef
CHM1_1	20	48,154,191 - 48,235,100 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	20	51,402,498 - 51,483,440 (-)	NCBI		T2T-CHM13v2.0

B4galt5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	167,140,364 - 167,191,155 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	167,140,364 - 167,191,103 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	167,298,444 - 167,349,178 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	167,298,444 - 167,349,183 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	167,123,944 - 167,174,678 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	166,992,266 - 167,040,388 (-)	NCBI		MGSCv36	mm8
Celera	2	173,239,050 - 173,289,822 (-)	NCBI		Celera
Cytogenetic Map	2	H3	NCBI
cM Map	2	87.22	NCBI

B4galt5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	176,437,073 - 176,453,001 (-)	NCBI		GRCr8
mRatBN7.2	3	156,018,056 - 156,033,983 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	156,018,053 - 156,070,074 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	159,819,606 - 159,835,546 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	168,318,584 - 168,334,523 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	166,060,292 - 166,076,232 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	164,039,731 - 164,055,561 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	164,039,731 - 164,095,878 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	170,196,325 - 170,211,612 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	158,440,189 - 158,449,419 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	158,349,006 - 158,397,606 (-)	NCBI
Celera	3	154,599,548 - 154,615,476 (-)	NCBI		Celera
Cytogenetic Map	3	q42	NCBI

B4GALT5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	55,381,362 - 55,462,019 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	55,374,468 - 55,455,125 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	45,977,801 - 46,058,429 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	47,042,479 - 47,123,209 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	47,041,469 - 47,123,214 (-)	Ensembl	panpan1.1		panPan2

B4GALT5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	36,220,973 - 36,241,482 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	36,221,189 - 36,300,804 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	35,462,952 - 35,538,860 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	36,925,343 - 37,001,298 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	36,925,564 - 37,001,902 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	36,166,534 - 36,242,395 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	36,303,207 - 36,376,262 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	36,842,820 - 36,918,775 (-)	NCBI		UU_Cfam_GSD_1.0

B4galt5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	189,221,713 - 189,282,986 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936514	4,719,052 - 4,736,635 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936514	4,719,198 - 4,736,638 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

B4GALT5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	51,259,813 - 51,334,020 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	51,257,273 - 51,334,566 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	57,578,640 - 57,655,502 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

B4GALT5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	14,270,945 - 14,357,052 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	14,271,141 - 14,354,159 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	62,756,661 - 62,840,309 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

B4galt5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624790	5,766,903 - 5,789,140 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624790	5,770,586 - 5,792,036 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005392328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013518294	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013518295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01039595	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01039596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01039597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01039598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01039599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01039600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01039601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01039602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01039603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBBH01033957	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000009192 ⟹ ENSCLAP00000009063

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955445	8,534,220 - 8,559,672 (+)	Ensembl

RefSeq Acc Id:

XM_005392328 ⟹ XP_005392385

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955445	8,471,684 - 8,559,672 (+)	NCBI

Sequence:

show sequence

ATGCAGCAGACGTTTGGCTGTCTAGAAAGGAGAAGGCCTCCTTGTCTGTCCATCCAGAATAGAC
CAGATATTATTGCTCTTACGTGAACACCTACTTCTTCATGATGCAGGCTCAAGGCATCCTGCTG
CGGGACAACGTGAGGACAATAGGTGCCCAGGTGTACGAGCAGGTGGTTCGCAGTGCTTACGCCA
AGAGAAACAGCAGCCTAAATGACTCAGATTACCCTCTTGACCTGAACCACAGCGAGTCCTTCCT
CCAAACCACAACGTTCCTTCCCGAAGACTTCACCTACTTCGCCAACCACCCTTGCCCGGAGAGG
CTCCCTTCCATGAAGGGCCCAATAGACATAAATATGAGTGAAATTGCAATGGATGACATCCATG
AACTCTTCTCCAGAGACCCAGCCATCAAGCTTGGAGGTCACTGGAAGCCTTCTGACTGCGTGCC
TCGATGGAAGGTGGCCATCCTTATCCCCTTCCGGAACCGCCACGAGCACCTCCCAGTCCTGCTC
AGACACCTGATCCCCATGCTTCAGCGGCAGCGCCTGCAGTTTGCATTTTATGTGGTTGAGCAAG
TTGGCAGTCAACCCTTTAATCGAGCCATGCTTTTCAACGTTGGTTTTCAAGAAGCAATGAAGGA
CTTGGATTGGGACTGTCTGATTTTTCATGATGTGGATCACATACCAGAAAGTGATCGCAACTAT
TATGGGTGTGGACAGATGCCCAGGCACTTTGCAACTAAATTGGATAAGTATATGTATCTGCTTC
CTTATACTGAGTTCTTTGGTGGAGTGAGTGGCTTAACGGTGGAACAGTTTCGGAAAATCAATGG
CTTTCCTAATGCTTTCTGGGGCTGGGGTGGAGAAGATGACGACCTCTGGAACAGAGTACAGAAT
GCAGGCTATTCTGTGAGCCGGCCCGAGGGGGACACGGGGAAGTACAAGTCCATCCCTCATCACC
ACAGAGGAGAGGTCCAGTTTCTTGGAAGGTACGCCCTGCTGAGGAAGTCCAAGGAGCGGCAGGC
GCTGGACGGCCTCAACAACCTGAACTACTTTGCAAATATCACATATGACGCCTTGTATAAGAAC
ATCACTGTCAACTTGACACCCGAGCTGGCTCAGGTGGACGAGTACTGAGGGGAGAAGCACGTGG
GCCTTGCCACCACCACAGAACTCGTCAGGTGACCTGTCTGGGGTCGCCACAGAAGAGACTAGAA
ACAAAGTCTAATGAAGGACCACAGGGTTCCAGGGAAAACTGTGACAGTACACGCACAAACGCCT
TCACTGTAGGACCCGCGGGGCCCGAGGAGTCATCTCCGGACACCCCTCGACAGCACTGGCTTCT
CGTCCTGCTGTGCACCCCATCTCCCACCTCAGCGCCCCGTCTTCACCGCACTGTCCGCAGCGCC
