Exoc3 (exocyst complex component 3)

Gene: Exoc3 (exocyst complex component 3) Chinchilla lanigera

Analyze

Symbol:

Exoc3

Name:

exocyst complex component 3

RGD ID:

8769880

Description:

PARTICIPATES IN E-cadherin signaling pathway; insulin signaling pathway; ASSOCIATED WITH dopamine transporter deficiency syndrome (ortholog); interstitial lung disease 2 (ortholog); FOUND IN presynaptic membrane (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955504	196,695 - 223,812 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955504	195,743 - 223,812 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

dopamine transporter deficiency syndrome (ISO)

interstitial lung disease 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

presynaptic membrane (ISO)

Molecular Function

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

E-cadherin signaling pathway (ISO)

insulin signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Exoc3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955504	196,695 - 223,812 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955504	195,743 - 223,812 (+)	NCBI	ChiLan1.0	ChiLan1.0

EXOC3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	443,176 - 467,290 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	443,175 - 471,937 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	5	443,291 - 467,405 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	496,334 - 520,411 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	5	496,374 - 520,407	NCBI
Celera	5	541,456 - 565,545 (+)	NCBI		Celera
Cytogenetic Map	5	p15.33	NCBI
HuRef	5	431,407 - 455,422 (+)	NCBI		HuRef
CHM1_1	5	443,164 - 467,222 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	5	438,418 - 462,555 (+)	NCBI		T2T-CHM13v2.0

Exoc3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	13	74,317,921 - 74,358,151 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	13	74,317,607 - 74,356,851 (-)	Ensembl		GRCm39 Ensembl
GRCm38	13	74,169,802 - 74,210,032 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	13	74,169,488 - 74,208,732 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	13	74,307,253 - 74,346,148 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	13	74,635,807 - 74,674,702 (-)	NCBI		MGSCv36	mm8
Celera	13	76,499,394 - 76,538,276 (-)	NCBI		Celera
Cytogenetic Map	13	C1	NCBI
cM Map	13	40.15	NCBI

Exoc3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	30,919,871 - 30,950,624 (+)	NCBI		GRCr8
mRatBN7.2	1	29,091,298 - 29,122,056 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	29,091,294 - 29,122,045 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	28,893,113 - 28,923,914 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	34,892,975 - 34,923,773 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	29,093,734 - 29,124,536 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	31,700,953 - 31,731,726 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	31,700,953 - 31,731,815 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	33,126,575 - 33,159,109 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	29,897,536 - 29,928,281 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	29,902,027 - 29,931,141 (+)	NCBI
Celera	1	27,743,063 - 27,773,955 (+)	NCBI		Celera
Cytogenetic Map	1	p11	NCBI

EXOC3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	662,394 - 690,011 (+)	NCBI		NHGRI_mPanPan1-v2
PanPan1.1 Ensembl	5	568,471 - 596,723 (+)	Ensembl	panpan1.1		panPan2

EXOC3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	11,790,927 - 11,811,566 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	11,791,926 - 11,811,561 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	16,304,626 - 16,325,902 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	11,695,749 - 11,716,848 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	11,694,759 - 11,716,578 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	11,746,203 - 11,767,708 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	11,727,053 - 11,748,335 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	11,937,421 - 11,958,497 (-)	NCBI		UU_Cfam_GSD_1.0

Exoc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	244,844,352 - 244,861,748 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936815	1,005,560 - 1,023,070 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936815	1,005,637 - 1,022,916 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EXOC3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	16	79,705,750 - 79,730,047 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	16	79,705,743 - 79,730,272 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

EXOC3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	4	320,067 - 359,647 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	4	337,658 - 360,149 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666064	27,462,671 - 27,487,604 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Exoc3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624751	215,821 - 255,104 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624751	215,762 - 254,200 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005406996	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005406997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005406998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013505897	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01064816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01047252	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000005496 ⟹ ENSCLAP00000005400

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955504	196,695 - 223,812 (+)	Ensembl

RefSeq Acc Id:

XM_005406996 ⟹ XP_005407053

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955504	195,759 - 223,812 (+)	NCBI

