HERPUD1 (homocysteine inducible ER protein with ubiquitin like domain 1) - Rat Genome Database

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Gene: HERPUD1 (homocysteine inducible ER protein with ubiquitin like domain 1) Homo sapiens
Analyze
Symbol: HERPUD1
Name: homocysteine inducible ER protein with ubiquitin like domain 1
RGD ID: 733943
HGNC Page HGNC:13744
Description: Enables transmembrane transporter binding activity. Involved in several processes, including negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; positive regulation of proteolysis involved in protein catabolic process; and retrograde protein transport, ER to cytosol. Located in Lewy body core and endoplasmic reticulum membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: HERP; homocysteine-inducible endoplasmic reticulum stress-inducible ubiquitin-like domain member 1 protein; homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1; homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; KIAA0025; methyl methanesulfonate (MMF)-inducible fragment protein 1; Mif1; MMS-inducible; SUP
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381656,932,142 - 56,944,864 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1656,932,142 - 56,944,864 (+)EnsemblGRCh38hg38GRCh38
GRCh371656,966,054 - 56,978,776 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361655,523,249 - 55,535,294 (+)NCBINCBI36Build 36hg18NCBI36
Build 341655,523,248 - 55,535,294NCBI
Celera1641,466,026 - 41,478,076 (+)NCBICelera
Cytogenetic Map16q13NCBI
HuRef1642,835,319 - 42,847,282 (+)NCBIHuRef
CHM1_11658,373,967 - 58,385,760 (+)NCBICHM1_1
T2T-CHM13v2.01662,728,473 - 62,741,195 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-epigallocatechin 3-gallate  (EXP)
1,2-dimethylhydrazine  (ISO)
1-naphthyl isothiocyanate  (EXP)
14-Deoxy-11,12-didehydroandrographolide  (EXP)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
2-hydroxypropanoic acid  (EXP)
3,3',4,4'-tetrachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
4-phenylbutylamine  (ISO)
5-fluorouracil  (EXP)
acrolein  (EXP,ISO)
acrylamide  (EXP)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucosamine  (ISO)
aldehydo-D-glucose  (ISO)
amiodarone  (EXP)
ammonium chloride  (ISO)
antimycin A  (EXP)
aristolochic acid A  (EXP)
atrazine  (ISO)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (EXP)
Benzo[k]fluoranthene  (ISO)
beta-D-glucosamine  (ISO)
bexarotene  (EXP)
bilirubin IXalpha  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
boric acid  (EXP)
buspirone  (ISO)
butan-1-ol  (EXP)
cadmium sulfate  (EXP)
cannabidiol  (EXP,ISO)
carbamazepine  (EXP)
carbaryl  (EXP)
carbon nanotube  (ISO)
chenodeoxycholic acid  (EXP)
chloropicrin  (EXP)
chlorpyrifos  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (EXP)
clofibrate  (ISO)
cobalt dichloride  (EXP)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (EXP)
corosolic acid  (EXP)
crocidolite asbestos  (EXP,ISO)
cyclosporin A  (EXP,ISO)
cyproconazole  (ISO)
D-glucose  (ISO)
deguelin  (EXP)
deoxycholic acid  (EXP)
dibutyl phthalate  (ISO)
dichloroacetic acid  (ISO)
diclofenac  (EXP,ISO)
Didecyldimethylammonium  (EXP)
dimethylarsinous acid  (EXP)
dioxygen  (ISO)
dorsomorphin  (EXP)
doxorubicin  (ISO)
elesclomol  (EXP)
endosulfan  (ISO)
epoxiconazole  (ISO)
Erionite  (ISO)
ethanol  (ISO)
fenpyroximate  (EXP)
fluoranthene  (ISO)
furan  (ISO)
gentamycin  (ISO)
glucose  (ISO)
glycochenodeoxycholic acid  (EXP)
glycocholic acid  (EXP)
glycodeoxycholic acid  (EXP)
inulin  (ISO)
iron dichloride  (EXP)
isoprenaline  (ISO)
L-ascorbic acid  (EXP)
L-serine  (EXP)
lead diacetate  (ISO)
levofloxacin  (ISO)
Licochalcone B  (EXP)
lipopolysaccharide  (ISO)
menadione  (EXP)
mercury dibromide  (EXP)
metformin  (ISO)
methamphetamine  (ISO)
methapyrilene  (ISO)
methotrexate  (ISO)
methylmercury chloride  (EXP)
methylparaben  (EXP)
N(4)-hydroxycytidine  (ISO)
N-acetyl-L-cysteine  (EXP)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-nitrosodiethylamine  (ISO)
nefazodone  (EXP,ISO)
nimesulide  (ISO)
nitrofen  (ISO)
Nivalenol  (ISO)
organoselenium compound  (EXP)
oxidopamine  (ISO)
ozone  (ISO)
p-chloromercuribenzoic acid  (EXP)
paracetamol  (ISO)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
phenobarbital  (EXP,ISO)
phenylmercury acetate  (EXP)
phlorizin  (ISO)
phorone  (ISO)
picoxystrobin  (EXP)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
prochloraz  (ISO)
progesterone  (EXP)
pyrimidifen  (EXP)
quercetin  (EXP)
rac-lactic acid  (EXP)
raloxifene  (EXP)
resveratrol  (ISO)
SB 431542  (EXP)
SCH 23390  (ISO)
sertraline  (EXP)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenite  (EXP)
sodium dichromate  (ISO)
succimer  (EXP)
sulforaphane  (ISO)
sulindac  (EXP)
sunitinib  (EXP)
tacrolimus hydrate  (ISO)
tamoxifen  (ISO)
tebufenpyrad  (EXP)
testosterone  (ISO)
tetrachloromethane  (ISO)
thalidomide  (EXP)
thapsigargin  (EXP)
Theaflavin 3,3'-digallate  (EXP)
thifluzamide  (EXP)
thioacetamide  (ISO)
titanium dioxide  (ISO)
tremolite asbestos  (ISO)
Tributyltin oxide  (EXP,ISO)
trichloroethene  (ISO)
triphenyl phosphate  (ISO)
Triptolide  (ISO)
triptonide  (ISO)
troglitazone  (ISO)
trovafloxacin  (ISO)
tunicamycin  (EXP,ISO)
urethane  (EXP)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (ISO)
zearalenone  (ISO)
zinc atom  (EXP)
zinc(0)  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Herp, a new ubiquitin-like membrane protein induced by endoplasmic reticulum stress. Kokame K, etal., J Biol Chem 2000 Oct 20;275(42):32846-53.
3. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7584026   PMID:8125298   PMID:8619474   PMID:9110174   PMID:10708769   PMID:11112790   PMID:11799129   PMID:12153396   PMID:12370023   PMID:12477932   PMID:14550564   PMID:15102845  
PMID:15147274   PMID:15489334   PMID:16169070   PMID:16189514   PMID:16289116   PMID:16344560   PMID:16713569   PMID:16940180   PMID:17020760   PMID:17310145   PMID:17420289   PMID:18042451  
PMID:18307982   PMID:18656546   PMID:19223579   PMID:19251110   PMID:19447887   PMID:19788048   PMID:19946888   PMID:20031564   PMID:20054003   PMID:20147634   PMID:20604806   PMID:20694148  
PMID:20838585   PMID:20936779   PMID:21149444   PMID:21636303   PMID:21832049   PMID:21873635   PMID:21900206   PMID:21965653   PMID:22045699   PMID:23372434   PMID:23505323   PMID:23867461  
PMID:24120520   PMID:24366945   PMID:24496447   PMID:24886709   PMID:25409783   PMID:25637874   PMID:25660456   PMID:26186194   PMID:26424800   PMID:26471130   PMID:26616647   PMID:26823705  
PMID:27084451   PMID:27405867   PMID:28298427   PMID:28423700   PMID:28430789   PMID:28514442   PMID:28827405   PMID:28954889   PMID:29117863   PMID:29180619   PMID:29295953   PMID:29430620  
PMID:29863080   PMID:30442662   PMID:31056421   PMID:31073040   PMID:32488540   PMID:32614325   PMID:32738194   PMID:33263384   PMID:33961781   PMID:34079125   PMID:34353909   PMID:34672954  
PMID:36220983   PMID:36544104   PMID:36746840  


Genomics

Comparative Map Data
HERPUD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381656,932,142 - 56,944,864 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1656,932,142 - 56,944,864 (+)EnsemblGRCh38hg38GRCh38
GRCh371656,966,054 - 56,978,776 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361655,523,249 - 55,535,294 (+)NCBINCBI36Build 36hg18NCBI36
Build 341655,523,248 - 55,535,294NCBI
Celera1641,466,026 - 41,478,076 (+)NCBICelera
Cytogenetic Map16q13NCBI
HuRef1642,835,319 - 42,847,282 (+)NCBIHuRef
CHM1_11658,373,967 - 58,385,760 (+)NCBICHM1_1
T2T-CHM13v2.01662,728,473 - 62,741,195 (+)NCBIT2T-CHM13v2.0
Herpud1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39895,113,057 - 95,121,999 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl895,113,066 - 95,122,005 (+)EnsemblGRCm39 Ensembl
GRCm38894,386,429 - 94,395,371 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl894,386,438 - 94,395,377 (+)EnsemblGRCm38mm10GRCm38
MGSCv37896,910,400 - 96,919,258 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36897,275,629 - 97,284,487 (+)NCBIMGSCv36mm8
Celera898,718,356 - 98,727,224 (+)NCBICelera
Cytogenetic Map8C5NCBI
cM Map846.46NCBI
Herpud1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81910,604,360 - 10,624,168 (-)NCBIGRCr8
mRatBN7.21910,598,411 - 10,609,002 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1910,598,417 - 10,618,424 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1910,561,735 - 10,572,117 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01911,328,571 - 11,338,953 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01910,615,556 - 10,625,938 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01911,046,905 - 11,057,440 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1911,046,909 - 11,057,254 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01911,027,622 - 11,038,305 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41911,036,567 - 11,046,914 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11911,041,392 - 11,051,740 (-)NCBI
Celera1910,486,005 - 10,496,352 (-)NCBICelera
Cytogenetic Map19p13NCBI
Herpud1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543314,608,375 - 14,621,839 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495543314,609,275 - 14,621,774 (+)NCBIChiLan1.0ChiLan1.0
HERPUD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21866,403,188 - 66,416,171 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11672,323,881 - 72,336,865 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01637,210,170 - 37,221,961 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11656,343,025 - 56,355,164 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1656,343,025 - 56,355,164 (+)Ensemblpanpan1.1panPan2
HERPUD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1259,388,492 - 59,400,028 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl259,388,494 - 59,400,003 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha256,017,333 - 56,028,868 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0259,927,541 - 59,939,082 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl259,927,546 - 59,939,082 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1256,758,736 - 56,770,263 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0257,766,037 - 57,777,356 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0258,660,262 - 58,671,800 (-)NCBIUU_Cfam_GSD_1.0
Herpud1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934950,486,978 - 50,497,944 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364759,091,176 - 9,102,109 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364759,091,115 - 9,102,101 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HERPUD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl618,901,297 - 18,913,424 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1618,901,171 - 18,913,427 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
HERPUD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1542,877,812 - 42,889,576 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl542,877,781 - 42,890,298 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604733,458,778 - 33,470,865 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Herpud1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474629,068,350 - 29,081,085 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474629,069,995 - 29,081,085 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in HERPUD1
6 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 16q13-22.2(chr16:56883592-71279975)x3 copy number gain See cases [RCV000052405] Chr16:56883592..71279975 [GRCh38]
Chr16:56917504..71313878 [GRCh37]
Chr16:55475005..69871379 [NCBI36]
Chr16:16q13-22.2
pathogenic
GRCh38/hg38 16q12.2-21(chr16:55457477-63841622)x1 copy number loss See cases [RCV000133738] Chr16:55457477..63841622 [GRCh38]
Chr16:55491389..63875526 [GRCh37]
Chr16:54048890..62433027 [NCBI36]
Chr16:16q12.2-21
pathogenic
GRCh38/hg38 16q12.2-24.3(chr16:52899183-90088654)x3 copy number gain See cases [RCV000143425] Chr16:52899183..90088654 [GRCh38]
Chr16:52933095..90155062 [GRCh37]
Chr16:51490596..88682563 [NCBI36]
Chr16:16q12.2-24.3
pathogenic
GRCh38/hg38 16q12.1-22.1(chr16:49685521-68401712)x3 copy number gain See cases [RCV000143752] Chr16:49685521..68401712 [GRCh38]
Chr16:49719432..68435615 [GRCh37]
Chr16:48276933..66993116 [NCBI36]
Chr16:16q12.1-22.1
pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46615804-90142285)x1 copy number loss Breast ductal adenocarcinoma [RCV000207138] Chr16:46615804..90142285 [GRCh37]
Chr16:16q11.2-24.3
uncertain significance
GRCh37/hg19 16q12.2-22.2(chr16:55359026-70884455)x1 copy number loss Breast ductal adenocarcinoma [RCV000207067] Chr16:55359026..70884455 [GRCh37]
Chr16:16q12.2-22.2
likely pathogenic|uncertain significance
Single allele complex Breast ductal adenocarcinoma [RCV000207314] Chr16:56368689..90141355 [GRCh37]
Chr16:16q12.2-24.3
uncertain significance
GRCh37/hg19 16q11.2-24.3(chr16:46464488-90155062)x3 copy number gain See cases [RCV000446110] Chr16:46464488..90155062 [GRCh37]
Chr16:16q11.2-24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:69193-90274381)x3 copy number gain See cases [RCV000446684] Chr16:69193..90274381 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p11.2-q21(chr16:34197492-64509054)x3 copy number gain See cases [RCV000511791] Chr16:34197492..64509054 [GRCh37]
Chr16:16p11.2-q21
pathogenic
GRCh37/hg19 16p13.2-q24.3(chr16:9273328-89548493)x3 copy number gain See cases [RCV000511622] Chr16:9273328..89548493 [GRCh37]
Chr16:16p13.2-q24.3
uncertain significance
GRCh37/hg19 16q12.2-13(chr16:56492890-57056368)x3 copy number gain See cases [RCV000511577] Chr16:56492890..57056368 [GRCh37]
Chr16:16q12.2-13
uncertain significance
GRCh37/hg19 16q11.2-24.3(chr16:46497599-90354753)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626429] Chr16:46497599..90354753 [GRCh37]
Chr16:16q11.2-24.3
drug response
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062) copy number gain See cases [RCV000511296] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062)x3 copy number gain See cases [RCV000512138] Chr16:85881..90155062 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46455960-90354753)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626435] Chr16:46455960..90354753 [GRCh37]
Chr16:16q11.2-24.3
drug response
GRCh37/hg19 16q12.2-22.2(chr16:54416050-72453266)x3 copy number gain not provided [RCV000683820] Chr16:54416050..72453266 [GRCh37]
Chr16:16q12.2-22.2
pathogenic
GRCh37/hg19 16q13(chr16:56917544-57046525)x3 copy number gain not provided [RCV000683822] Chr16:56917544..57046525 [GRCh37]
Chr16:16q13
uncertain significance
GRCh37/hg19 16q13-21(chr16:56950941-60203590)x1 copy number loss not provided [RCV000683823] Chr16:56950941..60203590 [GRCh37]
Chr16:16q13-21
pathogenic|likely pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90274695)x3 copy number gain not provided [RCV000738918] Chr16:88165..90274695 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:61451-90294632)x3 copy number gain not provided [RCV000738915] Chr16:61451..90294632 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90163275)x3 copy number gain not provided [RCV000738917] Chr16:88165..90163275 [GRCh37]
Chr16:16p13.3-q24.3
pathogenic
GRCh37/hg19 16q12.2-21(chr16:53455650-64006604)x3 copy number gain not provided [RCV000848548] Chr16:53455650..64006604 [GRCh37]
Chr16:16q12.2-21
uncertain significance
NM_014685.4(HERPUD1):c.980T>G (p.Val327Gly) single nucleotide variant not specified [RCV004286363] Chr16:56942206 [GRCh38]
Chr16:56976118 [GRCh37]
Chr16:16q13
uncertain significance
Single allele duplication not provided [RCV001542388] Chr16:46385317..61223349 [GRCh38]
Chr16:16q11.2-21
pathogenic
GRCh37/hg19 16q11.2-21(chr16:46503573-62203182)x3 copy number gain not provided [RCV002472562] Chr16:46503573..62203182 [GRCh37]
Chr16:16q11.2-21
pathogenic
NM_014685.4(HERPUD1):c.584_585del (p.Phe195fs) deletion Hereditary breast ovarian cancer syndrome [RCV001374513] Chr16:56939922..56939923 [GRCh38]
Chr16:56973834..56973835 [GRCh37]
Chr16:16q13
pathogenic
GRCh37/hg19 16q11.2-24.3(chr16:46503968-90155062)x3 copy number gain not provided [RCV002221458] Chr16:46503968..90155062 [GRCh37]
Chr16:16q11.2-24.3
pathogenic
NC_000016.9:g.(?_56226148)_(58768132_?)del deletion Bardet-Biedl syndrome [RCV003119976]|Early infantile epileptic encephalopathy with suppression bursts [RCV003109791] Chr16:56226148..58768132 [GRCh37]
Chr16:16q12.2-21
pathogenic
Single allele deletion not provided [RCV002266766] Chr16:53818483..57631312 [GRCh38]
Chr16:16q12.2-21
pathogenic
NM_014685.4(HERPUD1):c.295G>A (p.Ala99Thr) single nucleotide variant not specified [RCV004221267] Chr16:56935470 [GRCh38]
Chr16:56969382 [GRCh37]
Chr16:16q13
likely benign
NM_014685.4(HERPUD1):c.22G>A (p.Glu8Lys) single nucleotide variant not specified [RCV004257611] Chr16:56932266 [GRCh38]
Chr16:56966178 [GRCh37]
Chr16:16q13
uncertain significance
GRCh37/hg19 16q12.2-22.1(chr16:55329260-67180113)x1 copy number loss not specified [RCV003987196] Chr16:55329260..67180113 [GRCh37]
Chr16:16q12.2-22.1
pathogenic
NM_014685.4(HERPUD1):c.316G>A (p.Glu106Lys) single nucleotide variant not specified [RCV004404316] Chr16:56936702 [GRCh38]
Chr16:56970614 [GRCh37]
Chr16:16q13
uncertain significance
NM_014685.4(HERPUD1):c.477C>G (p.Phe159Leu) single nucleotide variant not specified [RCV004404317] Chr16:56939282 [GRCh38]
Chr16:56973194 [GRCh37]
Chr16:16q13
uncertain significance
NM_014685.4(HERPUD1):c.912C>A (p.His304Gln) single nucleotide variant not specified [RCV004404318] Chr16:56942138 [GRCh38]
Chr16:56976050 [GRCh37]
Chr16:16q13
uncertain significance
NM_014685.4(HERPUD1):c.941C>T (p.Pro314Leu) single nucleotide variant not specified [RCV004404320] Chr16:56942167 [GRCh38]
Chr16:56976079 [GRCh37]
Chr16:16q13
likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2688
Count of miRNA genes:903
Interacting mature miRNAs:1056
Transcripts:ENST00000300302, ENST00000344114, ENST00000379792, ENST00000439977, ENST00000562914, ENST00000563343, ENST00000563781, ENST00000563911, ENST00000564678, ENST00000565966, ENST00000566550, ENST00000567944, ENST00000568358, ENST00000568651, ENST00000568676, ENST00000568814, ENST00000569429, ENST00000569569, ENST00000570273
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SHGC-61031  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371656,977,387 - 56,977,585UniSTSGRCh37
Build 361655,534,888 - 55,535,086RGDNCBI36
Celera1641,477,670 - 41,477,868RGD
Cytogenetic Map16q13UniSTS
HuRef1642,846,876 - 42,847,074UniSTS
GeneMap99-GB4 RH Map16372.0UniSTS
D16S3200  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371656,977,206 - 56,977,375UniSTSGRCh37
Build 361655,534,707 - 55,534,876RGDNCBI36
Celera1641,477,489 - 41,477,658RGD
Cytogenetic Map16q13UniSTS
HuRef1642,846,695 - 42,846,864UniSTS
GeneMap99-G3 RH Map162466.0UniSTS
RH25263  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371656,977,228 - 56,977,374UniSTSGRCh37
Build 361655,534,729 - 55,534,875RGDNCBI36
Celera1641,477,511 - 41,477,657RGD
Cytogenetic Map16q13UniSTS
HuRef1642,846,717 - 42,846,863UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 2430 2908 1721 622 1916 464 4323 2145 3622 416 1447 1606 171 1204 2788 4
Low 2 76 2 32 32 48 86 2 2 2
Below cutoff 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001010989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001272103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_014685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB034989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB034990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC012181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF055001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF055003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF217990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ250249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK223233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK292088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK302167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC008320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG685245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI520043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD358537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR457116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D14695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA581153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ837586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU720377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000300302   ⟹   ENSP00000300302
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,932,147 - 56,943,881 (+)Ensembl
RefSeq Acc Id: ENST00000344114   ⟹   ENSP00000340931
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,932,147 - 56,943,881 (+)Ensembl
RefSeq Acc Id: ENST00000379792   ⟹   ENSP00000369118
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,932,160 - 56,943,886 (+)Ensembl
RefSeq Acc Id: ENST00000439977   ⟹   ENSP00000409555
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,932,142 - 56,944,864 (+)Ensembl
RefSeq Acc Id: ENST00000562914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,932,142 - 56,935,554 (+)Ensembl
RefSeq Acc Id: ENST00000563343   ⟹   ENSP00000455094
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,933,208 - 56,939,946 (+)Ensembl
RefSeq Acc Id: ENST00000563781
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,935,378 - 56,942,202 (+)Ensembl
RefSeq Acc Id: ENST00000563911   ⟹   ENSP00000455841
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,936,724 - 56,943,557 (+)Ensembl
RefSeq Acc Id: ENST00000564678
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,935,951 - 56,943,877 (+)Ensembl
RefSeq Acc Id: ENST00000565966   ⟹   ENSP00000456384
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,932,147 - 56,940,047 (+)Ensembl
RefSeq Acc Id: ENST00000566550
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,934,965 - 56,935,563 (+)Ensembl
RefSeq Acc Id: ENST00000567944
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,939,144 - 56,940,113 (+)Ensembl
RefSeq Acc Id: ENST00000568358   ⟹   ENSP00000457095
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,935,402 - 56,943,548 (+)Ensembl
RefSeq Acc Id: ENST00000568651   ⟹   ENSP00000457955
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,939,249 - 56,943,297 (+)Ensembl
RefSeq Acc Id: ENST00000568676
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,932,147 - 56,935,648 (+)Ensembl
RefSeq Acc Id: ENST00000568814
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,942,011 - 56,943,407 (+)Ensembl
RefSeq Acc Id: ENST00000569429   ⟹   ENSP00000457321
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,933,184 - 56,939,992 (+)Ensembl
RefSeq Acc Id: ENST00000569569
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,932,147 - 56,937,413 (+)Ensembl
RefSeq Acc Id: ENST00000570273
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1656,932,148 - 56,943,599 (+)Ensembl
RefSeq Acc Id: NM_001010989   ⟹   NP_001010989
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381656,932,142 - 56,944,864 (+)NCBI
GRCh371656,965,974 - 56,977,793 (+)NCBI
Build 361655,523,249 - 55,535,294 (+)NCBI Archive
HuRef1642,835,319 - 42,847,282 (+)NCBI
CHM1_11658,373,967 - 58,385,760 (+)NCBI
T2T-CHM13v2.01662,728,473 - 62,741,195 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001272103   ⟹   NP_001259032
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381656,932,142 - 56,944,864 (+)NCBI
HuRef1642,835,319 - 42,847,282 (+)NCBI
CHM1_11658,373,967 - 58,385,760 (+)NCBI
T2T-CHM13v2.01662,728,473 - 62,741,195 (+)NCBI
Sequence:
RefSeq Acc Id: NM_014685   ⟹   NP_055500
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381656,932,142 - 56,944,864 (+)NCBI
GRCh371656,965,974 - 56,977,793 (+)NCBI
Build 361655,523,249 - 55,535,294 (+)NCBI Archive
HuRef1642,835,319 - 42,847,282 (+)NCBI
CHM1_11658,373,967 - 58,385,760 (+)NCBI
T2T-CHM13v2.01662,728,473 - 62,741,195 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001010989 (Get FASTA)   NCBI Sequence Viewer  
  NP_001259032 (Get FASTA)   NCBI Sequence Viewer  
  NP_055500 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC09355 (Get FASTA)   NCBI Sequence Viewer  
  AAC09357 (Get FASTA)   NCBI Sequence Viewer  
  AAG17233 (Get FASTA)   NCBI Sequence Viewer  
  AAH00086 (Get FASTA)   NCBI Sequence Viewer  
  AAH08320 (Get FASTA)   NCBI Sequence Viewer  
  AAH09739 (Get FASTA)   NCBI Sequence Viewer  
  AAH32673 (Get FASTA)   NCBI Sequence Viewer  
  ABI18163 (Get FASTA)   NCBI Sequence Viewer  
  APU88432 (Get FASTA)   NCBI Sequence Viewer  
  BAA03521 (Get FASTA)   NCBI Sequence Viewer  
  BAB07891 (Get FASTA)   NCBI Sequence Viewer  
  BAB19010 (Get FASTA)   NCBI Sequence Viewer  
  BAD96953 (Get FASTA)   NCBI Sequence Viewer  
  BAF84254 (Get FASTA)   NCBI Sequence Viewer  
  BAF84777 (Get FASTA)   NCBI Sequence Viewer  
  BAG63534 (Get FASTA)   NCBI Sequence Viewer  
  BAG65550 (Get FASTA)   NCBI Sequence Viewer  
  CAG33397 (Get FASTA)   NCBI Sequence Viewer  
  EAW82892 (Get FASTA)   NCBI Sequence Viewer  
  EAW82893 (Get FASTA)   NCBI Sequence Viewer  
  EAW82894 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000300302
  ENSP00000300302.5
  ENSP00000340931.4
  ENSP00000369118.2
  ENSP00000409555
  ENSP00000409555.2
  ENSP00000455094.1
  ENSP00000455841.1
  ENSP00000456384.1
  ENSP00000457095.1
  ENSP00000457321.1
  ENSP00000457955.1
GenBank Protein Q15011 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_055500   ⟸   NM_014685
- Peptide Label: isoform 1
- UniProtKB: Q6IAN8 (UniProtKB/Swiss-Prot),   O60644 (UniProtKB/Swiss-Prot),   E9PGD1 (UniProtKB/Swiss-Prot),   Q96D92 (UniProtKB/Swiss-Prot),   Q15011 (UniProtKB/Swiss-Prot),   Q53FP9 (UniProtKB/TrEMBL),   A0A2Z2EHH6 (UniProtKB/TrEMBL),   A8K6A0 (UniProtKB/TrEMBL),   A8K7S3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001010989   ⟸   NM_001010989
- Peptide Label: isoform 2
- UniProtKB: A0A2Z2EHH6 (UniProtKB/TrEMBL),   A8K6A0 (UniProtKB/TrEMBL),   A8K7S3 (UniProtKB/TrEMBL),   Q53FP9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001259032   ⟸   NM_001272103
- Peptide Label: isoform 4
- UniProtKB: A4UAE9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000457321   ⟸   ENST00000569429
RefSeq Acc Id: ENSP00000409555   ⟸   ENST00000439977
RefSeq Acc Id: ENSP00000369118   ⟸   ENST00000379792
RefSeq Acc Id: ENSP00000455094   ⟸   ENST00000563343
RefSeq Acc Id: ENSP00000455841   ⟸   ENST00000563911
RefSeq Acc Id: ENSP00000300302   ⟸   ENST00000300302
RefSeq Acc Id: ENSP00000456384   ⟸   ENST00000565966
RefSeq Acc Id: ENSP00000457095   ⟸   ENST00000568358
RefSeq Acc Id: ENSP00000457955   ⟸   ENST00000568651
RefSeq Acc Id: ENSP00000340931   ⟸   ENST00000344114
Protein Domains
Ubiquitin-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q15011-F1-model_v2 AlphaFold Q15011 1-391 view protein structure

