Rgs22 (regulator of G protein signaling 22) - Rat Genome Database

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Gene: Rgs22 (regulator of G protein signaling 22) Chinchilla lanigera
Analyze
Symbol: Rgs22
Name: regulator of G protein signaling 22
RGD ID: 8877264
Description: ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); ASSOCIATED WITH Cohen syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: regulator of G-protein signaling 22
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541715,282,428 - 15,382,842 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541715,284,368 - 15,381,984 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
Rgs22
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541715,282,428 - 15,382,842 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541715,284,368 - 15,381,984 (-)NCBIChiLan1.0ChiLan1.0
RGS22
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38899,960,936 - 100,106,049 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl899,960,936 - 100,131,268 (-)EnsemblGRCh38hg38GRCh38
GRCh378100,973,164 - 101,118,277 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368101,042,452 - 101,187,520 (-)NCBINCBI36Build 36hg18NCBI36
Celera897,158,760 - 97,303,753 (-)NCBICelera
Cytogenetic Map8q22.2NCBI
HuRef896,176,263 - 96,321,168 (-)NCBIHuRef
CHM1_18101,014,019 - 101,158,680 (-)NCBICHM1_1
T2T-CHM13v2.08101,085,830 - 101,230,841 (-)NCBIT2T-CHM13v2.0
Rgs22
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391535,960,664 - 36,140,718 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1536,009,625 - 36,140,546 (-)EnsemblGRCm39 Ensembl
GRCm381535,960,508 - 36,140,572 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1536,009,479 - 36,140,400 (-)EnsemblGRCm38mm10GRCm38
MGSCv371535,939,234 - 36,070,149 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361536,110,459 - 36,242,758 (-)NCBIMGSCv36mm8
MGSCv361535,954,066 - 36,087,454 (-)NCBIMGSCv36mm8
Celera1536,635,165 - 36,768,269 (-)NCBICelera
Cytogenetic Map15B3.1NCBI
cM Map1514.46NCBI
Rgs22
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8769,073,681 - 69,194,041 (-)NCBIGRCr8
mRatBN7.2767,188,531 - 67,308,805 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl767,188,519 - 67,308,875 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0774,783,009 - 74,902,049 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl774,783,019 - 74,901,997 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0774,941,150 - 75,058,259 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4771,526,062 - 71,645,945 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera764,271,329 - 64,390,770 (-)NCBICelera
Cytogenetic Map7q22NCBI
RGS22
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27117,308,618 - 117,455,336 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1892,847,523 - 92,994,141 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0896,601,282 - 96,747,195 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1898,775,639 - 98,920,786 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl898,775,639 - 98,920,786 (-)Ensemblpanpan1.1panPan2
RGS22
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1131,897,525 - 2,026,622 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl131,864,010 - 2,010,594 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha131,893,394 - 2,027,515 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0132,050,963 - 2,179,426 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl132,048,119 - 2,179,537 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1131,893,147 - 2,023,881 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0132,006,459 - 2,135,926 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0132,008,063 - 2,140,187 (-)NCBIUU_Cfam_GSD_1.0
Rgs22
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530335,686,561 - 35,794,613 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647043,122,822 - 43,219,279 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647043,135,410 - 43,225,788 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RGS22
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl436,886,588 - 37,041,502 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1436,883,805 - 37,042,885 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2439,835,139 - 39,958,926 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RGS22
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1894,806,493 - 94,950,188 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl894,805,855 - 94,937,451 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603945,732,076 - 45,883,975 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rgs22
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247636,923,087 - 7,037,726 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla_female_1.0 EnsemblNW_0046247637,049,018 - 7,060,246 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247636,922,059 - 7,059,827 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000006572   ⟹   ENSCLAP00000006465
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541715,282,428 - 15,382,842 (-)Ensembl
RefSeq Acc Id: ENSCLAT00000006573   ⟹   ENSCLAP00000006466
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495541715,282,428 - 15,382,842 (-)Ensembl
RefSeq Acc Id: XM_013512826   ⟹   XP_013368280
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495541715,284,368 - 15,381,984 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013368280 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000006465
  ENSCLAP00000006465.1
  ENSCLAP00000006466.1
Reference Protein Sequences
RefSeq Acc Id: XP_013368280   ⟸   XM_013512826
- UniProtKB: A0A8C2UWJ4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000006466   ⟸   ENSCLAT00000006573
RefSeq Acc Id: ENSCLAP00000006465   ⟸   ENSCLAT00000006572
Protein Domains
RGS


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000004565 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000006572 ENTREZGENE
  ENSCLAT00000006572.1 UniProtKB/TrEMBL
  ENSCLAT00000006573.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.167.10 UniProtKB/TrEMBL
InterPro RGS UniProtKB/TrEMBL
  Rgs22 UniProtKB/TrEMBL
  RGS22_RGS_fourth UniProtKB/TrEMBL
  RGS22_RGS_second UniProtKB/TrEMBL
  RGS22_RGS_third UniProtKB/TrEMBL
  RGS_sf UniProtKB/TrEMBL
  RGS_subdomain_2 UniProtKB/TrEMBL
NCBI Gene Rgs22 ENTREZGENE
PANTHER PTHR46583 UniProtKB/TrEMBL
  REGULATOR OF G-PROTEIN SIGNALING 22 UniProtKB/TrEMBL
Pfam RGS UniProtKB/TrEMBL
PROSITE RGS UniProtKB/TrEMBL
SMART RGS UniProtKB/TrEMBL
Superfamily-SCOP SSF48097 UniProtKB/TrEMBL
UniProt A0A8C2UWJ4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2YL14_CHILA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-08-29 Rgs22  regulator of G protein signaling 22    regulator of G-protein signaling 22  Symbol and/or name change 5135510 APPROVED