Sequence:

show sequence

CAGCGCCTACTTCCGGTCGGGACCTGTGTGGCGGCGGTGGCGCGGACGGTGAGGCGGGTCCTCG
TTGACGGCCTTTAGTCTCCCGGGGAGCTCGCCAGCCTTTTCTGTTCCCTTCCCGGGCGCCCTCG
AGGCTGCCTGGGGTATGACACGTGGGCAGATCCCACCTGTTCATTGGCCATGAAGGAGACAGAC
CGGGAGGCGGTGGCAACAGCAGTTCAGAGGGTTGCTGGGATGCTCCAGCGCCCAGATCAGCTAG
ATAAGGTGGAGCAGTATCGCCGAAGGGAAGCTCGGAAGAAGGCCTCTGTGGAGGCCAGACTGAA
GGCTGCAATCCAGTCACAGCTGGATGGGGTACGTACAGGCCTAAGCCAGCTCCACAATGCGCTT
AATGATGTCAAGGACATCCAGCAGTCACTGGCTGACGTCAGCAAGGACTGGAGGCAGAGCATCA
ACACCATCGAGAGCCTCAAGGATGTGAAGGATGCAGTGGTGCAGCACAGCCAGCTGGCTGCGGC
TGTGGAGAACCTCAAGAACATCTTCTCAGTGCCTGAGATTGTAAGGGAGACCCAGGACCTGATC
GAGCAAGGGGCTCTGCTGCAAGCTCACCGGAAGCTGATGGACCTGGAGTGCTCACGGGATGGAC
TGATGTGTGAGCAGTACCGCATGGACAGTGGGAACACACGGGACATGACCCTCATCCACGGCTA
CTTCGGCAGCACGCAGGGGCTCTCTGATGAGCTGGCAAAGCAACTGTGGATGGTGCTGCAGAGG
TCCCTGGTCACTGTCCGTAGAGATCCCACCTTGCTGGTCTCTGTGGTCAGGATCATTGAAAGGG
AGGAAAAAATTGACAAGCGTATACTTGACCGAAAAAAGCAAACTGGCTTTGTTCCTCCTGGGAG
GCCCAAAAATTGGAAAGAGAAAATGTTTGCCATCTTGGACAGAACCGTGACAACTCGAATCGAG
GGCACACAGGCAGATACCAGGGAGTCTGATAAGATGTGGCTTGTACGCCACCTGGAAATCATAA
GGAAGTATGTCCTGGATGACCTCATCATTGCCAAAAACCTGATGGTTCAGTGCTTCCCTCCACA
TTATGAGATCTTTAAAAACCTCCTGAGCATGTACCACCAGGCCCTGAGCACAAGAATGCAGGAC
CTAGCATCAGAAGACCTGGAGGCCAACGAGATCGTGAGCCTGCTTACATGGGTCTTGAACACCT
ACACAAGTATGGAGATGATGGGGAACATGGAACTGGCCCCAGAAGTAGATGTCAATGCCTTGGA
GCCTCTGCTTTCTTCAAGTGTGGTCTCTGAGCTGCTCGACACATACATGTCCACGCTCACTTCC
AACATCATTGCCTGGTTGCGGAAAGCACTGGAAACAGACAAGAAAGACTGGAGCAAAGAAACAG
AACCTGAAGCCGACCAGGATGGGTACTACCAGACAACGCTGCCTGCCATTGTCTTCCAGATGTT
TGAGCAGAATCTGCAAGTTGCTTCTCAGATAAGTGAAGATTTGAAAACAAAGGTATTGGTTTTG
TGTCTTCAGCAAATGAATTCTTTTCTAAGTAGGTACAGAGACGAGGCCCAGCTGTACAAAGAGG
AGCACCTGCGGAACCGGCAGCACCCGCACTGTTATGTGCAGTACATGATTGCCATCATCAACAA
CTGCCAGACCTTTAAGATGTTTCCTTGCAGAGAATCAATCGTCAGTTTGAAGAAGAAGTACTTA
AAAAATGAAGCAGAGGAGGGCGTGTGTCTGAGCCAGCCAAGTATGGATGGGATTCTGGATGCCA
TTGCCAAGGAAGGCTGCAGTAGCCTGCTAGAGGAGGTCTTCTTGGACCTGGAGCAACATCTGAA
TGAACTGATGACAAAGAAGTGGCTGGTAGGGTCAAATGCTGTGGATACCATCTGTGTCACCGTG
GAAGACTATTTCAATGATTTTGCCAAAATTAAAAGGCCATATAAAAAGAGGATGACAGCCGAGG
CACACCGGCGTGTGGTAGTGGAGTACCTGCGGGCTATCATGCAAAAGCGCATCTCTTTCCGGAG
CCCTGAGGAGCGCAAGGAGGGTGCTGAGAAGATGGTCCGGGAGGCTGAGCAGCTGTGCTTCCTG
TTCCGGAAGCTAGCATCTGGGTTTGGTGAAGAGGTGGATGGTTACTGTGACACCATTGTTGCCG
TGGCAGAAGTTATTAAGCTAACAGACCCTTCCCTGCTCTACCTTGAGGTCTCAACTCTGGTCAG
CAAATATCCAGACATCAGGGATGACCACATCGGTGCGCTGCTGGCCATGCGTGGGGATGCCAGC
CGGGACATGAAGCAGACCATCATAGAGTCACTAGAGCAGGGCCCTACGCAGGCAAACCCCAACT
ACGTGCCCCTCTTCAGGGAGATTGTTGTGCCCAGTCTGAATGTGGCAAAGCTCCTCAAGTAGCC
GGCCGTTTGCTTGTGTATGTCCCTCTGAGGCAGAAGCATATTAAAGCAAATGTCCCTCTCCAGG
GCCACCATTGGTGGTCTCAGCAACAACATGCCTATCCTTAGATGTGCTCAAGTATGTGTGGGTG
AGGGCTGTGGGGTGGCTTCTGGGTGCCTGGTTCTGTGGGTTTTTCCACCCTGATGTAAATGTGC
TTTGTGAGGACGTCTTTGTATGAAGCCTCTCAGTCACTTGTCATGGGAAATGTGTGTGGGTGTC
CCTTACTCCCCCATCACGGGCCTCTCTGTCCAGCATGCACACTCAGGACCTCTGCCACCTGATT
AAAAGAAGTGAAAGCCAA