TGACAGGCTGGGAGCCGCCCGGGCCGTCGTGGGCTGCCGCTGTGAACGCCTTTGGAGCCCAGCG
CGCCCCGGCCTGGGCGGCCGCGGCCAGAAGCCGATGGAACGCCGCGCCGTTCTGTGCATCTCTG
GCGTTCTCTTTGGCTTCATTTTTTAAAAAATTACCTGCTTTGGGTGGGGATTGAGGGTGGAAGG
GAGGGATTTGGGGGTGATAGACATAAATATATAACAGTCACTTCTTGAAGAAGTATAATTGTAA
ATAAGCCATGTAAAATGCCTTTTTTAAATTTAATTTTATAGCTGGCTCCAATTCAAAGTGAGGA
TTTATACATTAGATCACATATTTGGTTGGCAAATGCAGGAACTCAGTTAAAATGCAATTGAAGA
ATATCATCTCCCAAACTGCTGTCGTCTTGAAAGGGAGTGGATACAGGGCCTGTCCCCGAACAAG
CGAATCCCCTTTCTCCCCGAAGCTGACCTCTCCCTCCCCTCTCCTCTCCCAGGGCTCTTGCTCT
TTCTGTCTGCTGTGGCCCCGCCTCCTGGTGGCCAGGCACACTCGCCCCCCAGGCCTGTGCTGGA
CAGGAGGCCGCTGCTGTGGGGCGCACTGCCGTCCCTGCCCGCAGCTGACCGCGGTGCTCTCTGT
GTGTGCGCCGGCGCTCTGGACTTGCGTTTTGTTCTGTCTCCTGTGGAACCGGGCCCGGTGTCTG
AGAGCTGTGCCTAAACGACAGCTGGCTTCAGGGATTCCTGTTTCCCTTGTGTTCCGGAAAGATG
CTTTGTCCGCAGTGACTTGGGTGTGCTCCATGGAAGTGAGGAGCGGCTGCAGCGGGAAGAAGGC
AGCCAGGGTGCAGGTGACACTTGCGTGCTGTGCGGCAGCCGGGCTCCAGGAGAGACCGCGTCAG
AGCTTTGAGGTGTAGGCTAGCAGGCTCCCGCGTTCCTGAAGTTGGATTCTAAATTGCATTTGAA
TTTGTGCCTCTTTGTTTTTCCCTGAGCCAACGCCCTCGGTTTATATTTCTGGCCCTTTCTGCAG
AATTCTGGAAGATGCCAGGTTTTTTTCCCCCTCCTTTTCCATAAAACATATTTATATATTGTGA
GTAGGAGTACTTTCTGAAGAGTGCTTCATATTTTTTTTAATTGCCTTGTTTGCCTTCAACTTCT
TAATTTTCATGGTTTACATGGGTGTGTGTAGGGGCGTGTGTATCTGTGTGCATTGGGGTTTTTC
CGCTGCATGTGTTGGTTCCGTGGACGTATGATCCCCACACACTGTGGGAGTGATTGGCCAGGCC
TTGTTTTTTTGTTCGTGTGCTTGTTCTTTTGAAGAACAGAGTGGTATTTAGGAAATAAATTGCA
GCACTCTTATCGGCTCATATGAGAGAGCAGATGCCTGCCCTTGACAGTGCTGGTAAGTTGTATC
ATACATTGTAAAAGAGTTGTAAGCATTTCATGCTTTAAAACACCTTCACAAGAGAACATCGTAC
AGA

