Ust (uronyl 2-sulfotransferase) - Rat Genome Database

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Gene: Ust (uronyl 2-sulfotransferase) Chinchilla lanigera
Analyze
Symbol: Ust
Name: uronyl 2-sulfotransferase
RGD ID: 8805844
Description: INVOLVED IN establishment of cell polarity (ortholog); regulation of axonogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); attention deficit hyperactivity disorder (ortholog); endometriosis (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uronyl-2-sulfotransferase
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543912,125,591 - 12,406,271 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543912,122,935 - 12,406,368 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Ust
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543912,125,591 - 12,406,271 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543912,122,935 - 12,406,368 (-)NCBIChiLan1.0ChiLan1.0
UST
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386148,747,030 - 149,076,990 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6148,747,030 - 149,076,990 (+)EnsemblGRCh38hg38GRCh38
GRCh376149,068,166 - 149,398,126 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366149,110,157 - 149,439,818 (+)NCBINCBI36Build 36hg18NCBI36
Build 346149,110,156 - 149,439,818NCBI
Celera6149,804,170 - 150,133,178 (+)NCBICelera
Cytogenetic Map6q25.1NCBI
HuRef6146,637,095 - 146,966,117 (+)NCBIHuRef
CHM1_16149,333,029 - 149,662,873 (+)NCBICHM1_1
T2T-CHM13v2.06149,946,826 - 150,276,839 (+)NCBIT2T-CHM13v2.0
Ust
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39108,068,499 - 8,394,701 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl108,080,520 - 8,394,589 (-)EnsemblGRCm39 Ensembl
GRCm38108,204,753 - 8,518,825 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl108,204,756 - 8,518,825 (-)EnsemblGRCm38mm10GRCm38
MGSCv37107,924,551 - 8,238,623 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36107,897,457 - 8,208,962 (-)NCBIMGSCv36mm8
Celera108,087,930 - 8,411,124 (-)NCBICelera
Cytogenetic Map10A1NCBI
cM Map102.65NCBI
Ust
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr814,487,316 - 4,782,579 (-)NCBIGRCr8
mRatBN7.212,666,983 - 2,962,276 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl12,669,592 - 2,962,044 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx12,325,889 - 2,623,315 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.018,326,290 - 8,623,726 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.012,608,001 - 2,905,423 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.012,330,631 - 2,627,654 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl12,333,778 - 2,627,747 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.014,022,062 - 4,313,796 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.412,868,196 - 3,158,231 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.112,868,195 - 3,158,231 (-)NCBI
Celera11,217,279 - 1,507,424 (-)NCBICelera
Cytogenetic Map1p13NCBI
UST
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25168,769,032 - 169,101,939 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16166,662,491 - 166,995,609 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06146,562,541 - 146,895,450 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16151,270,358 - 151,600,651 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6151,270,505 - 151,597,779 (+)Ensemblpanpan1.1panPan2
UST
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1139,633,276 - 39,922,361 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl139,633,501 - 39,921,289 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha140,532,475 - 40,759,827 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0139,810,126 - 40,102,153 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl139,810,043 - 40,102,150 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1139,687,116 - 39,978,672 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0139,553,715 - 39,843,184 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0139,893,472 - 40,184,349 (+)NCBIUU_Cfam_GSD_1.0
Ust
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946134,614,740 - 134,881,624 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364891,867,249 - 2,134,874 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364891,866,792 - 2,133,558 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UST
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl116,840,533 - 17,138,392 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1116,840,422 - 17,138,088 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2119,294,997 - 19,463,194 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UST
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11322,595,088 - 22,934,184 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666040198,605,207 - 198,921,153 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ust
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247859,064,270 - 9,388,407 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247859,061,753 - 9,388,794 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000004372   ⟹   ENSCLAP00000004290
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495543912,125,591 - 12,406,271 (-)Ensembl
RefSeq Acc Id: XM_005390617   ⟹   XP_005390674
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495543912,122,935 - 12,406,368 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005390674 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000004290
  ENSCLAP00000004290.1
Reference Protein Sequences
RefSeq Acc Id: XP_005390674   ⟸   XM_005390617
- UniProtKB: A0A8C2UVF6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000004290   ⟸   ENSCLAT00000004372


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000003051 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000004372 ENTREZGENE
  ENSCLAT00000004372.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
InterPro Heparan_SO4_2-O-STrfase UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  Sulfotransferase UniProtKB/TrEMBL
NCBI Gene Ust ENTREZGENE
PANTHER PTHR12129 UniProtKB/TrEMBL
  URONYL 2-SULFOTRANSFERASE UniProtKB/TrEMBL
Pfam Sulfotransfer_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A8C2UVF6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Ust  uronyl 2-sulfotransferase    uronyl-2-sulfotransferase  Symbol and/or name change 5135510 APPROVED