Tmem205 (transmembrane protein 205) - Rat Genome Database

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Gene: Tmem205 (transmembrane protein 205) Chinchilla lanigera
Analyze
Symbol: Tmem205
Name: transmembrane protein 205
RGD ID: 8758501
Description: ASSOCIATED WITH alpha-mannosidosis (ortholog); Charcot-Marie-Tooth disease dominant intermediate B (ortholog); episodic ataxia type 2 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554952,261,163 - 2,262,589 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554952,261,287 - 2,263,244 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data
Tmem205
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554952,261,163 - 2,262,589 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554952,261,287 - 2,263,244 (-)NCBIChiLan1.0ChiLan1.0
TMEM205
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381911,342,778 - 11,346,492 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1911,342,776 - 11,346,518 (-)EnsemblGRCh38hg38GRCh38
GRCh371911,453,454 - 11,456,944 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361911,314,458 - 11,317,722 (-)NCBINCBI36Build 36hg18NCBI36
Celera1911,348,326 - 11,351,855 (-)NCBICelera
Cytogenetic Map19p13.2NCBI
HuRef1911,029,505 - 11,033,032 (-)NCBIHuRef
CHM1_11911,454,474 - 11,458,003 (-)NCBICHM1_1
T2T-CHM13v2.01911,469,756 - 11,473,392 (-)NCBIT2T-CHM13v2.0
Tmem205
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39921,832,305 - 21,838,831 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl921,832,304 - 21,838,852 (-)EnsemblGRCm39 Ensembl
GRCm38921,921,009 - 21,927,535 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl921,921,008 - 21,927,556 (-)EnsemblGRCm38mm10GRCm38
MGSCv37921,725,453 - 21,731,906 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36921,671,411 - 21,677,864 (-)NCBIMGSCv36mm8
Celera919,190,242 - 19,196,695 (-)NCBICelera
Cytogenetic Map9A3NCBI
cM Map97.92NCBI
Tmem205
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8828,728,172 - 28,733,908 (-)NCBIGRCr8
mRatBN7.2820,452,092 - 20,458,011 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl820,452,092 - 20,457,828 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx824,482,902 - 24,488,648 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0822,778,447 - 22,784,205 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0820,681,706 - 20,687,442 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0822,932,175 - 22,937,953 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl822,932,175 - 22,937,909 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0822,986,957 - 22,992,746 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4821,024,232 - 21,029,968 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera821,843,319 - 21,849,061 (-)NCBICelera
Cytogenetic Map8q13NCBI
TMEM205
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22016,256,748 - 16,260,357 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11915,255,428 - 15,259,038 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01910,890,020 - 10,893,608 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11911,601,256 - 11,604,289 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1911,601,256 - 11,604,203 (-)Ensemblpanpan1.1panPan2
TMEM205
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12049,970,042 - 49,973,040 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2049,970,508 - 49,973,041 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2049,843,559 - 49,846,544 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02050,490,772 - 50,493,757 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2050,463,366 - 50,493,758 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12049,701,055 - 49,704,040 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02050,127,429 - 50,130,414 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02050,370,387 - 50,373,372 (+)NCBIUU_Cfam_GSD_1.0
Tmem205
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118208,910,847 - 208,913,184 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366591,441,484 - 1,444,196 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366591,441,521 - 1,443,816 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMEM205
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl270,036,931 - 70,039,730 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1270,036,929 - 70,039,801 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2270,400,088 - 70,402,960 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TMEM205
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1610,276,362 - 10,280,154 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl610,276,364 - 10,279,534 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660749,613,565 - 9,617,579 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmem205
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248283,149,592 - 3,152,044 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248283,150,776 - 3,152,735 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: ENSCLAT00000010754   ⟹   ENSCLAP00000010622
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049554952,261,163 - 2,262,589 (-)Ensembl
RefSeq Acc Id: XM_005405655   ⟹   XP_005405712
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554952,261,287 - 2,263,148 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005405656   ⟹   XP_005405713
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554952,261,287 - 2,263,186 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005405657   ⟹   XP_005405714
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554952,261,287 - 2,263,244 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005405658   ⟹   XP_005405715
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554952,261,287 - 2,263,053 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005405659   ⟹   XP_005405716
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554952,261,287 - 2,263,053 (-)NCBI
Sequence:
RefSeq Acc Id: XP_005405714   ⟸   XM_005405657
- UniProtKB: A0A8C2V676 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005405713   ⟸   XM_005405656
- UniProtKB: A0A8C2V676 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005405712   ⟸   XM_005405655
- UniProtKB: A0A8C2V676 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005405715   ⟸   XM_005405658
- UniProtKB: A0A8C2V676 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005405716   ⟸   XM_005405659
- UniProtKB: A0A8C2V676 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000010622   ⟸   ENSCLAT00000010754
Protein Domains
DUF4149


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000007329 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000010754 ENTREZGENE
  ENSCLAT00000010754.1 UniProtKB/TrEMBL
InterPro DUF4149 UniProtKB/TrEMBL
  TMEM205 UniProtKB/TrEMBL
NCBI Gene Tmem205 ENTREZGENE
PANTHER PTHR46916 UniProtKB/TrEMBL
  TRANSMEMBRANE PROTEIN 205 UniProtKB/TrEMBL
Pfam DUF4149 UniProtKB/TrEMBL
UniProt A0A8C2V676 ENTREZGENE, UniProtKB/TrEMBL