Gm21977 (predicted gene 21977) - Rat Genome Database

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Gene: Gm21977 (predicted gene 21977) Mus musculus
Analyze
No known orthologs.
Symbol: Gm21977
Name: predicted gene 21977
RGD ID: 7182665
MGI Page MGI
Description:
Type: protein-coding (Ensembl: unprocessed_pseudogene)
RefSeq Status: VALIDATED
Previously known as: disks large homolog 5-like; uncharacterized protein LOC100504444
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391442,669,929 - 42,675,488 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1442,669,937 - 42,674,128 (-)EnsemblGRCm39 Ensembl
GRCm381442,839,761 - 42,853,531 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1442,847,980 - 42,853,477 (-)EnsemblGRCm38mm10GRCm38
MGSCv371443,428,697 - 43,432,274 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Cytogenetic Map14BNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:17610818  


Genomics

Variants

.
Variants in Gm21977
8 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300779Dyscalc4_mdystrophic cardiac calcinosis 4 (mouse)Not determined141221287146213007Mouse
27226748Femd8_mfemur midshaft diameter 8, 10 week (mouse)141376927346737457Mouse
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)141376927347237457Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000163725   ⟹   ENSMUSP00000127377
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1442,669,937 - 42,674,128 (-)Ensembl
GRCm38.p6 Ensembl1442,847,980 - 42,853,477 (-)Ensembl
RefSeq Acc Id: NM_001378726   ⟹   NP_001365655
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391442,669,929 - 42,675,488 (-)NCBI
GRCm381442,847,972 - 42,853,531 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036158328   ⟹   XP_036014221
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391442,670,015 - 42,675,482 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001365655 (Get FASTA)   NCBI Sequence Viewer  
  XP_036014221 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_001365655   ⟸   NM_001378726
- UniProtKB: F6VRJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000127377   ⟸   ENSMUST00000163725
RefSeq Acc Id: XP_036014221   ⟸   XM_036158328
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:5439446 AgrOrtholog
Ensembl Genes ENSMUSG00000094804 Ensembl
MGD MGI:5439446 ENTREZGENE
NCBI Gene Gm21977 ENTREZGENE
PhenoGen Gm21977 PhenoGen
UniProt F6VRJ8 ENTREZGENE