hide sequence

RefSeq Acc Id:

XM_013518294 ⟹ XP_013373748

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955445	8,471,696 - 8,559,672 (+)	NCBI

Sequence:

show sequence

TTTGGCTGTCTAGAAAGGAGAAGGCCTCCTTGTCTGTCCATCCAGAATAGACCAGATATTATTG
CTCTTACGTGAACACCTACTTCTTCATGATGCAGGCTCAAGGCATCCTGCTGCGGGACAACGTG
AGGACAATAGGTGCCCAGGTGTACGAGCAGGTGGTTCGCAGTGCTTACGCCAAGAGAAACAGCA
GCCTAAATGACTCAGATTACCCTCTTGACCTGAACCACAGCGAGTCCTTCCTCCAAACCACAAC
GTTCCTTCCCGAAGACTTCACCTACTTCGCCAACCACCCTTGCCCGGAGAGGCTCCCTTCCATG
AAGGGCCCAATAGACATAAATATGAGTGAAATTGCAATGGATGACATCCATGAACTCTTCTCCA
GAGACCCAGCCATCAAGCTTGGAGGTCACTGGAAGCCTTCTGACTGCGTGCCTCGATGGAAGGT
GGCCATCCTTATCCCCTTCCGGAACCGCCACGAGCACCTCCCAGTCCTGCTCAGACACCTGATC
CCCATGCTTCAGCGGCAGCGCCTGCAGTTTGCATTTTATGTGGTTGAGCAAGTTGGCAGTCAAC
CCTTTAATCGAGCCATGCTTTTCAACGTTGGTTTTCAAGAAGCAATGAAGGACTTGGATTGGGA
CTGTCTGATTTTTCATGATGTGGATCACATACCAGAAAGTGATCGCAACTATTATGGGTGTGGA
CAGATGCCCAGGCACTTTGCAACTAAATTGGATAAGTATATGTATCTGCTTCCTTATACTGAGT
TCTTTGGTGGAGTGAGTGGCTTAACGGTGGAACAGTTTCGGAAAATCAATGGCTTTCCTAATGC
TTTCTGGGGCTGGGGTGGAGAAGATGACGACCTCTGGAACAGGTACGCCCTGCTGAGGAAGTCC
AAGGAGCGGCAGGCGCTGGACGGCCTCAACAACCTGAACTACTTTGCAAATATCACATATGACG
CCTTGTATAAGAACATCACTGTCAACTTGACACCCGAGCTGGCTCAGGTGGACGAGTACTGAGG
GGAGAAGCACGTGGGCCTTGCCACCACCACAGAACTCGTCAGGTGACCTGTCTGGGGTCGCCAC
AGAAGAGACTAGAAACAAAGTCTAATGAAGGACCACAGGGTTCCAGGGAAAACTGTGACAGTAC
ACGCACAAACGCCTTCACTGTAGGACCCGCGGGGCCCGAGGAGTCATCTCCGGACACCCCTCGA
CAGCACTGGCTTCTCGTCCTGCTGTGCACCCCATCTCCCACCTCAGCGCCCCGTCTTCACCGCA
CTGTCCGCAGCGCCTGACAGGCTGGGAGCCGCCCGGGCCGTCGTGGGCTGCCGCTGTGAACGCC
TTTGGAGCCCAGCGCGCCCCGGCCTGGGCGGCCGCGGCCAGAAGCCGATGGAACGCCGCGCCGT
TCTGTGCATCTCTGGCGTTCTCTTTGGCTTCATTTTTTAAAAAATTACCTGCTTTGGGTGGGGA
TTGAGGGTGGAAGGGAGGGATTTGGGGGTGATAGACATAAATATATAACAGTCACTTCTTGAAG
AAGTATAATTGTAAATAAGCCATGTAAAATGCCTTTTTTAAATTTAATTTTATAGCTGGCTCCA
ATTCAAAGTGAGGATTTATACATTAGATCACATATTTGGTTGGCAAATGCAGGAACTCAGTTAA
AATGCAATTGAAGAATATCATCTCCCAAACTGCTGTCGTCTTGAAAGGGAGTGGATACAGGGCC
TGTCCCCGAACAAGCGAATCCCCTTTCTCCCCGAAGCTGACCTCTCCCTCCCCTCTCCTCTCCC
AGGGCTCTTGCTCTTTCTGTCTGCTGTGGCCCCGCCTCCTGGTGGCCAGGCACACTCGCCCCCC
AGGCCTGTGCTGGACAGGAGGCCGCTGCTGTGGGGCGCACTGCCGTCCCTGCCCGCAGCTGACC
GCGGTGCTCTCTGTGTGTGCGCCGGCGCTCTGGACTTGCGTTTTGTTCTGTCTCCTGTGGAACC
GGGCCCGGTGTCTGAGAGCTGTGCCTAAACGACAGCTGGCTTCAGGGATTCCTGTTTCCCTTGT
GTTCCGGAAAGATGCTTTGTCCGCAGTGACTTGGGTGTGCTCCATGGAAGTGAGGAGCGGCTGC
AGCGGGAAGAAGGCAGCCAGGGTGCAGGTGACACTTGCGTGCTGTGCGGCAGCCGGGCTCCAGG
AGAGACCGCGTCAGAGCTTTGAGGTGTAGGCTAGCAGGCTCCCGCGTTCCTGAAGTTGGATTCT
AAATTGCATTTGAATTTGTGCCTCTTTGTTTTTCCCTGAGCCAACGCCCTCGGTTTATATTTCT
GGCCCTTTCTGCAGAATTCTGGAAGATGCCAGGTTTTTTTCCCCCTCCTTTTCCATAAAACATA
TTTATATATTGTGAGTAGGAGTACTTTCTGAAGAGTGCTTCATATTTTTTTTAATTGCCTTGTT
TGCCTTCAACTTCTTAATTTTCATGGTTTACATGGGTGTGTGTAGGGGCGTGTGTATCTGTGTG
CATTGGGGTTTTTCCGCTGCATGTGTTGGTTCCGTGGACGTATGATCCCCACACACTGTGGGAG
TGATTGGCCAGGCCTTGTTTTTTTGTTCGTGTGCTTGTTCTTTTGAAGAACAGAGTGGTATTTA
GGAAATAAATTGCAGCACTCTTATCGGCTCATATGAGAGAGCAGATGCCTGCCCTTGACAGTGC
TGGTAAGTTGTATCATACATTGTAAAAGAGTTGTAAGCATTTCATGCTTTAAAACACCTTCACA
AGAGAACATCGTACAGA

