Nmu (neuromedin U) - Rat Genome Database

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Gene: Nmu (neuromedin U) Chinchilla lanigera
Analyze
Symbol: Nmu
Name: neuromedin U
RGD ID: 8797369
Description: ENCODES a protein that exhibits neuromedin U receptor binding (ortholog); type 1 neuromedin U receptor binding (ortholog); type 2 neuromedin U receptor binding (ortholog); INVOLVED IN eating behavior (ortholog); energy homeostasis (ortholog); gastric acid secretion (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIk (ortholog); genetic disease (ortholog); obesity (ortholog); FOUND IN terminal bouton (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: neuromedin-U
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544715,328,973 - 15,357,830 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544715,324,702 - 15,361,726 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Nmu
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544715,328,973 - 15,357,830 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544715,324,702 - 15,361,726 (+)NCBIChiLan1.0ChiLan1.0
NMU
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38455,595,231 - 55,636,793 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl455,595,229 - 55,636,698 (-)EnsemblGRCh38hg38GRCh38
GRCh37456,461,398 - 56,502,960 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36456,156,155 - 56,197,222 (-)NCBINCBI36Build 36hg18NCBI36
Build 34456,302,325 - 56,343,393NCBI
Celera453,963,435 - 54,004,491 (-)NCBICelera
Cytogenetic Map4q12NCBI
HuRef452,410,707 - 52,451,808 (-)NCBIHuRef
CHM1_1456,496,442 - 56,537,601 (-)NCBICHM1_1
T2T-CHM13v2.0459,083,363 - 59,124,965 (-)NCBIT2T-CHM13v2.0
Nmu
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39576,481,342 - 76,511,624 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl576,481,342 - 76,511,635 (-)EnsemblGRCm39 Ensembl
GRCm38576,333,495 - 76,363,777 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl576,333,495 - 76,363,788 (-)EnsemblGRCm38mm10GRCm38
MGSCv37576,762,520 - 76,792,802 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36577,408,270 - 77,438,552 (-)NCBIMGSCv36mm8
Celera573,598,831 - 73,629,109 (-)NCBICelera
Cytogenetic Map5C3.3NCBI
cM Map540.93NCBI
Nmu
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81432,198,789 - 32,226,397 (+)NCBIGRCr8
mRatBN7.21431,844,564 - 31,872,196 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1431,844,728 - 31,872,192 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1432,211,304 - 32,238,600 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01433,519,191 - 33,546,489 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01432,004,310 - 32,031,606 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01434,353,683 - 34,381,968 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1434,354,503 - 34,381,828 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01434,140,106 - 34,167,815 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41434,115,472 - 34,143,662 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11434,115,471 - 34,143,789 (+)NCBI
Celera1431,146,133 - 31,173,459 (+)NCBICelera
Cytogenetic Map14p11NCBI
NMU
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2374,159,402 - 74,197,197 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1474,361,439 - 74,399,202 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0468,299,538 - 68,340,680 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1474,866,939 - 74,904,965 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl474,867,364 - 74,904,965 (+)Ensemblpanpan1.1panPan2
LOC611347
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11347,865,037 - 48,047,697 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1347,865,002 - 47,893,921 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1347,921,143 - 47,933,366 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01348,643,518 - 48,662,228 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11348,318,020 - 48,336,672 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01347,846,906 - 47,863,786 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01348,791,482 - 48,810,183 (-)NCBIUU_Cfam_GSD_1.0
Nmu
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528528,335,709 - 28,363,577 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648217,936,467 - 17,961,711 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
NMU
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl854,952,339 - 54,978,551 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1854,952,333 - 54,978,577 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2858,574,370 - 58,601,523 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NMU
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1712,931,176 - 12,967,294 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl712,932,226 - 12,962,741 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606613,688,566 - 13,723,899 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nmu
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476113,824,144 - 13,848,219 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476113,823,752 - 13,850,756 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000005327   ⟹   ENSCLAP00000005231
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_00495544715,328,973 - 15,357,830 (+)Ensembl
RefSeq Acc Id: XM_005392882   ⟹   XP_005392939
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_00495544715,324,702 - 15,361,726 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005392939 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000005231.1
Reference Protein Sequences
RefSeq Acc Id: XP_005392939   ⟸   XM_005392882
- Sequence:
RefSeq Acc Id: ENSCLAP00000005231   ⟸   ENSCLAT00000005327
Protein Domains
Neuromedin U C-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000003714 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000005327.1 UniProtKB/TrEMBL
InterPro Neuromedin-U_amidation-site UniProtKB/TrEMBL
  NMU UniProtKB/TrEMBL
  NMU_C UniProtKB/TrEMBL
NCBI Gene Nmu ENTREZGENE
PANTHER NEUROMEDIN-U UniProtKB/TrEMBL
  PTHR15390 UniProtKB/TrEMBL
Pfam NMU UniProtKB/TrEMBL
PROSITE NMU UniProtKB/TrEMBL
UniProt A0A8C2YKG5_CHILA UniProtKB/TrEMBL