LOC102004837 (dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase) - Rat Genome Database

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Gene: LOC102004837 (dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase) Chinchilla lanigera
Analyze
Symbol: LOC102004837
Name: dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
RGD ID: 8825322
Description: INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH long QT syndrome 2 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Alg10; ALG10, alpha-1,2-glucosyltransferase
RGD Orthologs
Human
Rat
Bonobo
Squirrel
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555051,844,005 - 1,854,229 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
LOC102004837
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555051,844,005 - 1,854,229 (-)NCBIChiLan1.0ChiLan1.0
ALG10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381234,022,377 - 34,028,302 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1234,022,468 - 34,029,694 (+)EnsemblGRCh38hg38GRCh38
GRCh371234,175,431 - 34,181,237 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361234,066,483 - 34,072,504 (+)NCBINCBI36Build 36hg18NCBI36
Build 341234,066,482 - 34,072,501NCBI
Celera1213,983,778 - 13,989,799 (+)NCBICelera
Cytogenetic Map12p11.1NCBI
HuRef1233,915,997 - 33,922,020 (+)NCBIHuRef
CHM1_11234,140,208 - 34,146,227 (+)NCBICHM1_1
T2T-CHM13v2.01233,899,971 - 33,905,896 (+)NCBIT2T-CHM13v2.0
Alg10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87123,214,636 - 123,225,104 (+)NCBIGRCr8
mRatBN7.27121,335,048 - 121,345,517 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7121,335,042 - 121,340,308 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7123,130,038 - 123,135,298 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07125,356,097 - 125,361,357 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07125,292,610 - 125,297,871 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07131,330,913 - 131,336,183 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7131,330,913 - 131,336,183 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07131,010,627 - 131,015,654 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47128,613,369 - 128,618,635 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17128,647,598 - 128,659,656 (+)NCBI
Celera7117,794,570 - 117,799,842 (+)NCBICelera
Cytogenetic Map7q35NCBI
LOC100971669
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21062,693,193 - 62,707,171 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11262,682,413 - 62,703,474 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01252,142,613 - 52,178,585 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11254,773,993 - 54,781,456 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1254,776,822 - 54,781,149 (-)Ensemblpanpan1.1panPan2
Alg10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494575,565,697 - 75,576,407 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366072,404,592 - 2,409,774 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC101710247
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247782,131,698 - 2,136,026 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247782,126,488 - 2,135,971 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005407110   ⟹   XP_005407167
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555051,844,005 - 1,854,229 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005407167 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000000555
  ENSCLAP00000000555.1
Reference Protein Sequences
RefSeq Acc Id: XP_005407167   ⟸   XM_005407110
- UniProtKB: A0A8C2UMA0 (UniProtKB/TrEMBL)
- Sequence:


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000000451 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000000586 ENTREZGENE
  ENSCLAT00000000586.1 UniProtKB/TrEMBL
InterPro Alg10 UniProtKB/TrEMBL
NCBI Gene Alg10 ENTREZGENE
PANTHER DOL-P-GLC:GLC(2)MAN(9)GLCNAC(2)-PP-DOL ALPHA-1,2-GLUCOSYLTRANSFERASE-RELATED UniProtKB/TrEMBL
  PTHR12989 UniProtKB/TrEMBL
Pfam DIE2_ALG10 UniProtKB/TrEMBL
PIRSF Alpha1_2_glucosyltferase_Alg10 UniProtKB/TrEMBL
UniProt A0A8C2UMA0 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-25 LOC102004837  dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase  Alg10  ALG10, alpha-1,2-glucosyltransferase  Symbol and/or name change 5135510 APPROVED