hide sequence

RefSeq Acc Id:

XM_013518295 ⟹ XP_013373749

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955445	8,471,695 - 8,559,672 (+)	NCBI

Sequence:

show sequence

GTTTGGCTGTCTAGAAAGGAGAAGGCCTCCTTGTCTGTCCATCCAGAATAGACCAGATATTATT
GCTCTTACGTGAACACCTACTTCTTCATGATGCAGGCTCAAGGCATCCTGCTGCGGGACAACGT
GAGGACAATAGGTGCCCAGGTGTACGAGCAGGTGGTTCGCAGTGCTTACGCCAAGAGAAACAGC
AGCCTAAATGACTCAGATTACCCTCTTGACCTGAACCACAGCGAGTCCTTCCTCCAAACCACAA
CGTTCCTTCCCGAAGACTTCACCTACTTCGCCAACCACCCTTGCCCGGAGAGGCTCCCTTCCAT
GAAGGGCCCAATAGACATAAATATGAGTGAAATTGCAATGGATGACATCCATGAACTCTTCTCC
AGAGACCCAGCCATCAAGCTTGGAGGTCACTGGAAGCCTTCTGACTGCGTGCCTCGATGGAAGG
TTGGCAGTCAACCCTTTAATCGAGCCATGCTTTTCAACGTTGGTTTTCAAGAAGCAATGAAGGA
CTTGGATTGGGACTGTCTGATTTTTCATGATGTGGATCACATACCAGAAAGTGATCGCAACTAT
TATGGGTGTGGACAGATGCCCAGGCACTTTGCAACTAAATTGGATAAGTATATGTATCTGCTTC
CTTATACTGAGTTCTTTGGTGGAGTGAGTGGCTTAACGGTGGAACAGTTTCGGAAAATCAATGG
CTTTCCTAATGCTTTCTGGGGCTGGGGTGGAGAAGATGACGACCTCTGGAACAGAGTACAGAAT
GCAGGCTATTCTGTGAGCCGGCCCGAGGGGGACACGGGGAAGTACAAGTCCATCCCTCATCACC
ACAGAGGAGAGGTCCAGTTTCTTGGAAGGTACGCCCTGCTGAGGAAGTCCAAGGAGCGGCAGGC
GCTGGACGGCCTCAACAACCTGAACTACTTTGCAAATATCACATATGACGCCTTGTATAAGAAC
ATCACTGTCAACTTGACACCCGAGCTGGCTCAGGTGGACGAGTACTGAGGGGAGAAGCACGTGG
GCCTTGCCACCACCACAGAACTCGTCAGGTGACCTGTCTGGGGTCGCCACAGAAGAGACTAGAA
ACAAAGTCTAATGAAGGACCACAGGGTTCCAGGGAAAACTGTGACAGTACACGCACAAACGCCT
TCACTGTAGGACCCGCGGGGCCCGAGGAGTCATCTCCGGACACCCCTCGACAGCACTGGCTTCT
CGTCCTGCTGTGCACCCCATCTCCCACCTCAGCGCCCCGTCTTCACCGCACTGTCCGCAGCGCC
TGACAGGCTGGGAGCCGCCCGGGCCGTCGTGGGCTGCCGCTGTGAACGCCTTTGGAGCCCAGCG
CGCCCCGGCCTGGGCGGCCGCGGCCAGAAGCCGATGGAACGCCGCGCCGTTCTGTGCATCTCTG
GCGTTCTCTTTGGCTTCATTTTTTAAAAAATTACCTGCTTTGGGTGGGGATTGAGGGTGGAAGG
GAGGGATTTGGGGGTGATAGACATAAATATATAACAGTCACTTCTTGAAGAAGTATAATTGTAA
ATAAGCCATGTAAAATGCCTTTTTTAAATTTAATTTTATAGCTGGCTCCAATTCAAAGTGAGGA
TTTATACATTAGATCACATATTTGGTTGGCAAATGCAGGAACTCAGTTAAAATGCAATTGAAGA
ATATCATCTCCCAAACTGCTGTCGTCTTGAAAGGGAGTGGATACAGGGCCTGTCCCCGAACAAG
CGAATCCCCTTTCTCCCCGAAGCTGACCTCTCCCTCCCCTCTCCTCTCCCAGGGCTCTTGCTCT
TTCTGTCTGCTGTGGCCCCGCCTCCTGGTGGCCAGGCACACTCGCCCCCCAGGCCTGTGCTGGA
CAGGAGGCCGCTGCTGTGGGGCGCACTGCCGTCCCTGCCCGCAGCTGACCGCGGTGCTCTCTGT
GTGTGCGCCGGCGCTCTGGACTTGCGTTTTGTTCTGTCTCCTGTGGAACCGGGCCCGGTGTCTG
AGAGCTGTGCCTAAACGACAGCTGGCTTCAGGGATTCCTGTTTCCCTTGTGTTCCGGAAAGATG
CTTTGTCCGCAGTGACTTGGGTGTGCTCCATGGAAGTGAGGAGCGGCTGCAGCGGGAAGAAGGC
AGCCAGGGTGCAGGTGACACTTGCGTGCTGTGCGGCAGCCGGGCTCCAGGAGAGACCGCGTCAG
AGCTTTGAGGTGTAGGCTAGCAGGCTCCCGCGTTCCTGAAGTTGGATTCTAAATTGCATTTGAA
TTTGTGCCTCTTTGTTTTTCCCTGAGCCAACGCCCTCGGTTTATATTTCTGGCCCTTTCTGCAG
AATTCTGGAAGATGCCAGGTTTTTTTCCCCCTCCTTTTCCATAAAACATATTTATATATTGTGA
GTAGGAGTACTTTCTGAAGAGTGCTTCATATTTTTTTTAATTGCCTTGTTTGCCTTCAACTTCT
TAATTTTCATGGTTTACATGGGTGTGTGTAGGGGCGTGTGTATCTGTGTGCATTGGGGTTTTTC
CGCTGCATGTGTTGGTTCCGTGGACGTATGATCCCCACACACTGTGGGAGTGATTGGCCAGGCC
TTGTTTTTTTGTTCGTGTGCTTGTTCTTTTGAAGAACAGAGTGGTATTTAGGAAATAAATTGCA
GCACTCTTATCGGCTCATATGAGAGAGCAGATGCCTGCCCTTGACAGTGCTGGTAAGTTGTATC
ATACATTGTAAAAGAGTTGTAAGCATTTCATGCTTTAAAACACCTTCACAAGAGAACATCGTAC
AGA

