PRSS12 (serine protease 12) - Rat Genome Database

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Gene: PRSS12 (serine protease 12) Homo sapiens
Analyze
Symbol: PRSS12
Name: serine protease 12
RGD ID: 733403
HGNC Page HGNC:9477
Description: Predicted to enable serine-type endopeptidase activity. Predicted to be involved in exocytosis and zymogen activation. Predicted to act upstream of or within proteolysis. Predicted to be located in axon. Predicted to be active in several cellular components, including dendrite; synaptic cleft; and terminal bouton. Implicated in autosomal recessive intellectual developmental disorder 1 and intellectual disability.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: brain-specific serine protease 3; BSSP-3; BSSP3; leydin; MGC12722; motopsin; MRT1; neurotrypsin; protease, serine 12; protease, serine, 12 (neurotrypsin, motopsin)
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384118,280,038 - 118,353,003 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4118,280,038 - 118,353,003 (-)EnsemblGRCh38hg38GRCh38
GRCh374119,201,193 - 119,274,158 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364119,421,865 - 119,493,370 (-)NCBINCBI36Build 36hg18NCBI36
Build 344119,560,019 - 119,631,525NCBI
Celera4116,492,317 - 116,565,055 (-)NCBICelera
Cytogenetic Map4q26NCBI
HuRef4114,936,619 - 115,009,040 (-)NCBIHuRef
CHM1_14119,177,431 - 119,250,161 (-)NCBICHM1_1
T2T-CHM13v2.04121,585,014 - 121,657,983 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
4,4'-sulfonyldiphenol  (ISO)
5-azacytidine  (EXP)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (EXP)
Aflatoxin B2 alpha  (EXP)
all-trans-retinoic acid  (EXP,ISO)
ammonium chloride  (ISO)
antirheumatic drug  (EXP)
aristolochic acid A  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (ISO)
Benzo[k]fluoranthene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
bucladesine  (EXP)
carbon nanotube  (ISO)
carmustine  (EXP)
chlorpyrifos  (ISO)
chrysene  (ISO)
cisplatin  (EXP)
copper(II) sulfate  (EXP)
Cuprizon  (ISO)
cyclosporin A  (EXP)
dexamethasone  (EXP)
dibenzo[a,l]pyrene  (ISO)
diiodine  (ISO)
dimethylarsinous acid  (EXP)
dorsomorphin  (EXP)
doxorubicin  (EXP)
entinostat  (EXP)
ethanol  (ISO)
gentamycin  (ISO)
indometacin  (EXP)
irinotecan  (ISO)
lead diacetate  (ISO)
medroxyprogesterone acetate  (EXP)
mercury dibromide  (EXP)
methylparaben  (EXP)
miconazole  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N-nitrosodiethylamine  (ISO)
nickel atom  (EXP)
ozone  (ISO)
panobinostat  (EXP)
paracetamol  (ISO)
phenethyl caffeate  (ISO)
phenylmercury acetate  (EXP)
phenytoin  (EXP)
potassium chromate  (EXP)
resveratrol  (EXP)
sarin  (EXP)
SB 431542  (EXP)
silicon dioxide  (EXP)
sodium arsenate  (ISO)
sodium arsenite  (EXP,ISO)
temozolomide  (EXP)
testosterone  (ISO)
tetraphene  (ISO)
trichloroethene  (ISO)
trichostatin A  (EXP)
valproic acid  (EXP)
vancomycin  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
exocytosis  (IEA,ISS)
proteolysis  (IEA,ISO)
zymogen activation  (IBA,IEA,ISO)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Neurotrypsin, a novel multidomain serine protease expressed in the nervous system. Gschwend TP, etal., Mol Cell Neurosci 1997;9(3):207-19.
3. Truncating neurotrypsin mutation in autosomal recessive nonsyndromic mental retardation. Molinari F, etal., Science 2002 Nov 29;298(5599):1779-81.
4. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
Additional References at PubMed
PMID:9540828   PMID:10103056   PMID:10343120   PMID:12477932   PMID:20332099   PMID:21873635   PMID:26496610   PMID:33961781   PMID:34732716   PMID:36609795  


Genomics

Comparative Map Data
PRSS12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384118,280,038 - 118,353,003 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4118,280,038 - 118,353,003 (-)EnsemblGRCh38hg38GRCh38
GRCh374119,201,193 - 119,274,158 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364119,421,865 - 119,493,370 (-)NCBINCBI36Build 36hg18NCBI36
Build 344119,560,019 - 119,631,525NCBI
Celera4116,492,317 - 116,565,055 (-)NCBICelera
Cytogenetic Map4q26NCBI
HuRef4114,936,619 - 115,009,040 (-)NCBIHuRef
CHM1_14119,177,431 - 119,250,161 (-)NCBICHM1_1
T2T-CHM13v2.04121,585,014 - 121,657,983 (-)NCBIT2T-CHM13v2.0
Prss12
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393123,240,562 - 123,300,251 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3123,240,562 - 123,300,246 (+)EnsemblGRCm39 Ensembl
GRCm383123,446,913 - 123,506,602 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3123,446,913 - 123,506,597 (+)EnsemblGRCm38mm10GRCm38
MGSCv373123,149,831 - 123,209,520 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363123,438,935 - 123,498,619 (+)NCBIMGSCv36mm8
Celera3129,878,310 - 129,935,827 (+)NCBICelera
Cytogenetic Map3G1NCBI
cM Map354.58NCBI
Prss12
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82214,308,695 - 214,368,679 (+)NCBIGRCr8
mRatBN7.22211,624,134 - 211,684,126 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2211,624,134 - 211,684,126 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2219,299,258 - 219,359,183 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02217,199,129 - 217,259,048 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02212,053,382 - 212,113,300 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02227,657,983 - 227,717,884 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2227,657,983 - 227,717,884 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02247,015,139 - 247,074,636 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42220,194,590 - 220,254,502 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12220,157,651 - 220,217,564 (+)NCBI
Celera2204,036,064 - 204,095,891 (+)NCBICelera
Cytogenetic Map2q42NCBI
Prss12
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542821,574,947 - 21,644,539 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542821,574,947 - 21,644,909 (+)NCBIChiLan1.0ChiLan1.0
PRSS12
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23116,316,460 - 116,391,208 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14116,613,235 - 116,687,963 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04110,727,731 - 110,801,258 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14121,279,868 - 121,352,783 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4121,279,868 - 121,353,151 (-)Ensemblpanpan1.1panPan2
PRSS12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13237,509,662 - 37,586,933 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3237,509,124 - 37,587,155 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha324,487,268 - 4,564,942 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03237,730,129 - 37,808,285 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3237,730,142 - 37,808,489 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13237,753,268 - 37,831,362 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03237,476,304 - 37,554,549 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0322,249,097 - 2,327,432 (+)NCBIUU_Cfam_GSD_1.0
Prss12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530167,819,767 - 67,846,476 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936869651,373 - 711,168 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PRSS12
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8105,121,529 - 105,197,141 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18105,121,529 - 105,197,142 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28112,836,262 - 112,911,646 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PRSS12
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1766,027,172 - 66,101,563 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl766,025,613 - 66,101,549 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603744,859,539 - 44,939,830 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Prss12
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248675,338,463 - 5,451,160 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248675,341,202 - 5,450,977 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PRSS12
194 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_003619.4(PRSS12):c.1355_1358del (p.Asp452fs) deletion Intellectual disability, autosomal recessive 1 [RCV000004317] Chr4:118313332..118313335 [GRCh38]
Chr4:119234487..119234490 [GRCh37]
Chr4:4q26
pathogenic
NM_003619.3(PRSS12):c.2039+2365G>A single nucleotide variant Lung cancer [RCV000094005] Chr4:118292574 [GRCh38]
Chr4:119213729 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.3(PRSS12):c.502+6794G>T single nucleotide variant Lung cancer [RCV000094006] Chr4:118345425 [GRCh38]
Chr4:119266580 [GRCh37]
Chr4:4q26
uncertain significance
GRCh38/hg38 4q26-35.2(chr4:118065569-190042639)x3 copy number gain See cases [RCV000051785] Chr4:118065569..190042639 [GRCh38]
Chr4:118986724..190828225 [GRCh37]
Chr4:119206172..191200788 [NCBI36]
Chr4:4q26-35.2
pathogenic
GRCh38/hg38 4q22.2-32.3(chr4:92913386-165299707)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051775]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051775]|See cases [RCV000051775] Chr4:92913386..165299707 [GRCh38]
Chr4:93834537..166220859 [GRCh37]
Chr4:94053560..166440309 [NCBI36]
Chr4:4q22.2-32.3
pathogenic
GRCh38/hg38 4q22.3-28.3(chr4:96092893-136410207)x3 copy number gain See cases [RCV000051776] Chr4:96092893..136410207 [GRCh38]
Chr4:97014044..137331362 [GRCh37]
Chr4:97233067..137550812 [NCBI36]
Chr4:4q22.3-28.3
pathogenic
GRCh38/hg38 4q26-31.21(chr4:116630862-145429900)x1 copy number loss See cases [RCV000053321] Chr4:116630862..145429900 [GRCh38]
Chr4:117552018..146351052 [GRCh37]
Chr4:117771466..146570502 [NCBI36]
Chr4:4q26-31.21
pathogenic
NM_003619.3(PRSS12):c.450C>T (p.Phe150=) single nucleotide variant Malignant melanoma [RCV000066260] Chr4:118352271 [GRCh38]
Chr4:119273426 [GRCh37]
Chr4:119492874 [NCBI36]
Chr4:4q26
not provided
NM_003619.3(PRSS12):c.667C>T (p.Pro223Ser) single nucleotide variant Malignant melanoma [RCV000060903] Chr4:118335626 [GRCh38]
Chr4:119256781 [GRCh37]
Chr4:119476229 [NCBI36]
Chr4:4q26
not provided
NM_003619.4(PRSS12):c.19G>A (p.Val7Met) single nucleotide variant Intellectual disability [RCV001256137]|not provided [RCV000118071]|not specified [RCV004019646] Chr4:118352702 [GRCh38]
Chr4:119273857 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2324G>A (p.Arg775Gln) single nucleotide variant not provided [RCV000118072] Chr4:118282240 [GRCh38]
Chr4:119203395 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1272T>G (p.Val424=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000337097]|PRSS12-related condition [RCV003964987]|not specified [RCV000118067] Chr4:118316202 [GRCh38]
Chr4:119237357 [GRCh37]
Chr4:4q26
benign|likely benign
NM_003619.4(PRSS12):c.1281A>G (p.Gln427=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000376373]|not specified [RCV000118068] Chr4:118316193 [GRCh38]
Chr4:119237348 [GRCh37]
Chr4:4q26
benign|likely benign
NM_003619.4(PRSS12):c.164G>C (p.Arg55Thr) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000398279]|not specified [RCV000118069] Chr4:118352557 [GRCh38]
Chr4:119273712 [GRCh37]
Chr4:4q26
benign
NM_003619.4(PRSS12):c.1816G>T (p.Ala606Ser) single nucleotide variant Intellectual Disability, Recessive [RCV000272402]|not provided [RCV001762243]|not specified [RCV000118070] Chr4:118298754 [GRCh38]
Chr4:119219909 [GRCh37]
Chr4:4q26
benign|likely benign
NM_003619.4(PRSS12):c.2389C>T (p.Arg797Cys) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV002498525]|not provided [RCV000973084]|not specified [RCV000118073] Chr4:118282175 [GRCh38]
Chr4:119203330 [GRCh37]
Chr4:4q26
likely benign|uncertain significance
NM_003619.4(PRSS12):c.2498G>A (p.Arg833Gln) single nucleotide variant Intellectual Disability, Recessive [RCV000313428]|not specified [RCV000118074] Chr4:118282066 [GRCh38]
Chr4:119203221 [GRCh37]
Chr4:4q26
benign|likely benign
NM_003619.4(PRSS12):c.910G>A (p.Val304Ile) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001333145] Chr4:118331777 [GRCh38]
Chr4:119252932 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1489_1489+1del deletion Mental retardation, autosomal recessive 1 [RCV001333143] Chr4:118313200..118313201 [GRCh38]
Chr4:119234355..119234356 [GRCh37]
Chr4:4q26
pathogenic
NM_003619.4(PRSS12):c.254C>A (p.Thr85Lys) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001333144] Chr4:118352467 [GRCh38]
Chr4:119273622 [GRCh37]
Chr4:4q26
uncertain significance
GRCh38/hg38 4q26(chr4:116090996-119545165)x1 copy number loss See cases [RCV000138236] Chr4:116090996..119545165 [GRCh38]
Chr4:117012152..120466320 [GRCh37]
Chr4:117231601..120685768 [NCBI36]
Chr4:4q26
likely pathogenic
GRCh38/hg38 4q26(chr4:117786007-118526099)x3 copy number gain See cases [RCV000142023] Chr4:117786007..118526099 [GRCh38]
Chr4:118707162..119447254 [GRCh37]
Chr4:118926610..119666702 [NCBI36]
Chr4:4q26
likely benign|uncertain significance
GRCh38/hg38 4q26-28.3(chr4:117351881-133565667)x1 copy number loss See cases [RCV000143207] Chr4:117351881..133565667 [GRCh38]
Chr4:118273037..134486822 [GRCh37]
Chr4:118492485..134706272 [NCBI36]
Chr4:4q26-28.3
pathogenic
NM_003619.4(PRSS12):c.380G>A (p.Trp127Ter) single nucleotide variant not specified [RCV000202652] Chr4:118352341 [GRCh38]
Chr4:119273496 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.51A>G (p.Glu17=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000307789]|not provided [RCV000963005]|not specified [RCV000192444] Chr4:118352670 [GRCh38]
Chr4:119273825 [GRCh37]
Chr4:4q26
benign|likely benign|uncertain significance
NM_003619.4(PRSS12):c.523G>A (p.Gly175Ser) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000764532]|PRSS12-related condition [RCV003927805]|not provided [RCV000969483]|not specified [RCV000193095] Chr4:118338294 [GRCh38]
Chr4:119259449 [GRCh37]
Chr4:4q26
likely benign|conflicting interpretations of pathogenicity|uncertain significance
NM_003619.4(PRSS12):c.1946G>A (p.Arg649Gln) single nucleotide variant not specified [RCV000193978] Chr4:118295032 [GRCh38]
Chr4:119216187 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.309G>C (p.Thr103=) single nucleotide variant not specified [RCV000194422] Chr4:118352412 [GRCh38]
Chr4:119273567 [GRCh37]
Chr4:4q26
likely benign|uncertain significance
NM_003619.4(PRSS12):c.2320+6G>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000273578]|not specified [RCV000194992] Chr4:118282825 [GRCh38]
Chr4:119203980 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1490-7G>A single nucleotide variant not provided [RCV000956249]|not specified [RCV000195283] Chr4:118308584 [GRCh38]
Chr4:119229739 [GRCh37]
Chr4:4q26
likely pathogenic|benign|likely benign
NM_003619.4(PRSS12):c.*1504G>A single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000262931] Chr4:118280432 [GRCh38]
Chr4:119201587 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.1492T>A (p.Phe498Ile) single nucleotide variant not specified [RCV000193316] Chr4:118308575 [GRCh38]
Chr4:119229730 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.243G>C (p.Gln81His) single nucleotide variant not specified [RCV000193387] Chr4:118352478 [GRCh38]
Chr4:119273633 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.907A>G (p.Thr303Ala) single nucleotide variant not specified [RCV000194498] Chr4:118331780 [GRCh38]
