MARK2P15 (MARK2 pseudogene 15) - Rat Genome Database

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Gene: MARK2P15 (MARK2 pseudogene 15) Homo sapiens
Analyze
Symbol: MARK2P15
Name: MARK2 pseudogene 15
RGD ID: 7256147
HGNC Page HGNC:45119
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: microtubule affinity regulating kinase 2 pseudogene 15
Related Functional Gene: MARK2  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381083,312,369 - 83,314,451 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1083,311,628 - 83,314,475 (-)EnsemblGRCh38hg38GRCh38
GRCh371085,072,125 - 85,074,207 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map10q23.1NCBI
HuRef1078,919,363 - 78,921,445 (-)NCBIHuRef
CHM1_11085,353,946 - 85,356,028 (-)NCBICHM1_1
T2T-CHM13v2.01084,190,846 - 84,192,928 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:266
Count of miRNA genes:258
Interacting mature miRNAs:266
Transcripts:ENST00000432204
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 5 1
Below cutoff 35 57 48 10 31 2 104 44 109 8 286 49 8 16 68

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000432204
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1083,311,628 - 83,314,475 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC MARK2P15 COSMIC
Ensembl Genes ENSG00000234931 Ensembl
GTEx ENSG00000234931 GTEx
HGNC ID HGNC:45119 ENTREZGENE
Human Proteome Map MARK2P15 Human Proteome Map
NCBI Gene MARK2P15 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-10-31 MARK2P15  MARK2 pseudogene 15  MARK2P15  microtubule affinity regulating kinase 2 pseudogene 15  Symbol and/or name change 19259463 PROVISIONAL
2016-02-16 MARK2P15  microtubule affinity regulating kinase 2 pseudogene 15    MAP/microtubule affinity-regulating kinase 2 pseudogene 15  Symbol and/or name change 5135510 APPROVED