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Protein Sequences


Protein RefSeqs	XP_005392385	(Get FASTA)	NCBI Sequence Viewer
	XP_013373748	(Get FASTA)	NCBI Sequence Viewer
	XP_013373749	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000009063
	ENSCLAP00000009063.1

RefSeq Acc Id:	XP_005392385 ⟸ XM_005392328
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V8F4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMQAQGILLRDNVRTIGAQVYEQVVRSAYAKRNSSLNDSDYPLDLNHSESFLQTTTFLPEDFTY FANHPCPERLPSMKGPIDINMSEIAMDDIHELFSRDPAIKLGGHWKPSDCVPRWKVAILIPFRN RHEHLPVLLRHLIPMLQRQRLQFAFYVVEQVGSQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVD HIPESDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGED DDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQALDGLNNLNYFAN ITYDALYKNITVNLTPELAQVDEY hide sequence

RefSeq Acc Id:	XP_013373749 ⟸ XM_013518295
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2V8F4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMQAQGILLRDNVRTIGAQVYEQVVRSAYAKRNSSLNDSDYPLDLNHSESFLQTTTFLPEDFTY FANHPCPERLPSMKGPIDINMSEIAMDDIHELFSRDPAIKLGGHWKPSDCVPRWKVGSQPFNRA MLFNVGFQEAMKDLDWDCLIFHDVDHIPESDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGV SGLTVEQFRKINGFPNAFWGWGGEDDDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLG RYALLRKSKERQALDGLNNLNYFANITYDALYKNITVNLTPELAQVDEY hide sequence

RefSeq Acc Id:	XP_013373748 ⟸ XM_013518294
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2V8F4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMQAQGILLRDNVRTIGAQVYEQVVRSAYAKRNSSLNDSDYPLDLNHSESFLQTTTFLPEDFTY FANHPCPERLPSMKGPIDINMSEIAMDDIHELFSRDPAIKLGGHWKPSDCVPRWKVAILIPFRN RHEHLPVLLRHLIPMLQRQRLQFAFYVVEQVGSQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVD HIPESDRNYYGCGQMPRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGED DDLWNRYALLRKSKERQALDGLNNLNYFANITYDALYKNITVNLTPELAQVDEY hide sequence

RefSeq Acc Id:

ENSCLAP00000009063 ⟸ ENSCLAT00000009192

Protein Domains

Galactosyltransferase C-terminal Galactosyltransferase N-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000006323	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000009192	ENTREZGENE
	ENSCLAT00000009192.1	UniProtKB/TrEMBL
InterPro	Galactosyl_T	UniProtKB/TrEMBL
	Galactosyl_T_C	UniProtKB/TrEMBL
	Galactosyl_T_N	UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/TrEMBL
NCBI Gene	B4galt5	ENTREZGENE
PANTHER	BETA-1,4-GALACTOSYLTRANSFERASE 5	UniProtKB/TrEMBL
	PTHR19300	UniProtKB/TrEMBL
Pfam	Glyco_transf_7C	UniProtKB/TrEMBL
	Glyco_transf_7N	UniProtKB/TrEMBL
PRINTS	B14GALTRFASE	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53448	UniProtKB/TrEMBL
UniProt	A0A8C2V8F4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	B4galt5	beta-1,4-galactosyltransferase 5		UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD