Gpatch1 (G-patch domain containing 1)

Gene: Gpatch1 (G-patch domain containing 1) Chinchilla lanigera

Analyze

Symbol:

Gpatch1

Name:

G-patch domain containing 1

RGD ID:

8867716

Description:

ASSOCIATED WITH acute myeloid leukemia (ortholog); hereditary spastic paraplegia 75 (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

G patch domain containing 1; G patch domain-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955574	569,204 - 609,323 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute myeloid leukemia (ISO)

hereditary spastic paraplegia 75 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

catalytic step 2 spliceosome (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Gpatch1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955574	569,204 - 609,323 (+)	NCBI	ChiLan1.0	ChiLan1.0

GPATCH1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	33,081,181 - 33,130,542 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	33,080,899 - 33,130,542 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	33,572,087 - 33,621,448 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	38,263,626 - 38,313,158 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	38,263,625 - 38,313,158	NCBI
Celera	19	30,265,376 - 30,314,942 (+)	NCBI		Celera
Cytogenetic Map	19	q13.11	NCBI
HuRef	19	30,074,090 - 30,123,661 (+)	NCBI		HuRef
CHM1_1	19	33,572,862 - 33,622,386 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	35,599,866 - 35,649,224 (+)	NCBI		T2T-CHM13v2.0

Gpatch1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	34,975,969 - 35,017,865 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	34,975,961 - 35,017,865 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	35,238,912 - 35,318,748 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	35,276,536 - 35,318,440 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	36,061,563 - 36,103,459 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	34,985,304 - 35,027,200 (-)	NCBI		MGSCv36	mm8
Celera	7	30,417,449 - 30,457,710 (-)	NCBI		Celera
Cytogenetic Map	7	B2	NCBI
cM Map	7	21.27	NCBI

Gpatch1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	97,062,539 - 97,111,487 (-)	NCBI		GRCr8
mRatBN7.2	1	87,925,606 - 87,974,544 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	87,925,618 - 87,974,544 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	93,331,885 - 93,380,690 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	101,797,854 - 101,846,668 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	95,090,181 - 95,138,992 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	91,529,096 - 91,578,032 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	91,529,112 - 91,578,048 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	92,659,066 - 92,707,992 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	87,793,196 - 87,833,003 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	87,871,321 - 87,911,112 (-)	NCBI
Celera	1	82,275,388 - 82,324,013 (-)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

GPATCH1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	39,055,200 - 39,103,183 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	41,054,327 - 41,103,978 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	30,004,150 - 30,052,802 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	38,749,073 - 38,800,413 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	38,749,078 - 38,800,166 (+)	Ensembl	panpan1.1		panPan2

GPATCH1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	119,009,605 - 119,052,676 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	119,009,609 - 119,053,140 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	118,409,808 - 118,452,887 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	119,608,222 - 119,651,412 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	119,608,228 - 119,651,359 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	119,174,089 - 119,216,907 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	118,794,999 - 118,838,077 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	119,854,102 - 119,897,209 (-)	NCBI		UU_Cfam_GSD_1.0

Gpatch1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	8,891,724 - 8,941,036 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936570	2,705,096 - 2,753,880 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936570	2,704,848 - 2,754,256 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GPATCH1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	42,895,517 - 42,941,558 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	42,895,488 - 42,941,560 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	38,448,999 - 38,488,066 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GPATCH1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666073	5,708,076 - 5,755,484 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gpatch1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624832	7,042,790 - 7,079,688 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624832	7,042,401 - 7,079,554 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005413834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013509577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01075111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01075112	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01225031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_005413834 ⟹ XP_005413891

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955574	569,204 - 609,323 (+)	NCBI

Sequence:

show sequence

GCCCGGAAGGGCTCAGGATGGCGGCGCTGCACGGTGACAGCGAGGAGGACCTGGTCAGCTATGG
GACGGGCCTGGAGCCTCTGGAAGAAGGTGAAAGACCAAAGAAACCAATTCCTCTGCAGGATCAG
ACTGTCAGAGATGAAAAGGGAAGGTATAAGCGATTTCATGGAGCCTTTAGTGGCGGTTTCTCTG
CTGGGTACTTCAATACTGTTGGCTCAAAAGAAGGATGGACACCTTCCACCTATGTGTCTTCACG
ACAGAATAGGGCAGACAGATCTGTTCTTGGTCCTGAAGATTTCATGGATGAAGAGGATCTTAGT
GAATTTGGGATAGCACCTAAAGCAATTGTTACCACAGATGATTTTGCTTCCAAAACCAAAGATA
AAATACAAGAAAAGGCCAGACAGTTGGCAGCTGCCACTGCCCCGATTCCCGGAGCCACTCTGCT
TGATGACTTCATAACACCAGCAAAGTTATCTATTGGTTTTGAACTGCTAAGAAAAATGGGTTGG
AAAGAGGGACAAGGAATCGGTCCTCGAACAAAGAGAAAGCCACGCCGACAAAAACCTGATCCCG
GAGTAAAAATCTATGGCTGTGCATTACCCCCTGGAGGCTCTGAAGGATCAGAGGATGAAGATGA
CGACTACTTGCCCGAAAATGTGACCTTTGCCCCCAAAGACGTCACCCCTGTGGATTTCACACCG
AAGGACAATGTGCACGGGCTGGCGTACAAGGGCCTGGATCCACACCAAGCACTGTTTGGAACTT
CGGCTGAACATGTTAATCTTTTCAGTGGAGGAGCTGAGGGAGCCGGCAATCTTCTTGGAGAAGC
TGGACTAAATAAAGGGAGAAAGCTGGGAATTTCAGGCCAGGCTTTTGGCGTTGGTGCCCTAGAA
GAGGAAGATGATGATATTTATGCCACAGAAACGCTGTCCAGGTATGACACTGTCCTGAAGGACG
AGGAGCCTGGAGATGGCCTGTACGGCTGGACGGCACCCAGGCAGTATAGAAATCAGAAAGAATC
GGAGAAAGATCTTCGATATATTGGCAAAATTTTGGATGGATTTTCCCTGGCTTCTAAACCTTTA
TCATCTAAAAAAATTTATCCGCCCCCTGAGTTGCCAAGGGACTATCGACCAGTGCATTATTTCC
GACCCGTGGTCGCCGCCACCTCCGAGAACTCCCATTTGCTTCAGGTGTTATCCGAGTCAGCCGG
AAAGGCAGCGCACGAGCCAGCGACACACAGTAGGCACCAACTGAATGCCTCCAAGCGGGGGGAG
TTGCTAGGAGAGACGCCAGCCCAAGGTTCAGCAACTTCCGTGTTAGAGTTTCTGTCCCAAAAAG
ACAGAGAGAGGATCAAAGAAATGAAGCAGGCAACTGAGCTGAAAGCAGCGCAGCTCCAGGCCAG
GAGTCTGGCACAGAGGGCGGCAAGCAGCAGAGCTGGGCCCTCGTCACCGGACGTTGGACACAGC
TCTTGGCACGTGGCCCTGGGTGGCGCGACAGCCCCCGCCAGAGCCAGCAACTTCAGACCTTTTG
CTAAAGATCCAGAGAAGCAGAAACGATACGAAGAGTTCTTAGCGCATATGAAAAAGGGTCGGAA
AGATGCCCTGGAGCGCTGCCTGGACCCCAGCATGACCGAGTGGGAGCGCGGCCGCGAGCGGGAA
GAGTTCGCGCGGGCGGCGCAGCTGTACACGGCTTCCCACTCGACCCTGTCCTCCAGGTTCACGC
ACGCCAAGGAGGAGGACGACTCAGAGCAAGTAGAAGTTCCTCGAGACCAAGAGAACGATGTCAG
TGACAAGCAGTCCGCTGTGAAGATGAAGATGTTCGGGAAGTTGACCCGAGACGCATTTGAGTGG
CACCCTGACAAGCTTCTGTGTAAGAGGTTCAATGTCCCAGATCCCTATCCAGGTTCCACGTTAG
TTGGCTTACCAAGGGTGAAGCGTGACAAATACTCGGTCTTCAACTTTCTGACGCTCCCTGAGCC
CACCTCCTCGCCCGCAGCGCAAGCATCCAGTGAAAAAGCCCCGCAGCCCCGAGAGTCAAGGAAG
CCGTCCAGATGGGATGCATCTCAACATGAAAAAAAGGAAGATTCTATTAGTGAATTTTTAAGTT
TGGCTAGATCGAAAGTGGGTCCTACTAAACAAGAGCCTGGTCCCTCGGTGAACAAAGAGGAAGA
GCGTGCACCGGAATCCCTGTCAAATAAGCCGGCAGATGGAGGTGCGGACCTGCAGACTGAGGCA
GAAGGGAGCCGCCCGCCCATGGACCTGTTCAAGGCCATCTTCGCCGGCTCCTCGGAGTCCTCGT
CGGAGGAGGAAGAGGAAGAGGACAGCGAGGACGAGCAGGCGGGTCCGGCGGAGGCCGCCTTCGG
AGGCTCCCAGGACACGGCCGTGGGGGAGGCCGCATCTGTGGCCCGTGCTCCTGAGCCGGCGCCC
CCGGAGCCCGCCCCGGCGCCCCCGGAGCCCCCGGAGCCCACCCCGGCGCCTCCCTTCCCGATCC
AGAAGATGCGGCTGGAGGAGCGGGAAGAGTTCGGCCCGCGGCTGCCGCCCGTCTTCTGCCCCAA
TGCTCGTCAGAAACCTGAGACTCCCCAAAAAGAGAAATATAAAAAGAACAAAGAAAGACACAAG
CTCAAGAAAGACCACAAACGAAAGAAGGAAAAGAAAAAGAAACACAAGAAGCACAAACATAAAA
GCAAACAAAAGACTAAAAAATCAGAGAAAAGCAGCAGTTCGGAGAGCACCGACAGCCAAGACAG
TCAGAGTGACGGAGGGGGGACCCCCGACCTGTCCCCTCAGGAGCTGCTGCGACGGCTGAAATGT
CTCCCGCTAAAGCGGCCATGACTGAATCCTGCCCGGCCTGTCTCAGAGTCATATCCGCTCCGGG
AAGGAAGCTCACCGATTGTTCAGTGAACAAACACATTGTACAGATTGTATTTATATGTAAATTG
ATGCTGTAAAATAATTTTTAAAACCTTGACATTTGAAAGGTTGCAGAAATTGATTTCTATTTTT
AATTTCAGTGAGTGTCAGAGGGAAAAGTTCAGACGGAGCAGTTTAATAATTAAAGTGGCATTCT
TTCCCG

hide sequence

RefSeq Acc Id:

XM_013509577 ⟹ XP_013365031

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955574	569,204 - 609,323 (+)	NCBI

Sequence:

show sequence

GCCCGGAAGGGCTCAGGATGGCGGCGCTGCACGGTGACAGCGAGGAGGACCTGGTCAGCTATGG
GACGGGCCTGGAGCCTCTGGAAGAAGGTGAAAGACCAAAGAAACCAATTCCTCTGCAGGATCAG
ACTGTCAGAGATGAAAAGGGAAGGTATAAGCGATTTCATGGAGCCTTTAGTGGCGGTTTCTCTG
CTGGGTACTTCAATACTGTTGGCTCAAAAGAAGGATGGACACCTTCCACCTATGTGTCTTCACG
ACAGAATAGGGCAGACAGATCTGTTCTTGGTCCTGAAGATTTCATGGATGAAGAGGATCTTAGT
GAATTTGGGATAGCACCTAAAGCAATTGTTACCACAGATGATTTTGCTTCCAAAACCAAAGATA
AAATACAAGAAAAGGCCAGACAGTTGGCAGCTGCCACTGCCCCGATTCCCGGAGCCACTCTGCT
TGATGACTTCATAACACCAGCAAAGTTATCTATTGGTTTTGAACTGCTAAGAAAAATGGGTTGG
AAAGAGGGACAAGGAATCGGTCCTCGAACAAAGAGAAAGCCACGCCGACAAAAACCTGATCCCG
GAGTAAAAATCTATGGCTGTGCATTACCCCCTGGAGGCTCTGAAGGATCAGAGGATGAAGATGA
CGACTACTTGCCCGAAAATGTGACCTTTGCCCCCAAAGACGTCACCCCTGTGGATTTCACACCG
AAGGACAATGTGCACGGGCTGGCGTACAAGGGCCTGGATCCACACCAAGCACTGTTTGGAACTT
CGGCTGAACATGTTAATCTTTTCAGTGGAGGAGCTGAGGGAGCCGGCAATCTTCTTGGAGAAGC
TGGACTAAATAAAGGGAGAAAGCTGGGAATTTCAGGCCAGGCTTTTGGCGTTGGTGCCCTAGAA
GAGGAAGATGATGATATTTATGCCACAGAAACGCTGTCCAGGTATGACACTGTCCTGAAGGACG
AGGAGCCTGGAGATGGCCTGTACGGCTGGACGGCACCCAGGCAGTATAGAAATCAGAAAGAATC
GGAGAAAGATCTTCGATATATTGGCAAAATTTTGGATGGATTTTCCCTGGCTTCTAAACCTTTA
TCATCTAAAAAAATTTATCCGCCCCCTGAGTTGCCAAGGGACTATCGACCAGTGCATTATTTCC
GACCCGTGGTCGCCGCCACCTCCGAGAACTCCCATTTGCTTCAGGTGTTATCCGAGTCAGCCGG
AAAGGCAGCGCACGAGCCAGCGACACACAGTAGGCACCAACTGAATGCCTCCAAGCGGGGGGAG
TTGCTAGGAGAGACGCCAGCCCAAGGTTCAGCAACTTCCGTGTTAGAGTTTCTGTCCCAAAAAG
ACAGAGAGAGGATCAAAGAAATGAAGCAGGCAACTGAGCTGAAAGCAGCGCAGCTCCAGGCCAG
GAGTCTGGCACAGAGGGCGGCAAGCAGCAGAGCTGGGCCCTCGTCACCGGACGTTGGACACAGC
TCTTGGCACGTGGCCCTGGGTGGCGCGACAGCCCCCGCCAGAGCCAGCAACTTCAGACCTTTTG
CTAAAGATCCAGAGAAGCAGAAACGATACGAAGAGTTCTTAGCGCATATGAAAAAGGGTCGGAA
AGATGCCCTGGAGCGCTGCCTGGACCCCAGCATGACCGAGTGGGAGCGCGGCCGCGAGCGGGAA
GAGTTCGCGCGGGCGGCGCAGCTGTACACGGCTTCCCACTCGACCCTGTCCTCCAGGTTCACGC
ACGCCAAGGAGGAGGACGACTCAGAGCAAGTAGAAGTTCCTCGAGACCAAGAGAACGATGTCAG
TGACAAGCAGTCCGCTGTGAAGATGAAGATGTTCGGGAAGTTGACCCGAGACGCATTTGAGTGG
CACCCTGACAAGCTTCTGTGTAAGAGGTTCAATGTCCCAGATCCCTATCCAGGTTCCACGTTAG
TTGGCTTACCAAGGGTGAAGCGTGACAAATACTCGGTCTTCAACTTTCTGACGCTCCCTGAGCC
CACCTCCTCGCCCGCAGCGCAAGCATCCAGTGAAAAAGCCCCGCAGCCCCGAGAGTCAAGGAAG
CCGTCCAGATGGGATGCATCTCAACATGAAAAAAAGGAAGATTCTATTAGTGAATTTTTAAGTT
TGGCTAGATCGAAAGTGGGTCCTACTAAACAAGAGCCTGGTCCCTCGGTGAACAAAGAGGAAGA
GCGTGCACCGGAATCCCTGTCAAATAAGCCGGCAGATGGAGGTGCGGACCTGCAGACTGAGGCA
GAAGGGAGCCGCCCGCCCATGGACCTGTTCAAGGCCATCTTCGCCGGCTCCTCGGAGTCCTCGT
CGGAGGAGGAAGAGGAAGAGGACAGCGAGGACGAGCAGGCGGGTCCGGCGGAGGCCGCCTTCGG
AGGCTCCCAGGACACGGCCGTGGGGGAGGCCGCATCTGTGGCCCGTGCTCCTGAGCCGGCGCCC
CCGGAGCCCGCCCCGGCGCCTCCCTTCCCGATCCAGAAGATGCGGCTGGAGGAGCGGGAAGAGT
TCGGCCCGCGGCTGCCGCCCGTCTTCTGCCCCAATGCTCGTCAGAAACCTGAGACTCCCCAAAA
AGAGAAATATAAAAAGAACAAAGAAAGACACAAGCTCAAGAAAGACCACAAACGAAAGAAGGAA
AAGAAAAAGAAACACAAGAAGCACAAACATAAAAGCAAACAAAAGACTAAAAAATCAGAGAAAA
GCAGCAGTTCGGAGAGCACCGACAGCCAAGACAGTCAGAGTGACGGAGGGGGGACCCCCGACCT
GTCCCCTCAGGAGCTGCTGCGACGGCTGAAATGTCTCCCGCTAAAGCGGCCATGACTGAATCCT
GCCCGGCCTGTCTCAGAGTCATATCCGCTCCGGGAAGGAAGCTCACCGATTGTTCAGTGAACAA
ACACATTGTACAGATTGTATTTATATGTAAATTGATGCTGTAAAATAATTTTTAAAACCTTGAC
ATTTGAAAGGTTGCAGAAATTGATTTCTATTTTTAATTTCAGTGAGTGTCAGAGGGAAAAGTTC
AGACGGAGCAGTTTAATAATTAAAGTGGCATTCTTTCCCG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005413891	(Get FASTA)	NCBI Sequence Viewer
	XP_013365031	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000004779
	ENSCLAP00000004779.1