hide sequence

RefSeq Acc Id:

XM_005406997 ⟹ XP_005407054

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955504	195,743 - 223,812 (+)	NCBI

Sequence:

show sequence

AAACGGAAGTGTCGGTCAGCGCCTACTTCCGGTCGGGACCTGTGTGGCGGCGGTGGCGCGGACG
GCTGCCTGGGGTATGACACGTGGGCAGATCCCACCTGTTCATTGGCCATGAAGGAGACAGACCG
GGAGGCGGTGGCAACAGCAGTTCAGAGGGTTGCTGGGATGCTCCAGCGCCCAGATCAGCTAGAT
AAGGTGGAGCAGTATCGCCGAAGGGAAGCTCGGAAGAAGGCCTCTGTGGAGGCCAGACTGAAGG
CTGCAATCCAGTCACAGCTGGATGGGGTACGTACAGGCCTAAGCCAGCTCCACAATGCGCTTAA
TGATGTCAAGGACATCCAGCAGTCACTGGCTGACGTCAGCAAGGACTGGAGGCAGAGCATCAAC
ACCATCGAGAGCCTCAAGGATGTGAAGGATGCAGTGGTGCAGCACAGCCAGCTGGCTGCGGCTG
TGGAGAACCTCAAGAACATCTTCTCAGTGCCTGAGATTGTAAGGGAGACCCAGGACCTGATCGA
GCAAGGGGCTCTGCTGCAAGCTCACCGGAAGCTGATGGACCTGGAGTGCTCACGGGATGGACTG
ATGTGTGAGCAGTACCGCATGGACAGTGGGAACACACGGGACATGACCCTCATCCACGGCTACT
TCGGCAGCACGCAGGGGCTCTCTGATGAGCTGGCAAAGCAACTGTGGATGGTGCTGCAGAGGTC
CCTGGTCACTGTCCGTAGAGATCCCACCTTGCTGGTCTCTGTGGTCAGGATCATTGAAAGGGAG
GAAAAAATTGACAAGCGTATACTTGACCGAAAAAAGCAAACTGGCTTTGTTCCTCCTGGGAGGC
CCAAAAATTGGAAAGAGAAAATGTTTGCCATCTTGGACAGAACCGTGACAACTCGAATCGAGGG
CACACAGGCAGATACCAGGGAGTCTGATAAGATGTGGCTTGTACGCCACCTGGAAATCATAAGG
AAGTATGTCCTGGATGACCTCATCATTGCCAAAAACCTGATGGTTCAGTGCTTCCCTCCACATT
ATGAGATCTTTAAAAACCTCCTGAGCATGTACCACCAGGCCCTGAGCACAAGAATGCAGGACCT
AGCATCAGAAGACCTGGAGGCCAACGAGATCGTGAGCCTGCTTACATGGGTCTTGAACACCTAC
ACAAGTATGGAGATGATGGGGAACATGGAACTGGCCCCAGAAGTAGATGTCAATGCCTTGGAGC
CTCTGCTTTCTTCAAGTGTGGTCTCTGAGCTGCTCGACACATACATGTCCACGCTCACTTCCAA
CATCATTGCCTGGTTGCGGAAAGCACTGGAAACAGACAAGAAAGACTGGAGCAAAGAAACAGAA
CCTGAAGCCGACCAGGATGGGTACTACCAGACAACGCTGCCTGCCATTGTCTTCCAGATGTTTG
AGCAGAATCTGCAAGTTGCTTCTCAGATAAGTGAAGATTTGAAAACAAAGGTATTGGTTTTGTG
TCTTCAGCAAATGAATTCTTTTCTAAGTAGGTACAGAGACGAGGCCCAGCTGTACAAAGAGGAG
CACCTGCGGAACCGGCAGCACCCGCACTGTTATGTGCAGTACATGATTGCCATCATCAACAACT
GCCAGACCTTTAAGATGTTTCCTTGCAGAGAATCAATCGTCAGTTTGAAGAAGAAGTACTTAAA
AAATGAAGCAGAGGAGGGCGTGTGTCTGAGCCAGCCAAGTATGGATGGGATTCTGGATGCCATT
GCCAAGGAAGGCTGCAGTAGCCTGCTAGAGGAGGTCTTCTTGGACCTGGAGCAACATCTGAATG
AACTGATGACAAAGAAGTGGCTGGTAGGGTCAAATGCTGTGGATACCATCTGTGTCACCGTGGA
AGACTATTTCAATGATTTTGCCAAAATTAAAAGGCCATATAAAAAGAGGATGACAGCCGAGGCA
CACCGGCGTGTGGTAGTGGAGTACCTGCGGGCTATCATGCAAAAGCGCATCTCTTTCCGGAGCC
CTGAGGAGCGCAAGGAGGGTGCTGAGAAGATGGTCCGGGAGGCTGAGCAGCTGTGCTTCCTGTT
CCGGAAGCTAGCATCTGGGTTTGGTGAAGAGGTGGATGGTTACTGTGACACCATTGTTGCCGTG
GCAGAAGTTATTAAGCTAACAGACCCTTCCCTGCTCTACCTTGAGGTCTCAACTCTGGTCAGCA
AATATCCAGACATCAGGGATGACCACATCGGTGCGCTGCTGGCCATGCGTGGGGATGCCAGCCG
GGACATGAAGCAGACCATCATAGAGTCACTAGAGCAGGGCCCTACGCAGGCAAACCCCAACTAC
GTGCCCCTCTTCAGGGAGATTGTTGTGCCCAGTCTGAATGTGGCAAAGCTCCTCAAGTAGCCGG
CCGTTTGCTTGTGTATGTCCCTCTGAGGCAGAAGCATATTAAAGCAAATGTCCCTCTCCAGGGC
CACCATTGGTGGTCTCAGCAACAACATGCCTATCCTTAGATGTGCTCAAGTATGTGTGGGTGAG
GGCTGTGGGGTGGCTTCTGGGTGCCTGGTTCTGTGGGTTTTTCCACCCTGATGTAAATGTGCTT
TGTGAGGACGTCTTTGTATGAAGCCTCTCAGTCACTTGTCATGGGAAATGTGTGTGGGTGTCCC
TTACTCCCCCATCACGGGCCTCTCTGTCCAGCATGCACACTCAGGACCTCTGCCACCTGATTAA
AAGAAGTGAAAGCCAA

hide sequence

RefSeq Acc Id:

XM_005406998 ⟹ XP_005407055

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955504	195,759 - 223,812 (+)	NCBI

Sequence:

show sequence

CAGCGCCTACTTCCGGTCGGGACCTGTGTGGCGGCGGTGGCGCGGACGGTGAGGCGGGTCCTCG
TTGACGGCCTTTAGTCTCCCGGGGAGCTCGCCAGCCTTTTCTGTTCCCTTCCCGGGCGCCCTCG
AGATATTCTGCACTGGTATACCTGGTTTCATAATCTGAAAAAAATAGAAGAAATAGTGGTTACA
ATATTATTCATTTGAAAGAGAAGTGAGAAGAGATGCAGTGTGTACAGACAGAGAGGAATTGTTT
ACTGGAAACTCACCATGGATTTCAGTGTTTTTCTGAAAACTTGTGGGAATGGGGAGTGAAAAGT
TCTAAAAGGCTGCCTGGGGTATGACACGTGGGCAGATCCCACCTGTTCATTGGCCATGAAGGAG
ACAGACCGGGAGGCGGTGGCAACAGCAGTTCAGAGGGTTGCTGGGATGCTCCAGCGCCCAGATC
AGCTAGATAAGGTGGAGCAGTATCGCCGAAGGGAAGCTCGGAAGAAGGCCTCTGTGGAGGCCAG
ACTGAAGGCTGCAATCCAGTCACAGCTGGATGGGGTACGTACAGGCCTAAGCCAGCTCCACAAT
GCGCTTAATGATGTCAAGGACATCCAGCAGTCACTGGCTGACGTCAGCAAGGACTGGAGGCAGA
GCATCAACACCATCGAGAGCCTCAAGGATGTGAAGGATGCAGTGGTGCAGCACAGCCAGCTGGC
TGCGGCTGTGGAGAACCTCAAGAACATCTTCTCAGTGCCTGAGATTGTAAGGGAGACCCAGGAC
CTGATCGAGCAAGGGGCTCTGCTGCAAGCTCACCGGAAGCTGATGGACCTGGAGTGCTCACGGG
ATGGACTGATGTGTGAGCAGTACCGCATGGACAGTGGGAACACACGGGACATGACCCTCATCCA
CGGCTACTTCGGCAGCACGCAGGGGCTCTCTGATGAGCTGGCAAAGCAACTGTGGATGGTGCTG
CAGAGGTCCCTGGTCACTGTCCGTAGAGATCCCACCTTGCTGGTCTCTGTGGTCAGGATCATTG
AAAGGGAGGAAAAAATTGACAAGCGTATACTTGACCGAAAAAAGCAAACTGGCTTTGTTCCTCC
TGGGAGGCCCAAAAATTGGAAAGAGAAAATGTTTGCCATCTTGGACAGAACCGTGACAACTCGA
ATCGAGGGCACACAGGCAGATACCAGGGAGTCTGATAAGATGTGGCTTGTACGCCACCTGGAAA
TCATAAGGAAGTATGTCCTGGATGACCTCATCATTGCCAAAAACCTGATGGTTCAGTGCTTCCC
TCCACATTATGAGATCTTTAAAAACCTCCTGAGCATGTACCACCAGGCCCTGAGCACAAGAATG
CAGGACCTAGCATCAGAAGACCTGGAGGCCAACGAGATCGTGAGCCTGCTTACATGGGTCTTGA
ACACCTACACAAGTATGGAGATGATGGGGAACATGGAACTGGCCCCAGAAGTAGATGTCAATGC
CTTGGAGCCTCTGCTTTCTTCAAGTGTGGTCTCTGAGCTGCTCGACACATACATGTCCACGCTC
ACTTCCAACATCATTGCCTGGTTGCGGAAAGCACTGGAAACAGACAAGAAAGACTGGAGCAAAG
AAACAGAACCTGAAGCCGACCAGGATGGGTACTACCAGACAACGCTGCCTGCCATTGTCTTCCA
GATGTTTGAGCAGAATCTGCAAGTTGCTTCTCAGATAAGTGAAGATTTGAAAACAAAGGTATTG
GTTTTGTGTCTTCAGCAAATGAATTCTTTTCTAAGTAGGTACAGAGACGAGGCCCAGCTGTACA
AAGAGGAGCACCTGCGGAACCGGCAGCACCCGCACTGTTATGTGCAGTACATGATTGCCATCAT
CAACAACTGCCAGACCTTTAAGATGTTTCCTTGCAGAGAATCAATCGTCAGTTTGAAGAAGAAG
TACTTAAAAAATGAAGCAGAGGAGGGCGTGTGTCTGAGCCAGCCAAGTATGGATGGGATTCTGG
ATGCCATTGCCAAGGAAGGCTGCAGTAGCCTGCTAGAGGAGGTCTTCTTGGACCTGGAGCAACA
TCTGAATGAACTGATGACAAAGAAGTGGCTGGTAGGGTCAAATGCTGTGGATACCATCTGTGTC
ACCGTGGAAGACTATTTCAATGATTTTGCCAAAATTAAAAGGCCATATAAAAAGAGGATGACAG
CCGAGGCACACCGGCGTGTGGTAGTGGAGTACCTGCGGGCTATCATGCAAAAGCGCATCTCTTT
CCGGAGCCCTGAGGAGCGCAAGGAGGGTGCTGAGAAGATGGTCCGGGAGGCTGAGCAGCTGTGC
TTCCTGTTCCGGAAGCTAGCATCTGGGTTTGGTGAAGAGGTGGATGGTTACTGTGACACCATTG
TTGCCGTGGCAGAAGTTATTAAGCTAACAGACCCTTCCCTGCTCTACCTTGAGGTCTCAACTCT
GGTCAGCAAATATCCAGACATCAGGGATGACCACATCGGTGCGCTGCTGGCCATGCGTGGGGAT
GCCAGCCGGGACATGAAGCAGACCATCATAGAGTCACTAGAGCAGGGCCCTACGCAGGCAAACC
CCAACTACGTGCCCCTCTTCAGGGAGATTGTTGTGCCCAGTCTGAATGTGGCAAAGCTCCTCAA
GTAGCCGGCCGTTTGCTTGTGTATGTCCCTCTGAGGCAGAAGCATATTAAAGCAAATGTCCCTC
TCCAGGGCCACCATTGGTGGTCTCAGCAACAACATGCCTATCCTTAGATGTGCTCAAGTATGTG
TGGGTGAGGGCTGTGGGGTGGCTTCTGGGTGCCTGGTTCTGTGGGTTTTTCCACCCTGATGTAA
ATGTGCTTTGTGAGGACGTCTTTGTATGAAGCCTCTCAGTCACTTGTCATGGGAAATGTGTGTG
GGTGTCCCTTACTCCCCCATCACGGGCCTCTCTGTCCAGCATGCACACTCAGGACCTCTGCCAC
CTGATTAAAAGAAGTGAAAGCCAA

hide sequence

RefSeq Acc Id:

XM_013505897 ⟹ XP_013361351

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955504	195,744 - 223,812 (+)	NCBI

Sequence:

show sequence

AACGGAAGTGTCGGTCAGCGCCTACTTCCGGTCGGGACCTGTGTGGCGGCGGTGGCGCGGACGG
CTGCCTGGGGTATGACACGTGGGCAGATCCCACCTGTTCATTGGCCATGAAGGAGACAGACCGG
GAGGCGGTGGCAACAGCAGTTCAGAGGGTTGCTGGGATGCTCCAGCGCCCAGATCAGCTAGATA
AGGTGGAGCAGTATCGCCGAAGGGAAGCTCGGAAGAAGGCCTCTGTGGAGGCCAGACTGAAGGC
TGCAATCCAGTCACAGCTGGATGGGGTACGTACAGGCCTAAGCCAGCTCCACAATGCGCTTAAT
GATGTCAAGGACATCCAGCAGTCACTGGCTGACGTCAGCAAGGACTGGAGGCAGAGCATCAACA
CCATCGAGAGCCTCAAGGATGTGAAGGATGCAGTGGTGCAGCACAGCCAGCTGGCTGCGGCTGT
GGAGAACCTCAAGAACATCTTCTCAGTGCCTGAGATTGTAAGGGAGACCCAGGACCTGATCGAG
CAAGGGGCTCTGCTGCAAGCTCACCGGAAGCTGATGGACCTGGAGTGCTCACGGGATGGACTGA
TGTGTGAGCAGTACCGCATGGACAGTGGGAACACACGGGACATGACCCTCATCCACGGCTACTT
CGGCAGCACGCAGGGGCTCTCTGATGAGCTGGCAAAGCAACTGTGGATGGTGCTGCAGAGGTCC
CTGGTCACTGTCCGTAGAGATCCCACCTTGCTGGTCTCTGTGGTCAGGATCATTGAAAGGGAGG
AAAAAATTGACAAGCGTATACTTGACCGAAAAAAGCAAACTGGCTTTGTTCCTCCTGGGAGGCC
CAAAAATTGGAAAGAGAAAATGTTTGCCATCTTGGACAGAACCGTGACAACTCGAATCGAGGGC
ACACAGGCAGATACCAGGGAGTCTGATAAGATGTGGCTTGTACGCCACCTGGAAATCATAAGGA
AGTATGTCCTGGATGACCTCATCATTGCCAAAAACCTGATGGTTCAGTGCTTCCCTCCACATTA
TGAGATCTTTAAAAACCTCCTGAGCATGTACCACCAGGCCCTGAGCACAAGAATGCAGGACCTA
GCATCAGAAGACCTGGAGGCCAACGAGATCGTGAGCCTGCTTACATGGGTCTTGAACACCTACA
CAAGTATGGAGATGATGGGGAACATGGAACTGGCCCCAGAAGTAGATGTCAATGCCTTGGAGCC
TCTGCTTTCTTCAAGTGTGGTCTCTGAGCTGCTCGACACATACATGTCCACGCTCACTTCCAAC
ATCATTGCCTGGTTGCGGAAAGCACTGGAAACAGACAAGAAAGACTGGAGCAAAGAAACAGAAC
CTGAAGCCGACCAGGATGGGTACTACCAGACAACGCTGCCTGCCATTGTCTTCCAGATGTTTGA
GCAGAATCTGCAAGTTGCTTCTCAGATAAGTGAAGATTTGAAAACAAAGGTATTGGTTTTGTGT
CTTCAGCAAATGAATTCTTTTCTAAGTAGGTACAGAGACGAGGCCCAGCTGTACAAAGAGGAGC
ACCTGCGGAACCGGCAGCACCCGCACTGTTATGTGCAGTACATGATTGCCATCATCAACAACTG
CCAGACCTTTAAAGAATCAATCGTCAGTTTGAAGAAGAAGTACTTAAAAAATGAAGCAGAGGAG
GGCGTGTGTCTGAGCCAGCCAAGTATGGATGGGATTCTGGATGCCATTGCCAAGGAAGGCTGCA
GTAGCCTGCTAGAGGAGGTCTTCTTGGACCTGGAGCAACATCTGAATGAACTGATGACAAAGAA
GTGGCTGGTAGGGTCAAATGCTGTGGATACCATCTGTGTCACCGTGGAAGACTATTTCAATGAT
TTTGCCAAAATTAAAAGGCCATATAAAAAGAGGATGACAGCCGAGGCACACCGGCGTGTGGTAG
TGGAGTACCTGCGGGCTATCATGCAAAAGCGCATCTCTTTCCGGAGCCCTGAGGAGCGCAAGGA
GGGTGCTGAGAAGATGGTCCGGGAGGCTGAGCAGCTGTGCTTCCTGTTCCGGAAGCTAGCATCT
GGGTTTGGTGAAGAGGTGGATGGTTACTGTGACACCATTGTTGCCGTGGCAGAAGTTATTAAGC
TAACAGACCCTTCCCTGCTCTACCTTGAGGTCTCAACTCTGGTCAGCAAATATCCAGACATCAG
GGATGACCACATCGGTGCGCTGCTGGCCATGCGTGGGGATGCCAGCCGGGACATGAAGCAGACC
ATCATAGAGTCACTAGAGCAGGGCCCTACGCAGGCAAACCCCAACTACGTGCCCCTCTTCAGGG
AGATTGTTGTGCCCAGTCTGAATGTGGCAAAGCTCCTCAAGTAGCCGGCCGTTTGCTTGTGTAT
GTCCCTCTGAGGCAGAAGCATATTAAAGCAAATGTCCCTCTCCAGGGCCACCATTGGTGGTCTC
AGCAACAACATGCCTATCCTTAGATGTGCTCAAGTATGTGTGGGTGAGGGCTGTGGGGTGGCTT
CTGGGTGCCTGGTTCTGTGGGTTTTTCCACCCTGATGTAAATGTGCTTTGTGAGGACGTCTTTG
TATGAAGCCTCTCAGTCACTTGTCATGGGAAATGTGTGTGGGTGTCCCTTACTCCCCCATCACG
GGCCTCTCTGTCCAGCATGCACACTCAGGACCTCTGCCACCTGATTAAAAGAAGTGAAAGCCAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005407053	(Get FASTA)	NCBI Sequence Viewer
	XP_005407054	(Get FASTA)	NCBI Sequence Viewer
	XP_005407055	(Get FASTA)	NCBI Sequence Viewer
	XP_013361351	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000005400
	ENSCLAP00000005400.1

RefSeq Acc Id:	XP_005407054 ⟸ XM_005406997
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UUE3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKETDREAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQ LHNALNDVKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRE TQDLIEQGALLQAHRKLMDLECSRDGLMCEQYRMDSGNTRDMTLIHGYFGSTQGLSDELAKQLW MVLQRSLVTVRRDPTLLVSVVRIIEREEKIDKRILDRKKQTGFVPPGRPKNWKEKMFAILDRTV TTRIEGTQADTRESDKMWLVRHLEIIRKYVLDDLIIAKNLMVQCFPPHYEIFKNLLSMYHQALS TRMQDLASEDLEANEIVSLLTWVLNTYTSMEMMGNMELAPEVDVNALEPLLSSSVVSELLDTYM STLTSNIIAWLRKALETDKKDWSKETEPEADQDGYYQTTLPAIVFQMFEQNLQVASQISEDLKT KVLVLCLQQMNSFLSRYRDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKMFPCRESIVSL KKKYLKNEAEEGVCLSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWLVGSNAVDT ICVTVEDYFNDFAKIKRPYKKRMTAEAHRRVVVEYLRAIMQKRISFRSPEERKEGAEKMVREAE QLCFLFRKLASGFGEEVDGYCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLAM RGDASRDMKQTIIESLEQGPTQANPNYVPLFREIVVPSLNVAKLLK hide sequence

