Wrap53 (WD repeat containing antisense to TP53) - Rat Genome Database

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Gene: Wrap53 (WD repeat containing antisense to TP53) Chinchilla lanigera
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Symbol: Wrap53
Name: WD repeat containing antisense to TP53
RGD ID: 8737172
Description: ENCODES a protein that exhibits histone binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN Cajal body organization (ortholog); positive regulation of DNA repair (ortholog); positive regulation of double-strand break repair (ortholog); ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita (ortholog); autosomal recessive dyskeratosis congenita 3 (ortholog); Body Weight (ortholog); FOUND IN Cajal body (ortholog); cytosol (ortholog); nuclear body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: telomerase Cajal body protein 1; WD repeat containing, antisense to TP53
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554679,225,506 - 9,240,756 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Wrap53
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554679,225,506 - 9,240,756 (-)NCBIChiLan1.0ChiLan1.0
WRAP53
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38177,686,071 - 7,703,502 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl177,686,071 - 7,703,502 (+)EnsemblGRCh38hg38GRCh38
GRCh37177,589,389 - 7,606,820 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36177,532,520 - 7,547,544 (+)NCBINCBI36Build 36hg18NCBI36
Celera177,615,750 - 7,633,180 (+)NCBICelera
Cytogenetic Map17p13.1NCBI
HuRef177,482,804 - 7,500,156 (+)NCBIHuRef
CHM1_1177,598,524 - 7,615,973 (+)NCBICHM1_1
T2T-CHM13v2.0177,590,175 - 7,607,622 (+)NCBIT2T-CHM13v2.0
Wrap53
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391169,452,580 - 69,471,076 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1169,452,584 - 69,471,081 (-)EnsemblGRCm39 Ensembl
GRCm381169,561,754 - 69,580,250 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1169,561,758 - 69,580,255 (-)EnsemblGRCm38mm10GRCm38
MGSCv371169,375,256 - 69,392,826 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361169,377,949 - 69,395,519 (-)NCBIMGSCv36mm8
Celera1176,524,707 - 76,542,284 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1142.81NCBI
Wrap53
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81054,780,873 - 54,797,919 (-)NCBIGRCr8
mRatBN7.21054,282,092 - 54,299,908 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1054,282,105 - 54,298,929 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1058,944,501 - 58,961,275 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01058,433,045 - 58,449,818 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01053,940,731 - 53,957,518 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01056,169,024 - 56,185,800 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1056,169,025 - 56,185,857 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01055,914,380 - 55,931,438 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41056,380,914 - 56,398,501 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11056,394,537 - 56,412,124 (-)NCBI
Celera1053,436,325 - 53,453,155 (-)NCBICelera
Cytogenetic Map10q24NCBI
WRAP53
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21915,280,889 - 15,298,965 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11717,246,094 - 17,265,011 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0177,715,897 - 7,735,873 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1177,707,220 - 7,723,410 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl177,707,221 - 7,723,394 (+)Ensemblpanpan1.1panPan2
WRAP53
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1532,574,153 - 32,586,222 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl532,574,134 - 32,594,333 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha532,712,138 - 32,725,180 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0532,677,789 - 32,690,832 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl532,678,578 - 32,690,834 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1532,645,668 - 32,658,710 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0532,601,891 - 32,614,933 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0532,780,842 - 32,793,885 (+)NCBIUU_Cfam_GSD_1.0
Wrap53
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560247,461,298 - 47,478,596 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936595936,487 - 952,791 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936595936,184 - 952,784 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WRAP53
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1252,954,669 - 52,968,364 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11252,954,674 - 52,968,371 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21255,205,960 - 55,219,648 (-)NCBISscrofa10.2Sscrofa10.2susScr3
WRAP53
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1167,065,531 - 7,085,590 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl167,066,333 - 7,085,625 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605914,323,308 - 14,343,301 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wrap53
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478610,283,984 - 10,296,729 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478610,283,721 - 10,296,568 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_005399465   ⟹   XP_005399522
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554679,225,506 - 9,240,749 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013522145   ⟹   XP_013377599
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049554679,225,506 - 9,240,756 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005399522 (Get FASTA)   NCBI Sequence Viewer  
  XP_013377599 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_005399522   ⟸   XM_005399465
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013377599   ⟸   XM_013522145
- Peptide Label: isoform X1
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene Wrap53 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-03 Wrap53  WD repeat containing antisense to TP53    WD repeat containing, antisense to TP53  Symbol and/or name change 5135510 APPROVED