Chr4:119252935 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1516G>A (p.Glu506Lys) single nucleotide variant Long QT syndrome [RCV000190143] Chr4:118308551 [GRCh38]
Chr4:119229706 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.1270G>A (p.Val424Ile) single nucleotide variant not provided [RCV000224388] Chr4:118316204 [GRCh38]
Chr4:119237359 [GRCh37]
Chr4:4q26
benign|likely benign
NM_003619.4(PRSS12):c.669G>A (p.Pro223=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000278554] Chr4:118335624 [GRCh38]
Chr4:119256779 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1277G>A (p.Arg426Gln) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000284295] Chr4:118316197 [GRCh38]
Chr4:119237352 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*672C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000275571] Chr4:118281264 [GRCh38]
Chr4:119202419 [GRCh37]
Chr4:4q26
benign|likely benign
NM_003619.4(PRSS12):c.1640C>A (p.Ala547Asp) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000266663]|not specified [RCV004021938] Chr4:118298930 [GRCh38]
Chr4:119220085 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.315C>T (p.Phe105=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000352197] Chr4:118352406 [GRCh38]
Chr4:119273561 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*208C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000300164] Chr4:118281728 [GRCh38]
Chr4:119202883 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.*807G>A single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000333954] Chr4:118281129 [GRCh38]
Chr4:119202284 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.511C>T (p.Arg171Ter) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000398832] Chr4:118338306 [GRCh38]
Chr4:119259461 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*920G>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000315751] Chr4:118281016 [GRCh38]
Chr4:119202171 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1558_*1559del deletion Intellectual Disability, Recessive [RCV000355255] Chr4:118280377..118280378 [GRCh38]
Chr4:119201532..119201533 [GRCh37]
Chr4:4q26
benign
NM_003619.4(PRSS12):c.*221A>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000400420] Chr4:118281715 [GRCh38]
Chr4:119202870 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*260CCTA[1] microsatellite Intellectual Disability, Recessive [RCV000378986] Chr4:118281669..118281672 [GRCh38]
Chr4:119202824..119202827 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1615C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000302730] Chr4:118280321 [GRCh38]
Chr4:119201476 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1865T>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000304058] Chr4:118280071 [GRCh38]
Chr4:119201226 [GRCh37]
Chr4:4q26
likely benign|uncertain significance
NM_003619.4(PRSS12):c.1773C>T (p.His591=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000381989]|PRSS12-related condition [RCV003932411]|not provided [RCV000956248] Chr4:118298797 [GRCh38]
Chr4:119219952 [GRCh37]
Chr4:4q26
benign|likely benign
NM_003619.4(PRSS12):c.2535C>T (p.Ser845=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000408067]|not provided [RCV000906827] Chr4:118282029 [GRCh38]
Chr4:119203184 [GRCh37]
Chr4:4q26
benign|uncertain significance
NM_003619.4(PRSS12):c.*764A>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000386185] Chr4:118281172 [GRCh38]
Chr4:119202327 [GRCh37]
Chr4:4q26
likely benign|uncertain significance
NM_003619.4(PRSS12):c.2034C>G (p.Phe678Leu) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000364430] Chr4:118294944 [GRCh38]
Chr4:119216099 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1660T>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000391749] Chr4:118280276 [GRCh38]
Chr4:119201431 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.480G>C (p.Trp160Cys) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000311419] Chr4:118352241 [GRCh38]
Chr4:119273396 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2460C>T (p.Ser820=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000370389] Chr4:118282104 [GRCh38]
Chr4:119203259 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2088T>C (p.His696=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000312348] Chr4:118283063 [GRCh38]
Chr4:119204218 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.820+3dup duplication Intellectual Disability, Recessive [RCV000375329] Chr4:118335462..118335463 [GRCh38]
Chr4:119256617..119256618 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.*830C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000276685] Chr4:118281106 [GRCh38]
Chr4:119202261 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.343G>A (p.Val115Met) single nucleotide variant not specified [RCV004326328] Chr4:118352378 [GRCh38]
Chr4:119273533 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*278T>A single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000345316] Chr4:118281658 [GRCh38]
Chr4:119202813 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1615C>T (p.Arg539Cys) single nucleotide variant not specified [RCV004285916] Chr4:118308452 [GRCh38]
Chr4:119229607 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*531C>A single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000385282] Chr4:118281405 [GRCh38]
Chr4:119202560 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.-57T>C single nucleotide variant Intellectual Disability, Recessive [RCV000358261] Chr4:118352777 [GRCh38]
Chr4:119273932 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.*260C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000287306] Chr4:118281676 [GRCh38]
Chr4:119202831 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1512T>C (p.Asp504=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000324208] Chr4:118308555 [GRCh38]
Chr4:119229710 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*73GA[1] microsatellite Intellectual Disability, Recessive [RCV000338638] Chr4:118281860..118281861 [GRCh38]
Chr4:119203015..119203016 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*842C>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000355037] Chr4:118281094 [GRCh38]
Chr4:119202249 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1788A>T (p.Gly596=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000325084] Chr4:118298782 [GRCh38]
Chr4:119219937 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*233G>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000339960] Chr4:118281703 [GRCh38]
Chr4:119202858 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*526T>A single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000288587] Chr4:118281410 [GRCh38]
Chr4:119202565 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*583del deletion Intellectual Disability, Recessive [RCV000328319] Chr4:118281353 [GRCh38]
Chr4:119202508 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1699T>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000361213] Chr4:118280237 [GRCh38]
Chr4:119201392 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:12440-190904441)x3 copy number gain See cases [RCV000446653] Chr4:12440..190904441 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
NM_003619.4(PRSS12):c.1357G>A (p.Val453Ile) single nucleotide variant not specified [RCV000500943] Chr4:118313333 [GRCh38]
Chr4:119234488 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.936C>T (p.Ala312=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001149080]|not specified [RCV000501149] Chr4:118331751 [GRCh38]
Chr4:119252906 [GRCh37]
Chr4:4q26
likely benign|uncertain significance
NM_003619.4(PRSS12):c.428G>A (p.Gly143Asp) single nucleotide variant not specified [RCV000503671] Chr4:118352293 [GRCh38]
Chr4:119273448 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.772G>A (p.Val258Met) single nucleotide variant not specified [RCV000501699] Chr4:118335521 [GRCh38]
Chr4:119256676 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2376G>A (p.Arg792=) single nucleotide variant not provided [RCV000918544]|not specified [RCV000504125] Chr4:118282188 [GRCh38]
Chr4:119203343 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.817C>G (p.His273Asp) single nucleotide variant not specified [RCV000501905] Chr4:118335476 [GRCh38]
Chr4:119256631 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2128dup (p.Gln710fs) duplication Intellectual disability, autosomal recessive 1 [RCV002481624]|not specified [RCV000499463] Chr4:118283022..118283023 [GRCh38]
Chr4:119204177..119204178 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1917-9del deletion not specified [RCV000504323] Chr4:118295070 [GRCh38]
Chr4:119216225 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.977T>C (p.Ile326Thr) single nucleotide variant not specified [RCV000504531] Chr4:118318551 [GRCh38]
Chr4:119239706 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.37G>A (p.Gly13Arg) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000509461]|not specified [RCV003479146] Chr4:118352684 [GRCh38]
Chr4:119273839 [GRCh37]
Chr4:4q26
uncertain significance|not provided
NM_003619.4(PRSS12):c.323C>G (p.Pro108Arg) single nucleotide variant not provided [RCV000883173]|not specified [RCV000499906] Chr4:118352398 [GRCh38]
Chr4:119273553 [GRCh37]
Chr4:4q26
likely benign|uncertain significance
NM_003619.4(PRSS12):c.2147G>A (p.Arg716Gln) single nucleotide variant not specified [RCV000500179] Chr4:118283004 [GRCh38]
Chr4:119204159 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2054C>T (p.Thr685Ile) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001270052]|not specified [RCV000502562] Chr4:118283097 [GRCh38]
Chr4:119204252 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:68346-190957473) copy number gain See cases [RCV000510453] Chr4:68346..190957473 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
NM_003619.4(PRSS12):c.997G>A (p.Ala333Thr) single nucleotide variant not specified [RCV000502774] Chr4:118318531 [GRCh38]
Chr4:119239686 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1746A>G (p.Gln582=) single nucleotide variant not specified [RCV000502799] Chr4:118298824 [GRCh38]
Chr4:119219979 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.804G>A (p.Thr268=) single nucleotide variant not specified [RCV000502916] Chr4:118335489 [GRCh38]
Chr4:119256644 [GRCh37]
Chr4:4q26
likely benign
GRCh37/hg19 4q25-35.2(chr4:109199664-189752726)x3 copy number gain See cases [RCV000511945] Chr4:109199664..189752726 [GRCh37]
Chr4:4q25-35.2
pathogenic
GRCh37/hg19 4q22.1-35.2(chr4:93071152-190957473)x3 copy number gain See cases [RCV000510970] Chr4:93071152..190957473 [GRCh37]
Chr4:4q22.1-35.2
pathogenic
NM_003619.4(PRSS12):c.2216G>A (p.Cys739Tyr) single nucleotide variant not specified [RCV004316849] Chr4:118282935 [GRCh38]
Chr4:119204090 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.28C>G (p.Leu10Val) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001146301]|not provided [RCV000514704]|not specified [RCV001821443] Chr4:118352693 [GRCh38]
Chr4:119273848 [GRCh37]
Chr4:4q26
benign|likely benign
NM_003619.4(PRSS12):c.598G>A (p.Asp200Asn) single nucleotide variant not specified [RCV004313401] Chr4:118338219 [GRCh38]
Chr4:119259374 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:68346-190957473)x3 copy number gain See cases [RCV000512241] Chr4:68346..190957473 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4q26-28.2(chr4:116307857-129302960)x1 copy number loss not provided [RCV000682448] Chr4:116307857..129302960 [GRCh37]
Chr4:4q26-28.2
pathogenic
GRCh37/hg19 4q26(chr4:117108352-120317108)x1 copy number loss not provided [RCV000682449] Chr4:117108352..120317108 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4q26(chr4:119114102-119543843)x3 copy number gain not provided [RCV000682451] Chr4:119114102..119543843 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:49450-190915650)x3 copy number gain not provided [RCV000743155] Chr4:49450..190915650 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:49450-190963766)x3 copy number gain not provided [RCV000743156] Chr4:49450..190963766 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:11525-191028879)x3 copy number gain not provided [RCV000743147] Chr4:11525..191028879 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
NM_003619.4(PRSS12):c.1195C>T (p.Arg399Cys) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001149077] Chr4:118316279 [GRCh38]
Chr4:119237434 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.48C>T (p.Pro16=) single nucleotide variant not provided [RCV000929479] Chr4:118352673 [GRCh38]
Chr4:119273828 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.440C>T (p.Pro147Leu) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144492]|not provided [RCV000968042] Chr4:118352281 [GRCh38]
Chr4:119273436 [GRCh37]
Chr4:4q26
benign|likely benign
NM_003619.4(PRSS12):c.2488_2489del (p.Met830fs) deletion Intellectual disability, autosomal recessive 1 [RCV000779425]|not provided [RCV000940573] Chr4:118282075..118282076 [GRCh38]
Chr4:119203230..119203231 [GRCh37]
Chr4:4q26
likely benign|conflicting interpretations of pathogenicity|uncertain significance
NM_003619.4(PRSS12):c.1837+1G>A single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000779426] Chr4:118298732 [GRCh38]
Chr4:119219887 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1395T>A (p.Cys465Ter) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000779427] Chr4:118313295 [GRCh38]
Chr4:119234450 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.781C>T (p.Gln261Ter) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000779428] Chr4:118335512 [GRCh38]
Chr4:119256667 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.645A>G (p.Gly215=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150582]|not provided [RCV000893645] Chr4:118335648 [GRCh38]
Chr4:119256803 [GRCh37]
Chr4:4q26
benign|likely benign
NM_003619.4(PRSS12):c.1368A>G (p.Ser456=) single nucleotide variant not provided [RCV000975968] Chr4:118313322 [GRCh38]
Chr4:119234477 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.1879C>T (p.Arg627Trp) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV000784959] Chr4:118295815 [GRCh38]
Chr4:119216970 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*800G>A single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001146053] Chr4:118281136 [GRCh38]
Chr4:119202291 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1490-15T>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001146172] Chr4:118308592 [GRCh38]
Chr4:119229747 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*263A>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001148959] Chr4:118281673 [GRCh38]
Chr4:119202828 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2568T>A (p.Pro856=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001148960] Chr4:118281996 [GRCh38]
Chr4:119203151 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1141T>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150356] Chr4:118280795 [GRCh38]
Chr4:119201950 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2149G>C (p.Glu717Gln) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150470]|not specified [RCV004032785] Chr4:118283002 [GRCh38]
Chr4:119204157 [GRCh37]
Chr4:4q26
uncertain significance
Single allele deletion Neurodevelopmental disorder [RCV000787448] Chr4:116624547..126168646 [GRCh37]
Chr4:4q26-28.1
likely pathogenic
NM_003619.4(PRSS12):c.*1595A>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001148824] Chr4:118280341 [GRCh38]
Chr4:119201496 [GRCh37]
Chr4:4q26
benign
NM_003619.4(PRSS12):c.2503G>A (p.Gly835Arg) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150467] Chr4:118282061 [GRCh38]
Chr4:119203216 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1722G>A (p.Arg574=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001146171] Chr4:118298848 [GRCh38]
Chr4:119220003 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1413_1416dup (p.His473fs) duplication not provided [RCV001090889]|not specified [RCV003235466] Chr4:118313273..118313274 [GRCh38]
Chr4:119234428..119234429 [GRCh37]
Chr4:4q26
likely pathogenic|uncertain significance
NM_003619.4(PRSS12):c.718C>T (p.Arg240Ter) single nucleotide variant not specified [RCV003317844] Chr4:118335575 [GRCh38]
Chr4:119256730 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1499A>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150352] Chr4:118280437 [GRCh38]
Chr4:119201592 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.890A>G (p.His297Arg) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150580] Chr4:118331797 [GRCh38]
Chr4:119252952 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2050A>G (p.Ser684Gly) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144379] Chr4:118283101 [GRCh38]
Chr4:119204256 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*604A>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001146055] Chr4:118281332 [GRCh38]
Chr4:119202487 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*574A>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001146056] Chr4:118281362 [GRCh38]
Chr4:119202517 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1381A>G (p.Arg461Gly) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001146173] Chr4:118313309 [GRCh38]
Chr4:119234464 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.-10C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001146302] Chr4:118352730 [GRCh38]
Chr4:119273885 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.1630A>G (p.Lys544Glu) single nucleotide variant not specified [RCV004326390] Chr4:118308437 [GRCh38]
Chr4:119229592 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1397C>A (p.Ser466Tyr) single nucleotide variant not specified [RCV004310417] Chr4:118313293 [GRCh38]
Chr4:119234448 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1144C>T (p.Leu382=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001149078]|PRSS12-related condition [RCV003940707]|not provided [RCV000892211] Chr4:118318384 [GRCh38]
Chr4:119239539 [GRCh37]
Chr4:4q26
benign
NM_003619.4(PRSS12):c.876G>A (p.Arg292=) single nucleotide variant not provided [RCV000929938] Chr4:118331811 [GRCh38]
Chr4:119252966 [GRCh37]
Chr4:4q26
benign
NM_003619.4(PRSS12):c.2250T>C (p.Cys750=) single nucleotide variant not provided [RCV000931283] Chr4:118282901 [GRCh38]
Chr4:119204056 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.936C>G (p.Ala312=) single nucleotide variant not provided [RCV000916272] Chr4:118331751 [GRCh38]
Chr4:119252906 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.2073G>A (p.Arg691=) single nucleotide variant not provided [RCV000929994] Chr4:118283078 [GRCh38]
Chr4:119204233 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.1903A>G (p.Lys635Glu) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144384] Chr4:118295791 [GRCh38]
Chr4:119216946 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.195C>T (p.Phe65=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144495] Chr4:118352526 [GRCh38]
Chr4:119273681 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1577A>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001148825] Chr4:118280359 [GRCh38]
Chr4:119201514 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.918T>G (p.Asp306Glu) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001149081] Chr4:118331769 [GRCh38]
Chr4:119252924 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*906A>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144266] Chr4:118281030 [GRCh38]
Chr4:119202185 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*849C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144268] Chr4:118281087 [GRCh38]
Chr4:119202242 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*839T>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144269] Chr4:118281097 [GRCh38]
Chr4:119202252 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.966C>T (p.Gly322=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001149079]|not provided [RCV000911652] Chr4:118331721 [GRCh38]
Chr4:119252876 [GRCh37]
Chr4:4q26
benign|likely benign|uncertain significance
NM_003619.4(PRSS12):c.*912G>A single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144265] Chr4:118281024 [GRCh38]
Chr4:119202179 [GRCh37]
Chr4:4q26
benign
NM_003619.4(PRSS12):c.*1573G>A single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150351] Chr4:118280363 [GRCh38]
Chr4:119201518 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*904A>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144267] Chr4:118281032 [GRCh38]
Chr4:119202187 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.821-12C>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150581] Chr4:118331878 [GRCh38]
Chr4:119253033 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.518G>A (p.Arg173His) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150584] Chr4:118338299 [GRCh38]
Chr4:119259454 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.274G>C (p.Gly92Arg) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144494] Chr4:118352447 [GRCh38]
Chr4:119273602 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.177G>A (p.Pro59=) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144496] Chr4:118352544 [GRCh38]
Chr4:119273699 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1435A>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150353] Chr4:118280501 [GRCh38]
Chr4:119201656 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1431C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150354] Chr4:118280505 [GRCh38]
Chr4:119201660 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2179A>G (p.Ile727Val) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150468] Chr4:118282972 [GRCh38]
Chr4:119204127 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1293-10A>G single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001146174] Chr4:118313407 [GRCh38]
Chr4:119234562 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1975C>T (p.Leu659Phe) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144380] Chr4:118295003 [GRCh38]
Chr4:119216158 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1916+11C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144383] Chr4:118295767 [GRCh38]
Chr4:119216922 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1974G>T (p.Arg658Ser) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144381] Chr4:118295004 [GRCh38]
Chr4:119216159 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1917-4T>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144382] Chr4:118295065 [GRCh38]
Chr4:119216220 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.365C>T (p.Ser122Leu) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001144493] Chr4:118352356 [GRCh38]
Chr4:119273511 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*658C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001146054] Chr4:118281278 [GRCh38]
Chr4:119202433 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*1143C>T single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150355] Chr4:118280793 [GRCh38]
Chr4:119201948 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.*950A>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150357] Chr4:118280986 [GRCh38]
Chr4:119202141 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2173T>C (p.Tyr725His) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150469] Chr4:118282978 [GRCh38]
Chr4:119204133 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.916G>A (p.Asp306Asn) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150579] Chr4:118331771 [GRCh38]
Chr4:119252926 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.524G>A (p.Gly175Asp) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001150583] Chr4:118338293 [GRCh38]
Chr4:119259448 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4q26(chr4:119130975-119516973)x3 copy number gain not provided [RCV001259307] Chr4:119130975..119516973 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.121C>T (p.Pro41Ser) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001331085] Chr4:118352600 [GRCh38]
Chr4:119273755 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4q26-28.2(chr4:116833638-130232122) copy number loss Atypical behavior [RCV001352657] Chr4:116833638..130232122 [GRCh37]
Chr4:4q26-28.2
pathogenic
NM_003619.4(PRSS12):c.1238A>G (p.Asp413Gly) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001333142]|PRSS12-related condition [RCV003963222] Chr4:118316236 [GRCh38]
Chr4:119237391 [GRCh37]
Chr4:4q26
likely benign|uncertain significance
NM_003619.4(PRSS12):c.2257C>G (p.Leu753Val) single nucleotide variant Mental retardation, autosomal recessive 1 [RCV001331087] Chr4:118282894 [GRCh38]
Chr4:119204049 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2040-1G>C single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001331086] Chr4:118283112 [GRCh38]
Chr4:119204267 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.235G>C (p.Ala79Pro) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV001331088]|not specified [RCV004035710] Chr4:118352486 [GRCh38]
Chr4:119273641 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.669G>T (p.Pro223=) single nucleotide variant not provided [RCV001531411] Chr4:118335624 [GRCh38]
Chr4:119256779 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.1435G>A (p.Glu479Lys) single nucleotide variant not provided [RCV001728158]|not specified [RCV004040015] Chr4:118313255 [GRCh38]
Chr4:119234410 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4q26-28.3(chr4:114872547-138005267)x1 copy number loss not provided [RCV001795851] Chr4:114872547..138005267 [GRCh37]
Chr4:4q26-28.3
pathogenic
NM_003619.4(PRSS12):c.821-1G>A single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV002482353]|not specified [RCV001817150] Chr4:118331867 [GRCh38]
Chr4:119253022 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.192_193dup (p.Phe65fs) duplication not specified [RCV001817701] Chr4:118352527..118352528 [GRCh38]
Chr4:119273682..119273683 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2588C>T (p.Ser863Leu) single nucleotide variant not specified [RCV001817172] Chr4:118281976 [GRCh38]
Chr4:119203131 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2146C>T (p.Arg716Trp) single nucleotide variant not specified [RCV001817531] Chr4:118283005 [GRCh38]
Chr4:119204160 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.537T>C (p.Phe179=) single nucleotide variant not specified [RCV001817593] Chr4:118338280 [GRCh38]
Chr4:119259435 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.2415A>C (p.Arg805Ser) single nucleotide variant not specified [RCV001819483] Chr4:118282149 [GRCh38]
Chr4:119203304 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4q24-31.21(chr4:104715235-145252595) copy number gain not specified [RCV002053446] Chr4:104715235..145252595 [GRCh37]
Chr4:4q24-31.21
pathogenic
GRCh37/hg19 4q26-28.2(chr4:116888785-129649979) copy number loss not specified [RCV002053451] Chr4:116888785..129649979 [GRCh37]
Chr4:4q26-28.2
pathogenic
GRCh37/hg19 4q12-31.21(chr4:52866944-143582507)x3 copy number gain not provided [RCV001827738] Chr4:52866944..143582507 [GRCh37]
Chr4:4q12-31.21
pathogenic
NM_003619.4(PRSS12):c.441_442del (p.Trp148fs) deletion Intellectual disability, autosomal recessive 1 [RCV002221895]   likely pathogenic
NM_003619.4(PRSS12):c.2613T>C (p.Ser871=) single nucleotide variant not specified [RCV004062939] Chr4:118281951 [GRCh38]
Chr4:119203106 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.2502C>T (p.Pro834=) single nucleotide variant not specified [RCV004062028] Chr4:118282062 [GRCh38]
Chr4:119203217 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.419G>C (p.Ser140Thr) single nucleotide variant not specified [RCV004113660] Chr4:118352302 [GRCh38]
Chr4:119273457 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.142C>A (p.Pro48Thr) single nucleotide variant not specified [RCV004143304] Chr4:118352579 [GRCh38]
Chr4:119273734 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1286G>A (p.Gly429Glu) single nucleotide variant not specified [RCV004136739] Chr4:118316188 [GRCh38]
Chr4:119237343 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.913T>C (p.Cys305Arg) single nucleotide variant not specified [RCV004134281] Chr4:118331774 [GRCh38]
Chr4:119252929 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1919G>C (p.Gly640Ala) single nucleotide variant not specified [RCV004217029] Chr4:118295059 [GRCh38]
Chr4:119216214 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1697A>C (p.Asn566Thr) single nucleotide variant not specified [RCV004144290] Chr4:118298873 [GRCh38]
Chr4:119220028 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.925T>C (p.Trp309Arg) single nucleotide variant not specified [RCV004180194] Chr4:118331762 [GRCh38]
Chr4:119252917 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.595T>G (p.Trp199Gly) single nucleotide variant not specified [RCV004233472] Chr4:118338222 [GRCh38]
Chr4:119259377 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2020G>T (p.Ala674Ser) single nucleotide variant not specified [RCV004225218] Chr4:118294958 [GRCh38]
Chr4:119216113 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1432C>T (p.Arg478Cys) single nucleotide variant not specified [RCV004172586] Chr4:118313258 [GRCh38]
Chr4:119234413 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.450C>A (p.Phe150Leu) single nucleotide variant not specified [RCV003479487] Chr4:118352271 [GRCh38]
Chr4:119273426 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2595T>G (p.Phe865Leu) single nucleotide variant not specified [RCV004172536] Chr4:118281969 [GRCh38]
Chr4:119203124 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2050A>C (p.Ser684Arg) single nucleotide variant not specified [RCV004180331] Chr4:118283101 [GRCh38]
Chr4:119204256 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2401C>T (p.Arg801Trp) single nucleotide variant not specified [RCV004169977] Chr4:118282163 [GRCh38]
Chr4:119203318 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.332G>T (p.Arg111Leu) single nucleotide variant not specified [RCV004195480] Chr4:118352389 [GRCh38]
Chr4:119273544 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1634G>T (p.Gly545Val) single nucleotide variant not specified [RCV004127429] Chr4:118298936 [GRCh38]
Chr4:119220091 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2534C>T (p.Ser845Phe) single nucleotide variant not specified [RCV004180413] Chr4:118282030 [GRCh38]
Chr4:119203185 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.713G>A (p.Arg238His) single nucleotide variant not specified [RCV004094378] Chr4:118335580 [GRCh38]
Chr4:119256735 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2116G>T (p.Glu706Ter) single nucleotide variant not specified [RCV003155875] Chr4:118283035 [GRCh38]
Chr4:119204190 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1501A>T (p.Arg501Ter) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV003228761] Chr4:118308566 [GRCh38]
Chr4:119229721 [GRCh37]
Chr4:4q26
likely pathogenic
NM_003619.4(PRSS12):c.2492G>T (p.Cys831Phe) single nucleotide variant not specified [RCV004269922] Chr4:118282072 [GRCh38]
Chr4:119203227 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2108T>G (p.Phe703Cys) single nucleotide variant not specified [RCV004268029] Chr4:118283043 [GRCh38]
Chr4:119204198 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2268_2274delinsAC (p.Arg757fs) indel Intellectual disability, autosomal recessive 1 [RCV003135151] Chr4:118282877..118282883 [GRCh38]
Chr4:119204032..119204038 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1918G>C (p.Gly640Arg) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV003135152] Chr4:118295060 [GRCh38]
Chr4:119216215 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.73C>G (p.Leu25Val) single nucleotide variant not specified [RCV004268305] Chr4:118352648 [GRCh38]
Chr4:119273803 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2164C>T (p.Arg722Cys) single nucleotide variant not specified [RCV004264519] Chr4:118282987 [GRCh38]
Chr4:119204142 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.359A>C (p.Glu120Ala) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV003225604]|not specified [RCV004285607] Chr4:118352362 [GRCh38]
Chr4:119273517 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.826A>G (p.Thr276Ala) single nucleotide variant not specified [RCV004323265] Chr4:118331861 [GRCh38]
Chr4:119253016 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.2450G>A (p.Arg817His) single nucleotide variant not specified [RCV004328234] Chr4:118282114 [GRCh38]
Chr4:119203269 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.113C>T (p.Pro38Leu) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV003330252] Chr4:118352608 [GRCh38]
Chr4:119273763 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.591C>A (p.Ser197Arg) single nucleotide variant not specified [RCV004350627] Chr4:118338226 [GRCh38]
Chr4:119259381 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2552G>T (p.Gly851Val) single nucleotide variant not specified [RCV004338673] Chr4:118282012 [GRCh38]
Chr4:119203167 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1615C>A (p.Arg539Ser) single nucleotide variant not specified [RCV004352773] Chr4:118308452 [GRCh38]
Chr4:119229607 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2525G>A (p.Gly842Glu) single nucleotide variant not specified [RCV004347948] Chr4:118282039 [GRCh38]
Chr4:119203194 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2236G>A (p.Val746Ile) single nucleotide variant not specified [RCV004355710] Chr4:118282915 [GRCh38]
Chr4:119204070 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2527G>A (p.Val843Met) single nucleotide variant not specified [RCV004347065] Chr4:118282037 [GRCh38]
Chr4:119203192 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.818A>G (p.His273Arg) single nucleotide variant not specified [RCV004335777] Chr4:118335475 [GRCh38]
Chr4:119256630 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.1843C>T (p.Leu615Phe) single nucleotide variant not specified [RCV003479912] Chr4:118295851 [GRCh38]
Chr4:119217006 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4q26-32.3(chr4:117518683-168174703)x3 copy number gain not provided [RCV003484198] Chr4:117518683..168174703 [GRCh37]
Chr4:4q26-32.3
pathogenic
NM_003619.4(PRSS12):c.1888C>T (p.Arg630Trp) single nucleotide variant not specified [RCV003479772] Chr4:118295806 [GRCh38]
Chr4:119216961 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1917-1G>C single nucleotide variant not specified [RCV003404950] Chr4:118295062 [GRCh38]
Chr4:119216217 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1402C>T (p.Arg468Ter) single nucleotide variant Intellectual disability, autosomal recessive 1 [RCV003486210] Chr4:118313288 [GRCh38]
Chr4:119234443 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.19G>C (p.Val7Leu) single nucleotide variant not specified [RCV004510618] Chr4:118352702 [GRCh38]
Chr4:119273857 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2390G>A (p.Arg797His) single nucleotide variant not specified [RCV004510623] Chr4:118282174 [GRCh38]
Chr4:119203329 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.340G>A (p.Glu114Lys) single nucleotide variant not specified [RCV004510626] Chr4:118352381 [GRCh38]
Chr4:119273536 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.940G>T (p.Ala314Ser) single nucleotide variant not specified [RCV004510630] Chr4:118331747 [GRCh38]
Chr4:119252902 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.986C>T (p.Ala329Val) single nucleotide variant not specified [RCV004510631] Chr4:118318542 [GRCh38]
Chr4:119239697 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1139C>T (p.Thr380Ile) single nucleotide variant not specified [RCV004510615] Chr4:118318389 [GRCh38]
Chr4:119239544 [GRCh37]
Chr4:4q26
uncertain significance
GRCh37/hg19 4q24-35.2(chr4:101203509-190957473)x3 copy number gain not specified [RCV003986496] Chr4:101203509..190957473 [GRCh37]
Chr4:4q24-35.2
pathogenic
NM_003619.4(PRSS12):c.2069T>A (p.Val690Asp) single nucleotide variant not specified [RCV004510619] Chr4:118283082 [GRCh38]
Chr4:119204237 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2098C>T (p.Pro700Ser) single nucleotide variant not specified [RCV004510621] Chr4:118283053 [GRCh38]
Chr4:119204208 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.874C>T (p.Arg292Trp) single nucleotide variant not specified [RCV004510629] Chr4:118331813 [GRCh38]
Chr4:119252968 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1987G>T (p.Ala663Ser) single nucleotide variant not specified [RCV004510616] Chr4:118294991 [GRCh38]
Chr4:119216146 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.1356C>T (p.Asp452=) single nucleotide variant PRSS12-related condition [RCV003977208] Chr4:118313334 [GRCh38]
Chr4:119234489 [GRCh37]
Chr4:4q26
likely benign
GRCh37/hg19 4p12-q35.2(chr4:45455621-191003541)x3 copy number gain not provided [RCV003885507] Chr4:45455621..191003541 [GRCh37]
Chr4:4p12-q35.2
pathogenic
NM_003619.4(PRSS12):c.206C>T (p.Pro69Leu) single nucleotide variant not specified [RCV004510620] Chr4:118352515 [GRCh38]
Chr4:119273670 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2497C>T (p.Arg833Trp) single nucleotide variant not specified [RCV004510625] Chr4:118282067 [GRCh38]
Chr4:119203222 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.557A>G (p.Tyr186Cys) single nucleotide variant not specified [RCV004510628] Chr4:118338260 [GRCh38]
Chr4:119259415 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.180G>C (p.Pro60=) single nucleotide variant PRSS12-related condition [RCV003927400] Chr4:118352541 [GRCh38]
Chr4:119273696 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.2483C>T (p.Pro828Leu) single nucleotide variant not specified [RCV004510624] Chr4:118282081 [GRCh38]
Chr4:119203236 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.368C>T (p.Pro123Leu) single nucleotide variant not specified [RCV004510627] Chr4:118352353 [GRCh38]
Chr4:119273508 [GRCh37]
Chr4:4q26
uncertain significance
NM_003619.4(PRSS12):c.2127T>A (p.Val709=) single nucleotide variant not provided [RCV003884306] Chr4:118283024 [GRCh38]
Chr4:119204179 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.1266C>T (p.Tyr422=) single nucleotide variant PRSS12-related condition [RCV003957000] Chr4:118316208 [GRCh38]
Chr4:119237363 [GRCh37]
Chr4:4q26
likely benign
NM_003619.4(PRSS12):c.1278A>G (p.Arg426=) single nucleotide variant PRSS12-related condition [RCV003912089] Chr4:118316196 [GRCh38]
Chr4:119237351 [GRCh37]
Chr4:4q26
likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:959
Count of miRNA genes:662
Interacting mature miRNAs:740
Transcripts:ENST00000296498, ENST00000503043, ENST00000510903, ENST00000515089
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SHGC-147288  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh374119,256,775 - 119,257,063UniSTSGRCh37
Build 364119,476,223 - 119,476,511RGDNCBI36
Celera4116,547,904 - 116,548,192RGD
Cytogenetic Map4q28.1UniSTS
HuRef4114,991,863 - 114,992,151UniSTS
D4S597  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh374119,226,228 - 119,226,449UniSTSGRCh37
Build 364119,445,676 - 119,445,897RGDNCBI36
Celera4116,517,352 - 116,517,573RGD
Cytogenetic Map4q28.1UniSTS
HuRef4114,961,306 - 114,961,527UniSTS
TNG Radiation Hybrid Map474186.0UniSTS
SHGC-59624  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh374119,201,268 - 119,201,412UniSTSGRCh37
Build 364119,420,716 - 119,420,860RGDNCBI36
Celera4116,492,392 - 116,492,536RGD
Cytogenetic Map4q26UniSTS
Cytogenetic Map4q28.1UniSTS
HuRef4114,936,694 - 114,936,838UniSTS
GeneMap99-GB4 RH Map4541.04UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 326 14 15 56 11 456 19 72 25 658 305 9 4 229 2
Low 1513 130 792 267 236 116 2091 572 2180 215 611 952 161 718 1013 2
Below cutoff 595 2568 872 305 1315 303 1754 1507 1463 151 184 336 5 1 482 1493 1

Sequence


RefSeq Acc Id: ENST00000296498   ⟹   ENSP00000296498
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4118,280,038 - 118,353,003 (-)Ensembl
RefSeq Acc Id: ENST00000503043
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4118,312,946 - 118,318,555 (-)Ensembl
RefSeq Acc Id: ENST00000510903
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4118,282,939 - 118,298,775 (-)Ensembl
RefSeq Acc Id: ENST00000515089
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4118,303,278 - 118,313,276 (-)Ensembl
RefSeq Acc Id: NM_003619   ⟹   NP_003610
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh384118,280,038 - 118,353,003 (-)NCBI
GRCh374119,201,193 - 119,274,053 (-)NCBI
Build 364119,421,865 - 119,493,370 (-)NCBI Archive
Celera4116,492,317 - 116,565,055 (-)RGD
HuRef4114,936,619 - 115,009,040 (-)RGD
CHM1_14119,177,431 - 119,250,161 (-)NCBI
T2T-CHM13v2.04121,585,014 - 121,657,983 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005263318   ⟹   XP_005263375
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh384118,303,701 - 118,353,003 (-)NCBI
GRCh374119,201,193 - 119,274,053 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011532387   ⟹   XP_011530689
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh384118,300,366 - 118,353,003 (-)NCBI
Sequence:
RefSeq Acc Id: XM_054351128   ⟹   XP_054207103
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.04121,608,030 - 121,657,983 (-)NCBI
RefSeq Acc Id: XM_054351129   ⟹   XP_054207104
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.04121,608,772 - 121,657,983 (-)NCBI
RefSeq Acc Id: NP_003610   ⟸   NM_003619
- Peptide Label: precursor
- UniProtKB: Q9UP16 (UniProtKB/Swiss-Prot),   P56730 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005263375   ⟸   XM_005263318
- Peptide Label: isoform X2
- UniProtKB: Q96I80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011530689   ⟸   XM_011532387
- Peptide Label: isoform X1
- UniProtKB: Q96I80 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000296498   ⟸   ENST00000296498
RefSeq Acc Id: XP_054207103   ⟸   XM_054351128
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054207104   ⟸   XM_054351129
- Peptide Label: isoform X2
Protein Domains
Kringle   Peptidase S1   SRCR

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P56730-F1-model_v2 AlphaFold P56730 1-875 view protein structure

Promoters
RGD ID:6868338
Promoter ID:EPDNEW_H7334
Type:initiation region
Name:PRSS12_2
Description:protease, serine 12
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H7335  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh384118,352,741 - 118,352,801EPDNEW
RGD ID:6868340
Promoter ID:EPDNEW_H7335
Type:initiation region
Name:PRSS12_1
Description:protease, serine 12
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H7334  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh384118,352,992 - 118,353,052EPDNEW
RGD ID:6812584
Promoter ID:HG_ACW:60666
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:PRSS12.EAPR07-UNSPLICED
Position:
Human AssemblyChrPosition (strand)Source
Build 364119,423,406 - 119,423,906 (-)MPROMDB
RGD ID:6802544
Promoter ID:HG_KWN:48976
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000256516
Position:
Human AssemblyChrPosition (strand)Source
Build 364119,493,484 - 119,493,984 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:9477 AgrOrtholog
COSMIC PRSS12 COSMIC
Ensembl Genes ENSG00000164099 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000296498 ENTREZGENE
  ENST00000296498.3 UniProtKB/Swiss-Prot
Gene3D-CATH 2.40.10.10 UniProtKB/Swiss-Prot
  2.40.20.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.10.250.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000164099 GTEx
HGNC ID HGNC:9477 ENTREZGENE
Human Proteome Map PRSS12 Human Proteome Map
InterPro Kringle UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kringle-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kringle_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kringle_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_S1_PA UniProtKB/Swiss-Prot
  Peptidase_S1_PA_chymotrypsin UniProtKB/Swiss-Prot
  Peptidase_S1A UniProtKB/Swiss-Prot
  SRCR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SRCR-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SRCR-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Trypsin_dom UniProtKB/Swiss-Prot
  TRYPSIN_HIS UniProtKB/Swiss-Prot
  TRYPSIN_SER UniProtKB/Swiss-Prot
KEGG Report hsa:8492 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 8492 ENTREZGENE
OMIM 606709 OMIM
PANTHER NEUROTRYPSIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SRCR DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Kringle UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SRCR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Trypsin UniProtKB/Swiss-Prot
PharmGKB PA33830 PharmGKB
PRINTS CHYMOTRYPSIN UniProtKB/Swiss-Prot
  SPERACTRCPTR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE KRINGLE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  KRINGLE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SRCR_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SRCR_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TRYPSIN_DOM UniProtKB/Swiss-Prot
  TRYPSIN_HIS UniProtKB/Swiss-Prot
  TRYPSIN_SER UniProtKB/Swiss-Prot
SMART SM00130 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00202 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Tryp_SPc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF50494 UniProtKB/Swiss-Prot
  SSF56487 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57440 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt NETR_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q96I80 ENTREZGENE, UniProtKB/TrEMBL
  Q9UP16 ENTREZGENE
UniProt Secondary Q9UP16 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-01-23 PRSS12  serine protease 12    protease, serine 12  Symbol and/or name change 5135510 APPROVED
2015-11-24 PRSS12  protease, serine 12    protease, serine, 12 (neurotrypsin, motopsin)  Symbol and/or name change 5135510 APPROVED