RefSeq Acc Id:	XP_005413891 ⟸ XM_005413834
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UV92 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAALHGDSEEDLVSYGTGLEPLEEGERPKKPIPLQDQTVRDEKGRYKRFHGAFSGGFSAGYFNT VGSKEGWTPSTYVSSRQNRADRSVLGPEDFMDEEDLSEFGIAPKAIVTTDDFASKTKDKIQEKA RQLAAATAPIPGATLLDDFITPAKLSIGFELLRKMGWKEGQGIGPRTKRKPRRQKPDPGVKIYG CALPPGGSEGSEDEDDDYLPENVTFAPKDVTPVDFTPKDNVHGLAYKGLDPHQALFGTSAEHVN LFSGGAEGAGNLLGEAGLNKGRKLGISGQAFGVGALEEEDDDIYATETLSRYDTVLKDEEPGDG LYGWTAPRQYRNQKESEKDLRYIGKILDGFSLASKPLSSKKIYPPPELPRDYRPVHYFRPVVAA TSENSHLLQVLSESAGKAAHEPATHSRHQLNASKRGELLGETPAQGSATSVLEFLSQKDRERIK EMKQATELKAAQLQARSLAQRAASSRAGPSSPDVGHSSWHVALGGATAPARASNFRPFAKDPEK QKRYEEFLAHMKKGRKDALERCLDPSMTEWERGREREEFARAAQLYTASHSTLSSRFTHAKEED DSEQVEVPRDQENDVSDKQSAVKMKMFGKLTRDAFEWHPDKLLCKRFNVPDPYPGSTLVGLPRV KRDKYSVFNFLTLPEPTSSPAAQASSEKAPQPRESRKPSRWDASQHEKKEDSISEFLSLARSKV GPTKQEPGPSVNKEEERAPESLSNKPADGGADLQTEAEGSRPPMDLFKAIFAGSSESSSEEEEE EDSEDEQAGPAEAAFGGSQDTAVGEAASVARAPEPAPPEPAPAPPEPPEPTPAPPFPIQKMRLE EREEFGPRLPPVFCPNARQKPETPQKEKYKKNKERHKLKKDHKRKKEKKKKHKKHKHKSKQKTK KSEKSSSSESTDSQDSQSDGGGTPDLSPQELLRRLKCLPLKRP hide sequence