RefSeq Acc Id:	XP_005407053 ⟸ XM_005406996
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UUE3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKETDREAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQ LHNALNDVKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRE TQDLIEQGALLQAHRKLMDLECSRDGLMCEQYRMDSGNTRDMTLIHGYFGSTQGLSDELAKQLW MVLQRSLVTVRRDPTLLVSVVRIIEREEKIDKRILDRKKQTGFVPPGRPKNWKEKMFAILDRTV TTRIEGTQADTRESDKMWLVRHLEIIRKYVLDDLIIAKNLMVQCFPPHYEIFKNLLSMYHQALS TRMQDLASEDLEANEIVSLLTWVLNTYTSMEMMGNMELAPEVDVNALEPLLSSSVVSELLDTYM STLTSNIIAWLRKALETDKKDWSKETEPEADQDGYYQTTLPAIVFQMFEQNLQVASQISEDLKT KVLVLCLQQMNSFLSRYRDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKMFPCRESIVSL KKKYLKNEAEEGVCLSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWLVGSNAVDT ICVTVEDYFNDFAKIKRPYKKRMTAEAHRRVVVEYLRAIMQKRISFRSPEERKEGAEKMVREAE QLCFLFRKLASGFGEEVDGYCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLAM RGDASRDMKQTIIESLEQGPTQANPNYVPLFREIVVPSLNVAKLLK hide sequence

RefSeq Acc Id:	XP_005407055 ⟸ XM_005406998
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2UUE3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKETDREAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQ LHNALNDVKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRE TQDLIEQGALLQAHRKLMDLECSRDGLMCEQYRMDSGNTRDMTLIHGYFGSTQGLSDELAKQLW MVLQRSLVTVRRDPTLLVSVVRIIEREEKIDKRILDRKKQTGFVPPGRPKNWKEKMFAILDRTV TTRIEGTQADTRESDKMWLVRHLEIIRKYVLDDLIIAKNLMVQCFPPHYEIFKNLLSMYHQALS TRMQDLASEDLEANEIVSLLTWVLNTYTSMEMMGNMELAPEVDVNALEPLLSSSVVSELLDTYM STLTSNIIAWLRKALETDKKDWSKETEPEADQDGYYQTTLPAIVFQMFEQNLQVASQISEDLKT KVLVLCLQQMNSFLSRYRDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKMFPCRESIVSL KKKYLKNEAEEGVCLSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWLVGSNAVDT ICVTVEDYFNDFAKIKRPYKKRMTAEAHRRVVVEYLRAIMQKRISFRSPEERKEGAEKMVREAE QLCFLFRKLASGFGEEVDGYCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLAM RGDASRDMKQTIIESLEQGPTQANPNYVPLFREIVVPSLNVAKLLK hide sequence

RefSeq Acc Id:	XP_013361351 ⟸ XM_013505897
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2UUE3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKETDREAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQ LHNALNDVKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRE TQDLIEQGALLQAHRKLMDLECSRDGLMCEQYRMDSGNTRDMTLIHGYFGSTQGLSDELAKQLW MVLQRSLVTVRRDPTLLVSVVRIIEREEKIDKRILDRKKQTGFVPPGRPKNWKEKMFAILDRTV TTRIEGTQADTRESDKMWLVRHLEIIRKYVLDDLIIAKNLMVQCFPPHYEIFKNLLSMYHQALS TRMQDLASEDLEANEIVSLLTWVLNTYTSMEMMGNMELAPEVDVNALEPLLSSSVVSELLDTYM STLTSNIIAWLRKALETDKKDWSKETEPEADQDGYYQTTLPAIVFQMFEQNLQVASQISEDLKT KVLVLCLQQMNSFLSRYRDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIVSLKKKYL KNEAEEGVCLSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWLVGSNAVDTICVTV EDYFNDFAKIKRPYKKRMTAEAHRRVVVEYLRAIMQKRISFRSPEERKEGAEKMVREAEQLCFL FRKLASGFGEEVDGYCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLAMRGDAS RDMKQTIIESLEQGPTQANPNYVPLFREIVVPSLNVAKLLK hide sequence

RefSeq Acc Id:

ENSCLAP00000005400 ⟸ ENSCLAT00000005496

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003834	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000005496	ENTREZGENE
	ENSCLAT00000005496.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.357.50	UniProtKB/TrEMBL
	1.10.357.70	UniProtKB/TrEMBL
InterPro	EXOC3/Sec6	UniProtKB/TrEMBL
	EXOC3/Sec6_C	UniProtKB/TrEMBL
NCBI Gene	Exoc3	ENTREZGENE
PANTHER	EXOCYST COMPLEX COMPONENT 3	UniProtKB/TrEMBL
	PTHR21292	UniProtKB/TrEMBL
Pfam	Sec6	UniProtKB/TrEMBL
UniProt	A0A8C2UUE3	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)