NACAP7 (NACA pseudogene 7) - Rat Genome Database

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Gene: NACAP7 (NACA pseudogene 7) Homo sapiens
Analyze
Symbol: NACAP7
Name: NACA pseudogene 7
RGD ID: 8160177
HGNC Page HGNC:49494
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: nascent polypeptide associated complex alpha subunit pseudogene 7
Related Functional Gene: NACA  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38689,421,990 - 89,422,670 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl689,422,099 - 89,423,048 (-)EnsemblGRCh38hg38GRCh38
GRCh37690,131,709 - 90,132,389 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map6q15NCBI
HuRef687,348,946 - 87,399,888 (-)NCBIHuRef
CHM1_1690,229,460 - 90,280,260 (-)NCBICHM1_1
T2T-CHM13v2.0690,631,355 - 90,632,035 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:57
Count of miRNA genes:56
Interacting mature miRNAs:56
Transcripts:ENST00000407371
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 2 1 2 1 1 1 2
Below cutoff 141 173 94 18 74 8 331 135 221 29 95 113 10 98 214

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000407371
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl689,422,099 - 89,423,048 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC NACAP7 COSMIC
Ensembl Genes ENSG00000218965 Ensembl
GTEx ENSG00000218965 GTEx
HGNC ID HGNC:49494 ENTREZGENE
Human Proteome Map NACAP7 Human Proteome Map
NCBI Gene NACAP7 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-01 NACAP7  NACA pseudogene 7    nascent polypeptide associated complex alpha subunit pseudogene 7  Symbol and/or name change 5135510 APPROVED
2015-11-24 NACAP7  nascent polypeptide associated complex alpha subunit pseudogene 7    nascent-polypeptide-associated complex alpha polypeptide pseudogene 7  Symbol and/or name change 5135510 APPROVED