RefSeq Acc Id:	XP_013365031 ⟸ XM_013509577
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UV92 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAALHGDSEEDLVSYGTGLEPLEEGERPKKPIPLQDQTVRDEKGRYKRFHGAFSGGFSAGYFNT VGSKEGWTPSTYVSSRQNRADRSVLGPEDFMDEEDLSEFGIAPKAIVTTDDFASKTKDKIQEKA RQLAAATAPIPGATLLDDFITPAKLSIGFELLRKMGWKEGQGIGPRTKRKPRRQKPDPGVKIYG CALPPGGSEGSEDEDDDYLPENVTFAPKDVTPVDFTPKDNVHGLAYKGLDPHQALFGTSAEHVN LFSGGAEGAGNLLGEAGLNKGRKLGISGQAFGVGALEEEDDDIYATETLSRYDTVLKDEEPGDG LYGWTAPRQYRNQKESEKDLRYIGKILDGFSLASKPLSSKKIYPPPELPRDYRPVHYFRPVVAA TSENSHLLQVLSESAGKAAHEPATHSRHQLNASKRGELLGETPAQGSATSVLEFLSQKDRERIK EMKQATELKAAQLQARSLAQRAASSRAGPSSPDVGHSSWHVALGGATAPARASNFRPFAKDPEK QKRYEEFLAHMKKGRKDALERCLDPSMTEWERGREREEFARAAQLYTASHSTLSSRFTHAKEED DSEQVEVPRDQENDVSDKQSAVKMKMFGKLTRDAFEWHPDKLLCKRFNVPDPYPGSTLVGLPRV KRDKYSVFNFLTLPEPTSSPAAQASSEKAPQPRESRKPSRWDASQHEKKEDSISEFLSLARSKV GPTKQEPGPSVNKEEERAPESLSNKPADGGADLQTEAEGSRPPMDLFKAIFAGSSESSSEEEEE EDSEDEQAGPAEAAFGGSQDTAVGEAASVARAPEPAPPEPAPAPPFPIQKMRLEEREEFGPRLP PVFCPNARQKPETPQKEKYKKNKERHKLKKDHKRKKEKKKKHKKHKHKSKQKTKKSEKSSSSES TDSQDSQSDGGGTPDLSPQELLRRLKCLPLKRP hide sequence

Protein Domains

G-patch

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003395	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000004868	ENTREZGENE
	ENSCLAT00000004868.1	UniProtKB/TrEMBL
InterPro	DUF1604	UniProtKB/TrEMBL
	G_patch_dom	UniProtKB/TrEMBL
NCBI Gene	LOC102027361	ENTREZGENE
PANTHER	G PATCH DOMAIN-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
	G PATCH DOMAIN-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
Pfam	DUF1604	UniProtKB/TrEMBL
	G-patch	UniProtKB/TrEMBL
PROSITE	G_PATCH	UniProtKB/TrEMBL
UniProt	A0A8C2UV92	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-16	Gpatch1	G-patch domain containing 1		G patch domain containing 1	Symbol and/or name change	5135510	APPROVED
2015-08-25	Gpatch1	G patch domain containing 1	LOC102027361	G patch domain-containing protein 1-like	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar