Api5 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955422 | 4,121,837 - 4,149,471 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 4,121,913 - 4,149,242 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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API5 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 11 | 43,311,996 - 43,344,529 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 43,311,963 - 43,344,529 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 43,333,546 - 43,366,079 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 43,290,109 - 43,322,655 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 43,290,108 - 43,322,655 | NCBI | | | | | Celera | 11 | 43,480,519 - 43,513,094 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | p12 | NCBI | | | | | HuRef | 11 | 43,043,693 - 43,076,275 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 43,333,124 - 43,365,702 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 43,467,432 - 43,499,960 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Api5 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 94,242,073 - 94,268,490 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 94,242,027 - 94,268,481 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 94,411,727 - 94,438,186 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 94,411,682 - 94,438,136 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 94,251,884 - 94,278,304 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 94,212,571 - 94,238,912 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 95,808,356 - 95,834,786 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | E1 | NCBI | | | | | cM Map | 2 | 51.84 | NCBI | | | | |
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Api5 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 100,833,417 - 100,858,580 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 80,378,096 - 80,403,259 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 80,378,096 - 80,403,264 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 83,847,551 - 83,871,239 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 92,446,619 - 92,470,303 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 90,289,305 - 90,312,964 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 83,310,878 - 83,336,053 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 83,310,884 - 83,335,960 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 90,010,495 - 90,035,670 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 78,819,632 - 78,844,710 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 78,716,055 - 78,741,216 (-) | NCBI | | | | | Celera | 3 | 79,572,457 - 79,597,535 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q31 | NCBI | | | | |
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API5 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 9 | 45,529,815 - 45,562,403 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 45,539,563 - 45,572,154 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 43,279,024 - 43,311,602 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 43,759,414 - 43,791,975 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 43,759,414 - 43,791,975 (+) | Ensembl | panpan1.1 | | panPan2 | |
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API5 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 18 | 26,326,387 - 26,355,580 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 18 | 26,327,920 - 26,355,585 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 18 | 26,016,307 - 26,045,407 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 18 | 26,950,978 - 26,980,076 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 18 | 26,950,978 - 26,980,114 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UNSW_CanFamBas_1.0 | 18 | 26,106,836 - 26,135,908 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 18 | 26,718,679 - 26,747,755 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Api5 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404947 | 23,117,515 - 23,141,542 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936562 | 5,229,174 - 5,253,181 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936562 | 5,229,157 - 5,253,175 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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API5 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 2 | 18,962,270 - 18,994,240 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 2 | 18,962,262 - 18,994,235 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 2 | 20,666,705 - 20,698,683 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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API5 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 1 | 22,029,723 - 22,064,553 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 22,034,317 - 22,064,541 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666038 | 119,264,311 - 119,296,422 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Api5 (Heterocephalus glaber - naked mole-rat) |
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