Promoters
RGD ID:6793177
Promoter ID:HG_KWN:23872
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001010989,   NM_001010990,   NM_014685,   UC010CCO.1,   UC010CCP.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361655,522,751 - 55,523,652 (+)MPROMDB
RGD ID:6852330
Promoter ID:EP73972
Type:multiple initiation site
Name:HS_HERPUD1
Description:Homocysteine-inducible, endoplasmic reticulum stress-inducible, 1iquitin-like domain member 1.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Mammalian gene collection (MGC) full-length cDNA cloning
Position:
Human AssemblyChrPosition (strand)Source
Build 361655,523,573 - 55,523,633EPD
RGD ID:6810945
Promoter ID:HG_ACW:30837
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:HERPUD1.LAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 361655,524,104 - 55,524,604 (+)MPROMDB
RGD ID:6793179
Promoter ID:HG_KWN:23873
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:UC002EKH.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361655,526,371 - 55,528,207 (+)MPROMDB
RGD ID:6810948
Promoter ID:HG_ACW:30838
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:HERPUD1.QAPR07-UNSPLICED,   HERPUD1.SAPR07,   HERPUD1.UAPR07
Position:
Human AssemblyChrPosition (strand)Source
Build 361655,532,546 - 55,533,547 (+)MPROMDB
RGD ID:7232299
Promoter ID:EPDNEW_H21895
Type:initiation region
Name:HERPUD1_1
Description:homocysteine inducible ER protein with ubiquitin like domain1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381656,932,142 - 56,932,202EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:13744 AgrOrtholog
COSMIC HERPUD1 COSMIC
Ensembl Genes ENSG00000051108 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000300302 ENTREZGENE
  ENST00000300302.9 UniProtKB/Swiss-Prot
  ENST00000344114.8 UniProtKB/Swiss-Prot
  ENST00000379792.6 UniProtKB/Swiss-Prot
  ENST00000439977 ENTREZGENE
  ENST00000439977.7 UniProtKB/Swiss-Prot
  ENST00000563343.5 UniProtKB/TrEMBL
  ENST00000563911.5 UniProtKB/TrEMBL
  ENST00000565966.5 UniProtKB/TrEMBL
  ENST00000568358.1 UniProtKB/TrEMBL
  ENST00000568651.1 UniProtKB/TrEMBL
  ENST00000569429.5 UniProtKB/TrEMBL
GTEx ENSG00000051108 GTEx
HGNC ID HGNC:13744 ENTREZGENE
Human Proteome Map HERPUD1 Human Proteome Map
InterPro HERPUD1/2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin-like_dom UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin_dom UniProtKB/Swiss-Prot
KEGG Report hsa:9709 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 9709 ENTREZGENE
OMIM 608070 OMIM
PANTHER HOMOCYSTEINE-RESPONSIVE ENDOPLASMIC RETICULUM-RESIDENT UBIQUITIN-LIKE DOMAIN MEMBER 1 PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12943 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ubiquitin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA29252 PharmGKB
PROSITE UBIQUITIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART UBQ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A2Z2EHH6 ENTREZGENE, UniProtKB/TrEMBL
  A4UAE9 ENTREZGENE, UniProtKB/TrEMBL
  A8K6A0 ENTREZGENE, UniProtKB/TrEMBL
  A8K7S3 ENTREZGENE, UniProtKB/TrEMBL
  E9PGD1 ENTREZGENE
  H3BP08_HUMAN UniProtKB/TrEMBL
  H3BQM2_HUMAN UniProtKB/TrEMBL
  H3BRS4_HUMAN UniProtKB/TrEMBL
  H3BTA8_HUMAN UniProtKB/TrEMBL
  H3BTT7_HUMAN UniProtKB/TrEMBL
  H3BV54_HUMAN UniProtKB/TrEMBL
  HERP1_HUMAN UniProtKB/Swiss-Prot
  O60644 ENTREZGENE
  Q15011 ENTREZGENE
  Q53FP9 ENTREZGENE, UniProtKB/TrEMBL
  Q6IAN8 ENTREZGENE
  Q96D92 ENTREZGENE
UniProt Secondary E9PGD1 UniProtKB/Swiss-Prot
  O60644 UniProtKB/Swiss-Prot
  Q6IAN8 UniProtKB/Swiss-Prot
  Q96D92 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-28 HERPUD1  homocysteine inducible ER protein with ubiquitin like domain 1  HERPUD1  homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1  Symbol and/or name change 5135510 APPROVED