CES1P2 (carboxylesterase 1 pseudogene 2) - Rat Genome Database

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Gene: CES1P2 (carboxylesterase 1 pseudogene 2) Homo sapiens
Analyze
Symbol: CES1P2
Name: carboxylesterase 1 pseudogene 2
RGD ID: 7247532
HGNC Page HGNC:48928
Description: INTERACTS WITH malathion
Type: pseudo (Ensembl: unprocessed_pseudogene)
RefSeq Status: VALIDATED
Related Functional Gene: CES1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381655,724,925 - 55,750,211 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1655,728,115 - 55,750,111 (+)EnsemblGRCh38hg38GRCh38
GRCh371655,758,837 - 55,784,123 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361654,316,338 - 54,341,624 (+)NCBINCBI36Build 36hg18NCBI36
Celera1640,273,236 - 40,298,539 (+)NCBICelera
Cytogenetic Map16q12.2NCBI
HuRef1641,646,346 - 41,671,649 (+)NCBIHuRef
CHM1_11657,166,230 - 57,191,533 (+)NCBICHM1_1
T2T-CHM13v2.01661,523,205 - 61,548,506 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
COVID-19  (HEP)

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
malathion  (EXP)

References

References - curated
# Reference Title Reference Citation
1. Transcriptomic characteristics of bronchoalveolar lavage fluid and peripheral blood mononuclear cells in COVID-19 patients. Xiong Y, etal., Emerg Microbes Infect. 2020 Dec;9(1):761-770. doi: 10.1080/22221751.2020.1747363.

Genomics

Variants

.
Variants in CES1P2
9 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:258
Count of miRNA genes:246
Interacting mature miRNAs:258
Transcripts:ENST00000566467
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D16S2848  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371655,765,124 - 55,765,248UniSTSGRCh37
Build 361654,322,625 - 54,322,749RGDNCBI36
Celera1640,279,523 - 40,279,647RGD
Cytogenetic Map16q12.2UniSTS
HuRef1641,652,634 - 41,652,758UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium 37 3
Low 6 114 87 102 85 5 8 35 3 342 54 3
Below cutoff 949 1114 710 366 382 285 1759 665 748 44 346 662 87 652 1014

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000566467
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1655,728,115 - 55,750,111 (+)Ensembl
RefSeq Acc Id: NR_033740
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381655,724,925 - 55,750,211 (+)NCBI
GRCh371655,758,837 - 55,784,123 (+)NCBI
HuRef1641,646,346 - 41,671,649 (+)NCBI
CHM1_11657,166,230 - 57,191,533 (+)NCBI
T2T-CHM13v2.01661,523,205 - 61,548,506 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
COSMIC CES1P2 COSMIC
Ensembl Genes ENSG00000260765 Ensembl
GTEx ENSG00000260765 GTEx
HGNC ID HGNC:48928 ENTREZGENE
Human Proteome Map CES1P2 Human Proteome Map
NCBI Gene CES1P2 ENTREZGENE