ZNF519P1 (zinc finger protein 519 pseudogene 1) - Rat Genome Database

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Gene: ZNF519P1 (zinc finger protein 519 pseudogene 1) Homo sapiens
Analyze
Symbol: ZNF519P1
Name: zinc finger protein 519 pseudogene 1
RGD ID: 8662746
HGNC Page HGNC:50785
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: ZNF519  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381080,298,178 - 80,299,202 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1080,297,720 - 80,299,655 (+)EnsemblGRCh38hg38GRCh38
GRCh371082,057,934 - 82,058,958 (+)NCBIGRCh37GRCh37hg19GRCh37
Celera1076,048,284 - 76,049,567 (+)NCBICelera
Cytogenetic Map10q22.3NCBI
HuRef1075,901,147 - 75,902,430 (+)NCBIHuRef
CHM1_11082,340,988 - 82,342,271 (+)NCBICHM1_1
T2T-CHM13v2.01081,167,277 - 81,168,301 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:39
Count of miRNA genes:38
Interacting mature miRNAs:38
Transcripts:ENST00000449011
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 2 2 2
Below cutoff 59 93 84 40 48 36 145 53 189 2 299 201 4 44 96

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000449011
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1080,297,720 - 80,299,655 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC ZNF519P1 COSMIC
Ensembl Genes ENSG00000232950 Ensembl
GTEx ENSG00000232950 GTEx
HGNC ID HGNC:50785 ENTREZGENE
Human Proteome Map ZNF519P1 Human Proteome Map
NCBI Gene ZNF519P1 ENTREZGENE